rpoBC; DNA-directed RNA polymerase subunit beta-beta [EC:2.7.7.6]	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K13798	 rpoB; DNA-directed RNA polymerase subunit B [EC:2.7.7.6]	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K14400	 PCF11; pre-mRNA cleavage complex 2 protein Pcf11	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K14401	" CPSF1, CFT1; cleavage and polyadenylation specificity factor subunit 1"	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K14403	" CPSF3, YSH1; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]"	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K14404	" CPSF4, YTH1; cleavage and polyadenylation specificity factor subunit 4"	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K14535	 TAF9; transcription initiation factor TFIID subunit 9	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K14649	 TAF8; transcription initiation factor TFIID subunit 8	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K14650	 TAF3; transcription initiation factor TFIID subunit 3	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K14651	" TAF15, NPL3; transcription initiation factor TFIID subunit 15"	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K14721	" RPC5, POLR3E; DNA-directed RNA polymerase III subunit RPC5"	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K14845	" RAI1, DOM3Z; RAT1-interacting protein"	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15127	 TADA2B; transcriptional adapter 2-beta	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15128	 MED6; mediator of RNA polymerase II transcription subunit 6	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15129	 MED8; mediator of RNA polymerase II transcription subunit 8	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15130	" MED8; mediator of RNA polymerase II transcription subunit 8, fungi type"	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15131	 MED11; mediator of RNA polymerase II transcription subunit 11	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15132	" MED11; mediator of RNA polymerase II transcription subunit 11, fungi type"	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15133	 MED17; mediator of RNA polymerase II transcription subunit 17	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15134	" SRB4, MED17; mediator of RNA polymerase II transcription subunit 17, fungi type"	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15135	 MED18; mediator of RNA polymerase II transcription subunit 18	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15136	" SRB5, MED18; mediator of RNA polymerase II transcription subunit 18, fungi type"	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15137	 MED19; mediator of RNA polymerase II transcription subunit 19	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15138	" ROX3, MED19; mediator of RNA polymerase II transcription subunit 19, fungi type"	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15139	 MED22; mediator of RNA polymerase II transcription subunit 22	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15140	" SRB6, MED22; mediator of RNA polymerase II transcription subunit 22, fungi type"	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15141	 MED28; mediator of RNA polymerase II transcription subunit 28	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15142	 MED29; mediator of RNA polymerase II transcription subunit 29	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15143	 MED30; mediator of RNA polymerase II transcription subunit 30	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15144	 MED1; mediator of RNA polymerase II transcription subunit 1	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15145	" MED1; mediator of RNA polymerase II transcription subunit 1, fungi type"	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15146	 MED4; mediator of RNA polymerase II transcription subunit 4	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15147	" MED5, NUT1; mediator of RNA polymerase II transcription subunit 5"	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15148	 MED7; mediator of RNA polymerase II transcription subunit 7	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15149	 MED9; mediator of RNA polymerase II transcription subunit 9	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15150	" CSE2, MED9; mediator of RNA polymerase II transcription subunit 9, fungi type"	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15151	" MED10, NUT2; mediator of RNA polymerase II transcription subunit 10"	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15152	" MED21, SRB7; mediator of RNA polymerase II transcription subunit 21"	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15153	" MED31, SOH1; mediator of RNA polymerase II transcription subunit 31"	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15154	 MED2; mediator of RNA polymerase II transcription subunit 2	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15155	" MED3, HRS1, PGD1; mediator of RNA polymerase II transcription subunit 3"	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15156	" MED14, RGR1; mediator of RNA polymerase II transcription subunit 14"	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15157	 MED15; mediator of RNA polymerase II transcription subunit 15	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15158	" GAL11, MED15; mediator of RNA polymerase II transcription subunit 15, fungi type"	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15159	 MED16; mediator of RNA polymerase II transcription subunit 16	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15160	" SIN4, MED16; mediator of RNA polymerase II transcription subunit 16, fungi type"	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15161	" CCNC, SSN8; cyclin-C"	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15162	 MED12; mediator of RNA polymerase II transcription subunit 12	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15163	" SRB8, MED12; mediator of RNA polymerase II transcription subunit 12, fungi type"	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15164	 MED13; mediator of RNA polymerase II transcription subunit 13	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15165	" SSN2, MED13; mediator of RNA polymerase II transcription subunit 13, fungi type"	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15166	 MED23; mediator of RNA polymerase II transcription subunit 23	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15167	 MED24; mediator of RNA polymerase II transcription subunit 24	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15168	 MED25; mediator of RNA polymerase II transcription subunit 25	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15169	 MED26; mediator of RNA polymerase II transcription subunit 26	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15170	 MED27; mediator of RNA polymerase II transcription subunit 27	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15171	" SUPT4H1, SPT4; transcription elongation factor SPT4"	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15172	" SUPT5H, SPT5; transcription elongation factor SPT5"	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15173	 TTF2; transcription termination factor 2 [EC:5.6.2.-]	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15174	 PAF1; RNA polymerase II-associated factor 1	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15175	 CDC73; parafibromin	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15176	 CTR9; RNA polymerase-associated protein CTR9	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15177	 LEO1; RNA polymerase-associated protein LEO1	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15178	 RTF1; RNA polymerase-associated protein RTF1	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15179	" WHSC2, NELFA; negative elongation factor A"	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15180	" COBRA1, NELFB; negative elongation factor B"	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15181	" TH1L, NELFD; negative elongation factor C/D"	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15182	" RDBP, NELFE; negative elongation factor E"	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15183	 ELL; RNA polymerase II elongation factor ELL	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15184	 AFF1; AF4/FMR2 family member 1	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15185	 AFF4; AF4/FMR2 family member 4	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15186	 EAF; ELL-associated factor	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15187	" MLLT1_3, ENL, AF9; YEATS domain-containing protein 1/3"	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15188	 CCNT; cyclin T	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15189	 HEXIM1_2; protein HEXIM1/2	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15190	" MEPCE, BCDIN3; 7SK snRNA methylphosphate capping enzyme [EC:2.1.1.-]"	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15191	 LARP7; La-related protein 7	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15192	" BTAF1, MOT1; TATA-binding protein-associated factor [EC:5.6.2.-]"	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15193	" SPTY2D1, SPT2; protein SPT2"	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15194	 AFF2; AF4/FMR2 family member 2	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15195	 AFF3; AF4/FMR2 family member 3	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15196	" BRF1, GTF3B; transcription factor IIIB 90 kDa subunit"	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15197	 BRF2; transcription factor IIIB 50 kDa subunit	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15198	" BDP1, TFC5; transcription factor TFIIIB component B'"	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15199	 GTF3C1; general transcription factor 3C polypeptide 1	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15200	 GTF3C2; general transcription factor 3C polypeptide 2	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15201	" GTP3C3, TFC4; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)"	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15202	" GTF3C5, TFC1; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1)"	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15203	 GTF3C6; general transcription factor 3C polypeptide 6	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15204	 TFC3; transcription factor C subunit 3	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15205	 TFC6; transcription factor C subunit 6	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15206	 TFC7; transcription factor C subunit 7	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15207	 TFC8; transcription factor C subunit 8	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15208	 SNAPC1; snRNA-activating protein complex subunit 1	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15209	 SNAPC2; snRNA-activating protein complex subunit 2	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15210	 SNAPC3; snRNA-activating protein complex subunit 3	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15211	 SNAPC5; snRNA-activating protein complex subunit 5	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15212	" TAF1A, SL1; TATA box-binding protein-associated factor RNA polymerase I subunit A"	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15213	 TAF1B; TATA box-binding protein-associated factor RNA polymerase I subunit B	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15214	 TAF1C; TATA box-binding protein-associated factor RNA polymerase I subunit C	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15215	 TAF1D; TATA box-binding protein-associated factor RNA polymerase I subunit D	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15216	" RRN3, TIFIA; RNA polymerase I-specific transcription initiation factor RRN3"	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15217	 RRN5; RNA polymerase I-specific transcription initiation factor RRN5	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15218	 RRN6; RNA polymerase I-specific transcription initiation factor RRN6	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15219	 RRN7; RNA polymerase I-specific transcription initiation factor RRN7	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15220	 RRN9; RNA polymerase I-specific transcription initiation factor RRN9	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15221	 RRN10; RNA polymerase I-specific transcription initiation factor RRN10	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15222	 RRN11; RNA polymerase I-specific transcription initiation factor RRN11	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15223	" UAF30, SPP27; upstream activation factor subunit UAF30"	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15224	" BAZ2A, TIP5; bromodomain adjacent to zinc finger domain protein 2A"	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15225	 TTF1; transcription termination factor 1	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15544	 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15559	 RTT103; regulator of Ty1 transposition protein 103	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15560	 NRD1; protein NRD1	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15561	 NAB3; nuclear polyadenylated RNA-binding protein 3	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15562	" BUR1, SGV1; serine/threonine-protein kinase BUR1 [EC:2.7.11.22 2.7.11.23]"	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15563	 BUR2; protein BUR2	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15564	 CTK2; CTD kinase subunit beta	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15565	 CTK3; CTD kinase subunit gamma	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15731	 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16]	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K15732	" CTDP1, FCP1; RNA polymerase II subunit A C-terminal domain phosphatase [EC:3.1.3.16]"	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K16250	 NRPD1; DNA-directed RNA polymerase IV subunit 1 [EC:2.7.7.6]	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K16251	 NRPE1; DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6]	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K16252	" NRPD2, NRPE2; DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]"	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K16253	" NRPD7, NRPE7; DNA-directed RNA polymerase IV and V subunit 7"	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K17494	 CSRNP; cysteine/serine-rich nuclear protein	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K17498	" SPN1, IWS1; transcription factor SPN1"	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K17752	 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K17762	 rsbS; rsbT antagonist protein RsbS	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K17763	 rsbR; rsbT co-antagonist protein RsbR	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K18998	 CPL1_2; RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:3.1.3.16]	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K18999	 CPL3_4; RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16]	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K19000	 rof; Rho-binding antiterminator	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K19387	 PTRF; polymerase I and transcript release factor	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K19707	 rsbQ; sigma-B regulation protein RsbQ	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K20826	 RPAP1; RNA polymerase II-associated protein 1	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K20827	 RPAP2; RNA polymerase II-associated protein 2 [EC:3.1.3.16]	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K20828	" ZNF143_76, STAF; zinc finger protein 143/76"	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K21388	 AHR1; adhesion and hyphal regulator 1	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K21751	" DR1, NC2-beta; down-regulator of transcription 1"	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K21752	" DRAP1, NC2-alpha; Dr1-associated corepressor"	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K21987	" POLR2M, GRINL1A; DNA-directed RNA polymerase II subunit GRINL1A"	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K23002	 RPAP3; RNA polymerase II-associated protein 3	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K23326	 CCNK; cyclin K	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K23358	" TAF1; transcription initiation factor TFIID subunit 1, fungi type [EC:2.3.1.48]"	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K23514	" fecI, prhI; RNA polymerase sigma-19 factor, ECF subfamily"	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K24072	 xpf; positive control factor	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K24073	 cnrH; RNA polymerase sigma factor CnrH	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K24104	 GPN; GPN-loop GTPase	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K24388	 ZC3H8; zinc finger CCCH domain-containing protein 8	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K25304	" RPC9, CRCP; DNA-directed RNA polymerase III subunit RPC9"	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K25436	 POLR1G; DNA-directed RNA polymerase I subunit RPA34	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K25815	 SUB1; activated RNA polymerase II transcriptional coactivator p15	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K25816	" CCAR2, DBC1; cell cycle and apoptosis regulator protein 2"	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K25817	 MAF1; repressor of RNA polymerase III transcription MAF1	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K25818	 NOLC1; nucleolar and coiled-body phosphoprotein 1	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K25827	 CCAR1; cell division cycle and apoptosis regulator protein 1	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K25828	 CALCOCO1; calcium-binding and coiled-coil domain-containing protein 1	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K26143	 ICE1; little elongation complex subunit 1	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K26144	 ICE2; little elongation complex subunit 2	Transcription machinery [BR:ko03021]	Protein families: genetic information processing
K00554	 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]	Transfer RNA biogenesis [BR:ko03016]	Protein families: genetic information processing
K00555	" TRMT1, trm1; tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase [EC:2.1.1.215 2.1.1.216]"	Transfer RNA biogenesis [BR:ko03016]	Protein families: genetic information processing
K00556	 trmH; tRNA (guanosine-2-O-)-methyltransferase [EC:2.1.1.34]