FastQCFastQC Report
Fri 10 Dec 2021
BCep_R2_paired.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameBCep_R2_paired.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1484739
Sequences flagged as poor quality0
Sequence length140
%GC66

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTATTA500.00893107626.7996580-81
GTAGGGA2050.004644344611.4392605130-131
GGAATAC6050.00783759456.090829466-67
GAGAACG19350.00122468445.19373043
Produced by FastQC (version 0.11.5)