TARA_SAMEA6034021_MAG_00000011 - 29 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

TARA_SAMEA6034021_MAG_00000011-scaffold_3

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	hglE-KS	69,485	118,994

TARA_SAMEA6034021_MAG_00000011-scaffold_4

Region	Type	From	To	Most similar known cluster		Similarity
Region 4.1	T1PKS,NRPS-like,NRPS	20,330	74,010

TARA_SAMEA6034021_MAG_00000011-scaffold_6

Region	Type	From	To	Most similar known cluster		Similarity
Region 6.1	NRPS	21,102	65,130

TARA_SAMEA6034021_MAG_00000011-scaffold_21

Region	Type	From	To	Most similar known cluster		Similarity
Region 21.1	NRPS	21,042	71,280

TARA_SAMEA6034021_MAG_00000011-scaffold_22

Region	Type	From	To	Most similar known cluster		Similarity
Region 22.1	terpene	38,871	59,821

TARA_SAMEA6034021_MAG_00000011-scaffold_25

Region	Type	From	To	Most similar known cluster		Similarity
Region 25.1	terpene	1	20,743

TARA_SAMEA6034021_MAG_00000011-scaffold_30

Region	Type	From	To	Most similar known cluster		Similarity
Region 30.1	RRE-containing	42,660	62,993

TARA_SAMEA6034021_MAG_00000011-scaffold_33

Region	Type	From	To	Most similar known cluster		Similarity
Region 33.1	RiPP-like	24,340	35,116

TARA_SAMEA6034021_MAG_00000011-scaffold_35

Region	Type	From	To	Most similar known cluster		Similarity
Region 35.1	NRPS	31,438	58,140

TARA_SAMEA6034021_MAG_00000011-scaffold_57

Region	Type	From	To	Most similar known cluster		Similarity
Region 57.1	NRPS-like	26,134	48,082

TARA_SAMEA6034021_MAG_00000011-scaffold_59

Region	Type	From	To	Most similar known cluster		Similarity
Region 59.1	NRPS,T1PKS,NRPS-like	1	46,101

TARA_SAMEA6034021_MAG_00000011-scaffold_90

Region	Type	From	To	Most similar known cluster		Similarity
Region 90.1	terpene	4,802	25,746

TARA_SAMEA6034021_MAG_00000011-scaffold_92

Region	Type	From	To	Most similar known cluster		Similarity
Region 92.1	T1PKS,NRPS	1	35,649

TARA_SAMEA6034021_MAG_00000011-scaffold_93

Region	Type	From	To	Most similar known cluster		Similarity
Region 93.1	RiPP-like	25,840	35,495

TARA_SAMEA6034021_MAG_00000011-scaffold_94

Region	Type	From	To	Most similar known cluster		Similarity
Region 94.1	terpene	1	17,721

TARA_SAMEA6034021_MAG_00000011-scaffold_95

Region	Type	From	To	Most similar known cluster		Similarity
Region 95.1	NRPS,T1PKS	1	34,782

TARA_SAMEA6034021_MAG_00000011-scaffold_116

Region	Type	From	To	Most similar known cluster		Similarity
Region 116.1	NRPS,T1PKS	1	29,298

TARA_SAMEA6034021_MAG_00000011-scaffold_120

Region	Type	From	To	Most similar known cluster		Similarity
Region 120.1	NRPS	1	27,843

TARA_SAMEA6034021_MAG_00000011-scaffold_133

Region	Type	From	To	Most similar known cluster		Similarity
Region 133.1	lanthipeptide-class-ii	1	15,596

TARA_SAMEA6034021_MAG_00000011-scaffold_146

Region	Type	From	To	Most similar known cluster		Similarity
Region 146.1	NRPS-like	1	22,847

TARA_SAMEA6034021_MAG_00000011-scaffold_148

Region	Type	From	To	Most similar known cluster		Similarity
Region 148.1	T3PKS	1	22,663

TARA_SAMEA6034021_MAG_00000011-scaffold_164

Region	Type	From	To	Most similar known cluster		Similarity
Region 164.1	NRPS	1	19,056

TARA_SAMEA6034021_MAG_00000011-scaffold_176

Region	Type	From	To	Most similar known cluster		Similarity
Region 176.1	T1PKS	1	16,927

TARA_SAMEA6034021_MAG_00000011-scaffold_183

Region	Type	From	To	Most similar known cluster		Similarity
Region 183.1	NRPS	1	15,600

TARA_SAMEA6034021_MAG_00000011-scaffold_186

Region	Type	From	To	Most similar known cluster		Similarity
Region 186.1	RiPP-like	2,143	14,188

TARA_SAMEA6034021_MAG_00000011-scaffold_189

Region	Type	From	To	Most similar known cluster		Similarity
Region 189.1	NRPS,T1PKS	1	14,862

TARA_SAMEA6034021_MAG_00000011-scaffold_227

Region	Type	From	To	Most similar known cluster		Similarity
Region 227.1	T1PKS	1	10,414

TARA_SAMEA6034021_MAG_00000011-scaffold_231

Region	Type	From	To	Most similar known cluster		Similarity
Region 231.1	NRPS	1	10,055

TARA_SAMEA6034021_MAG_00000011-scaffold_248

Region	Type	From	To	Most similar known cluster		Similarity
Region 248.1	NRPS-like	1	7,813

Region	Type	From	To	Similarity
Region 3.1	hglE-KS	69,485	118,994
Region 4.1	T1PKS,NRPS-like,NRPS	20,330	74,010
Region 6.1	NRPS	21,102	65,130
Region 21.1	NRPS	21,042	71,280
Region 22.1	terpene	38,871	59,821
Region 25.1	terpene	1	20,743
Region 30.1	RRE-containing	42,660	62,993
Region 33.1	RiPP-like	24,340	35,116
Region 35.1	NRPS	31,438	58,140
Region 57.1	NRPS-like	26,134	48,082
Region 59.1	NRPS,T1PKS,NRPS-like	1	46,101
Region 90.1	terpene	4,802	25,746
Region 92.1	T1PKS,NRPS	1	35,649
Region 93.1	RiPP-like	25,840	35,495
Region 94.1	terpene	1	17,721
Region 95.1	NRPS,T1PKS	1	34,782
Region 116.1	NRPS,T1PKS	1	29,298
Region 120.1	NRPS	1	27,843
Region 133.1	lanthipeptide-class-ii	1	15,596
Region 146.1	NRPS-like	1	22,847
Region 148.1	T3PKS	1	22,663
Region 164.1	NRPS	1	19,056
Region 176.1	T1PKS	1	16,927
Region 183.1	NRPS	1	15,600
Region 186.1	RiPP-like	2,143	14,188
Region 189.1	NRPS,T1PKS	1	14,862
Region 227.1	T1PKS	1	10,414
Region 231.1	NRPS	1	10,055
Region 248.1	NRPS-like	1	7,813

No secondary metabolite regions were found in these records:: TARA_SAMEA6034021_MAG_00000011-scaffold_1; TARA_SAMEA6034021_MAG_00000011-scaffold_2; TARA_SAMEA6034021_MAG_00000011-scaffold_5; TARA_SAMEA6034021_MAG_00000011-scaffold_7; TARA_SAMEA6034021_MAG_00000011-scaffold_8; TARA_SAMEA6034021_MAG_00000011-scaffold_9; TARA_SAMEA6034021_MAG_00000011-scaffold_10; TARA_SAMEA6034021_MAG_00000011-scaffold_11; TARA_SAMEA6034021_MAG_00000011-scaffold_12; TARA_SAMEA6034021_MAG_00000011-scaffold_13; TARA_SAMEA6034021_MAG_00000011-scaffold_14; TARA_SAMEA6034021_MAG_00000011-scaffold_15; TARA_SAMEA6034021_MAG_00000011-scaffold_16; TARA_SAMEA6034021_MAG_00000011-scaffold_17; TARA_SAMEA6034021_MAG_00000011-scaffold_18; TARA_SAMEA6034021_MAG_00000011-scaffold_19; TARA_SAMEA6034021_MAG_00000011-scaffold_20; TARA_SAMEA6034021_MAG_00000011-scaffold_23; TARA_SAMEA6034021_MAG_00000011-scaffold_24; TARA_SAMEA6034021_MAG_00000011-scaffold_26; TARA_SAMEA6034021_MAG_00000011-scaffold_27; TARA_SAMEA6034021_MAG_00000011-scaffold_28; TARA_SAMEA6034021_MAG_00000011-scaffold_29; TARA_SAMEA6034021_MAG_00000011-scaffold_31; TARA_SAMEA6034021_MAG_00000011-scaffold_32; TARA_SAMEA6034021_MAG_00000011-scaffold_34; TARA_SAMEA6034021_MAG_00000011-scaffold_36; TARA_SAMEA6034021_MAG_00000011-scaffold_37; TARA_SAMEA6034021_MAG_00000011-scaffold_38; TARA_SAMEA6034021_MAG_00000011-scaffold_39; TARA_SAMEA6034021_MAG_00000011-scaffold_40; TARA_SAMEA6034021_MAG_00000011-scaffold_41; TARA_SAMEA6034021_MAG_00000011-scaffold_42; TARA_SAMEA6034021_MAG_00000011-scaffold_43; TARA_SAMEA6034021_MAG_00000011-scaffold_44; TARA_SAMEA6034021_MAG_00000011-scaffold_45; TARA_SAMEA6034021_MAG_00000011-scaffold_46; TARA_SAMEA6034021_MAG_00000011-scaffold_47; TARA_SAMEA6034021_MAG_00000011-scaffold_48; TARA_SAMEA6034021_MAG_00000011-scaffold_49; TARA_SAMEA6034021_MAG_00000011-scaffold_50; TARA_SAMEA6034021_MAG_00000011-scaffold_51; TARA_SAMEA6034021_MAG_00000011-scaffold_52; TARA_SAMEA6034021_MAG_00000011-scaffold_53; TARA_SAMEA6034021_MAG_00000011-scaffold_54; TARA_SAMEA6034021_MAG_00000011-scaffold_55; TARA_SAMEA6034021_MAG_00000011-scaffold_56; TARA_SAMEA6034021_MAG_00000011-scaffold_58; TARA_SAMEA6034021_MAG_00000011-scaffold_60; TARA_SAMEA6034021_MAG_00000011-scaffold_61; TARA_SAMEA6034021_MAG_00000011-scaffold_62; TARA_SAMEA6034021_MAG_00000011-scaffold_63; TARA_SAMEA6034021_MAG_00000011-scaffold_64; TARA_SAMEA6034021_MAG_00000011-scaffold_65; TARA_SAMEA6034021_MAG_00000011-scaffold_66; TARA_SAMEA6034021_MAG_00000011-scaffold_67; TARA_SAMEA6034021_MAG_00000011-scaffold_68; TARA_SAMEA6034021_MAG_00000011-scaffold_69; TARA_SAMEA6034021_MAG_00000011-scaffold_70; TARA_SAMEA6034021_MAG_00000011-scaffold_71; TARA_SAMEA6034021_MAG_00000011-scaffold_72; TARA_SAMEA6034021_MAG_00000011-scaffold_73; TARA_SAMEA6034021_MAG_00000011-scaffold_74; TARA_SAMEA6034021_MAG_00000011-scaffold_75; TARA_SAMEA6034021_MAG_00000011-scaffold_76; TARA_SAMEA6034021_MAG_00000011-scaffold_77; TARA_SAMEA6034021_MAG_00000011-scaffold_78; TARA_SAMEA6034021_MAG_00000011-scaffold_79; TARA_SAMEA6034021_MAG_00000011-scaffold_80; TARA_SAMEA6034021_MAG_00000011-scaffold_81; TARA_SAMEA6034021_MAG_00000011-scaffold_82; TARA_SAMEA6034021_MAG_00000011-scaffold_83; TARA_SAMEA6034021_MAG_00000011-scaffold_84; TARA_SAMEA6034021_MAG_00000011-scaffold_85; TARA_SAMEA6034021_MAG_00000011-scaffold_86; TARA_SAMEA6034021_MAG_00000011-scaffold_87; TARA_SAMEA6034021_MAG_00000011-scaffold_88; TARA_SAMEA6034021_MAG_00000011-scaffold_89; TARA_SAMEA6034021_MAG_00000011-scaffold_91; TARA_SAMEA6034021_MAG_00000011-scaffold_96; TARA_SAMEA6034021_MAG_00000011-scaffold_97; TARA_SAMEA6034021_MAG_00000011-scaffold_98; TARA_SAMEA6034021_MAG_00000011-scaffold_99; TARA_SAMEA6034021_MAG_00000011-scaffold_100; TARA_SAMEA6034021_MAG_00000011-scaffold_101; TARA_SAMEA6034021_MAG_00000011-scaffold_102; TARA_SAMEA6034021_MAG_00000011-scaffold_103; TARA_SAMEA6034021_MAG_00000011-scaffold_104; TARA_SAMEA6034021_MAG_00000011-scaffold_105; TARA_SAMEA6034021_MAG_00000011-scaffold_106; TARA_SAMEA6034021_MAG_00000011-scaffold_107; TARA_SAMEA6034021_MAG_00000011-scaffold_108; TARA_SAMEA6034021_MAG_00000011-scaffold_109; TARA_SAMEA6034021_MAG_00000011-scaffold_110; TARA_SAMEA6034021_MAG_00000011-scaffold_111; TARA_SAMEA6034021_MAG_00000011-scaffold_112; TARA_SAMEA6034021_MAG_00000011-scaffold_113; TARA_SAMEA6034021_MAG_00000011-scaffold_114; TARA_SAMEA6034021_MAG_00000011-scaffold_115; TARA_SAMEA6034021_MAG_00000011-scaffold_117; TARA_SAMEA6034021_MAG_00000011-scaffold_118; TARA_SAMEA6034021_MAG_00000011-scaffold_119; TARA_SAMEA6034021_MAG_00000011-scaffold_121; TARA_SAMEA6034021_MAG_00000011-scaffold_122; TARA_SAMEA6034021_MAG_00000011-scaffold_123; TARA_SAMEA6034021_MAG_00000011-scaffold_124; TARA_SAMEA6034021_MAG_00000011-scaffold_125; TARA_SAMEA6034021_MAG_00000011-scaffold_126; TARA_SAMEA6034021_MAG_00000011-scaffold_127; TARA_SAMEA6034021_MAG_00000011-scaffold_128; TARA_SAMEA6034021_MAG_00000011-scaffold_129; TARA_SAMEA6034021_MAG_00000011-scaffold_130; TARA_SAMEA6034021_MAG_00000011-scaffold_131; TARA_SAMEA6034021_MAG_00000011-scaffold_132; TARA_SAMEA6034021_MAG_00000011-scaffold_134; TARA_SAMEA6034021_MAG_00000011-scaffold_135; TARA_SAMEA6034021_MAG_00000011-scaffold_136; TARA_SAMEA6034021_MAG_00000011-scaffold_137; TARA_SAMEA6034021_MAG_00000011-scaffold_138; TARA_SAMEA6034021_MAG_00000011-scaffold_139; TARA_SAMEA6034021_MAG_00000011-scaffold_140; TARA_SAMEA6034021_MAG_00000011-scaffold_141; TARA_SAMEA6034021_MAG_00000011-scaffold_142; TARA_SAMEA6034021_MAG_00000011-scaffold_143; TARA_SAMEA6034021_MAG_00000011-scaffold_144; TARA_SAMEA6034021_MAG_00000011-scaffold_145; TARA_SAMEA6034021_MAG_00000011-scaffold_147; TARA_SAMEA6034021_MAG_00000011-scaffold_149; TARA_SAMEA6034021_MAG_00000011-scaffold_150; TARA_SAMEA6034021_MAG_00000011-scaffold_151; TARA_SAMEA6034021_MAG_00000011-scaffold_152; TARA_SAMEA6034021_MAG_00000011-scaffold_153; TARA_SAMEA6034021_MAG_00000011-scaffold_154; TARA_SAMEA6034021_MAG_00000011-scaffold_155; TARA_SAMEA6034021_MAG_00000011-scaffold_156; TARA_SAMEA6034021_MAG_00000011-scaffold_157; TARA_SAMEA6034021_MAG_00000011-scaffold_158; TARA_SAMEA6034021_MAG_00000011-scaffold_159; TARA_SAMEA6034021_MAG_00000011-scaffold_160; TARA_SAMEA6034021_MAG_00000011-scaffold_161; TARA_SAMEA6034021_MAG_00000011-scaffold_162; TARA_SAMEA6034021_MAG_00000011-scaffold_163; TARA_SAMEA6034021_MAG_00000011-scaffold_165; TARA_SAMEA6034021_MAG_00000011-scaffold_166; TARA_SAMEA6034021_MAG_00000011-scaffold_167; TARA_SAMEA6034021_MAG_00000011-scaffold_168; TARA_SAMEA6034021_MAG_00000011-scaffold_169; TARA_SAMEA6034021_MAG_00000011-scaffold_170; TARA_SAMEA6034021_MAG_00000011-scaffold_171; TARA_SAMEA6034021_MAG_00000011-scaffold_172; TARA_SAMEA6034021_MAG_00000011-scaffold_173; TARA_SAMEA6034021_MAG_00000011-scaffold_174; TARA_SAMEA6034021_MAG_00000011-scaffold_175; TARA_SAMEA6034021_MAG_00000011-scaffold_177; TARA_SAMEA6034021_MAG_00000011-scaffold_178; TARA_SAMEA6034021_MAG_00000011-scaffold_179; TARA_SAMEA6034021_MAG_00000011-scaffold_180; TARA_SAMEA6034021_MAG_00000011-scaffold_181; TARA_SAMEA6034021_MAG_00000011-scaffold_182; TARA_SAMEA6034021_MAG_00000011-scaffold_184; TARA_SAMEA6034021_MAG_00000011-scaffold_185; TARA_SAMEA6034021_MAG_00000011-scaffold_187; TARA_SAMEA6034021_MAG_00000011-scaffold_188; TARA_SAMEA6034021_MAG_00000011-scaffold_190; TARA_SAMEA6034021_MAG_00000011-scaffold_191; TARA_SAMEA6034021_MAG_00000011-scaffold_192; TARA_SAMEA6034021_MAG_00000011-scaffold_193; TARA_SAMEA6034021_MAG_00000011-scaffold_194; TARA_SAMEA6034021_MAG_00000011-scaffold_195; TARA_SAMEA6034021_MAG_00000011-scaffold_196; TARA_SAMEA6034021_MAG_00000011-scaffold_197; TARA_SAMEA6034021_MAG_00000011-scaffold_198; TARA_SAMEA6034021_MAG_00000011-scaffold_199; TARA_SAMEA6034021_MAG_00000011-scaffold_200; TARA_SAMEA6034021_MAG_00000011-scaffold_201; TARA_SAMEA6034021_MAG_00000011-scaffold_202; TARA_SAMEA6034021_MAG_00000011-scaffold_203; TARA_SAMEA6034021_MAG_00000011-scaffold_204; TARA_SAMEA6034021_MAG_00000011-scaffold_205; TARA_SAMEA6034021_MAG_00000011-scaffold_206; TARA_SAMEA6034021_MAG_00000011-scaffold_207; TARA_SAMEA6034021_MAG_00000011-scaffold_208; TARA_SAMEA6034021_MAG_00000011-scaffold_209; TARA_SAMEA6034021_MAG_00000011-scaffold_210; TARA_SAMEA6034021_MAG_00000011-scaffold_211; TARA_SAMEA6034021_MAG_00000011-scaffold_212; TARA_SAMEA6034021_MAG_00000011-scaffold_213; TARA_SAMEA6034021_MAG_00000011-scaffold_214; TARA_SAMEA6034021_MAG_00000011-scaffold_215; TARA_SAMEA6034021_MAG_00000011-scaffold_216; TARA_SAMEA6034021_MAG_00000011-scaffold_217; TARA_SAMEA6034021_MAG_00000011-scaffold_218; TARA_SAMEA6034021_MAG_00000011-scaffold_219; TARA_SAMEA6034021_MAG_00000011-scaffold_220; TARA_SAMEA6034021_MAG_00000011-scaffold_221; TARA_SAMEA6034021_MAG_00000011-scaffold_222; TARA_SAMEA6034021_MAG_00000011-scaffold_223; TARA_SAMEA6034021_MAG_00000011-scaffold_224; TARA_SAMEA6034021_MAG_00000011-scaffold_225; TARA_SAMEA6034021_MAG_00000011-scaffold_226; TARA_SAMEA6034021_MAG_00000011-scaffold_228; TARA_SAMEA6034021_MAG_00000011-scaffold_229; TARA_SAMEA6034021_MAG_00000011-scaffold_230; TARA_SAMEA6034021_MAG_00000011-scaffold_232; TARA_SAMEA6034021_MAG_00000011-scaffold_233; TARA_SAMEA6034021_MAG_00000011-scaffold_234; TARA_SAMEA6034021_MAG_00000011-scaffold_235; TARA_SAMEA6034021_MAG_00000011-scaffold_236; TARA_SAMEA6034021_MAG_00000011-scaffold_237; TARA_SAMEA6034021_MAG_00000011-scaffold_238; TARA_SAMEA6034021_MAG_00000011-scaffold_239; TARA_SAMEA6034021_MAG_00000011-scaffold_240; TARA_SAMEA6034021_MAG_00000011-scaffold_241; TARA_SAMEA6034021_MAG_00000011-scaffold_242; TARA_SAMEA6034021_MAG_00000011-scaffold_243; TARA_SAMEA6034021_MAG_00000011-scaffold_244; TARA_SAMEA6034021_MAG_00000011-scaffold_245; TARA_SAMEA6034021_MAG_00000011-scaffold_246; TARA_SAMEA6034021_MAG_00000011-scaffold_247; TARA_SAMEA6034021_MAG_00000011-scaffold_249; TARA_SAMEA6034021_MAG_00000011-scaffold_250; TARA_SAMEA6034021_MAG_00000011-scaffold_251; TARA_SAMEA6034021_MAG_00000011-scaffold_252; TARA_SAMEA6034021_MAG_00000011-scaffold_253; TARA_SAMEA6034021_MAG_00000011-scaffold_254; TARA_SAMEA6034021_MAG_00000011-scaffold_255; TARA_SAMEA6034021_MAG_00000011-scaffold_256; TARA_SAMEA6034021_MAG_00000011-scaffold_257; TARA_SAMEA6034021_MAG_00000011-scaffold_258; TARA_SAMEA6034021_MAG_00000011-scaffold_259; TARA_SAMEA6034021_MAG_00000011-scaffold_260; TARA_SAMEA6034021_MAG_00000011-scaffold_261; TARA_SAMEA6034021_MAG_00000011-scaffold_262; TARA_SAMEA6034021_MAG_00000011-scaffold_263; TARA_SAMEA6034021_MAG_00000011-scaffold_264; TARA_SAMEA6034021_MAG_00000011-scaffold_265; TARA_SAMEA6034021_MAG_00000011-scaffold_266; TARA_SAMEA6034021_MAG_00000011-scaffold_267; TARA_SAMEA6034021_MAG_00000011-scaffold_268; TARA_SAMEA6034021_MAG_00000011-scaffold_269; TARA_SAMEA6034021_MAG_00000011-scaffold_270

Compact view

TARA_SAMEA6034021_MAG_00000011-scaffold_3 - Region 1 - hglE-KS

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Location: 69,485 - 118,994 nt. (total: 49,510 nt) Show pHMM detection rules used

hglE-KS: (hglE or hglD)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

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Gene details

Select a gene to view the details available for it

NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

TARA_SAMEA6034021_MAG_00000011-scaffold_4 - Region 1 - NRPS,NRPS-like,T1PKS

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Location: 20,330 - 74,010 nt. (total: 53,681 nt) Show pHMM detection rules used

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))
NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))
NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

NRPS/PKS modules

Detailed domain annotation

Selected features only

Show module domains

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 20329 - 74010:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (pk) + (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6034021_MAG_00000011-scaffold_4_31

Search NORINE for peptide: strict or relaxed

AMP-binding (8..403): X

NRPSPredictor2: (unknown)

SVM prediction details:

NOTE: outside applicability domain

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: hcnFfAGpFK
Nearest Stachelhaus code:: iva
Stachelhaus code match:: 50% (weak)

TARA_SAMEA6034021_MAG_00000011-scaffold_4_33

CAL_domain (49..494): pk

minowa: Acetyl-CoA

Prediction, score:

Acetyl-CoA: 46.2
NH2: 35.7
AHBA: 14.7
shikimic_acid: 0.0
fatty_acid: 0.0

PKS_AT (1220..1517): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 70.8%; Methylmalonyl-CoA: 62.5%; Ethylmalonyl-CoA: 58.3%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 122.1
Ethylmalonyl-CoA: 98.0
Methoxymalonyl-CoA: 89.6
Malonyl-CoA: 87.4
Isobutyryl-CoA: 81.0
Propionyl-CoA: 70.9
Benzoyl-CoA: 70.3
2-Methylbutyryl-CoA: 66.2
Acetyl-CoA: 62.2
CHC-CoA: 58.3
trans-1,2-CPDA: 54.5
inactive: 33.6
fatty_acid: 24.8
3-Methylbutyryl-CoA: 20.5

TARA_SAMEA6034021_MAG_00000011-scaffold_4_34

Search NORINE for peptide: strict or relaxed

AMP-binding (521..921): X

NRPSPredictor2: hydrophobic-aliphatic

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DVayFSLIhK
Nearest Stachelhaus code:: ser
Stachelhaus code match:: 70% (weak)

TARA_SAMEA6034021_MAG_00000011-scaffold_4_35

PKS_AT (535..824): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 70.8%; inactive: 62.5%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 104.8
inactive: 88.0
Methoxymalonyl-CoA: 38.3
Methylmalonyl-CoA: 24.4
Isobutyryl-CoA: 13.7
trans-1,2-CPDA: 0.0
fatty_acid: 0.0
Propionyl-CoA: 0.0
Ethylmalonyl-CoA: 0.0
CHC-CoA: 0.0
Benzoyl-CoA: 0.0
Acetyl-CoA: 0.0
3-Methylbutyryl-CoA: 0.0
2-Methylbutyryl-CoA: 0.0

TARA_SAMEA6034021_MAG_00000011-scaffold_4_36

Search NORINE for peptide: strict or relaxed

AMP-binding (37..427): X

NRPSPredictor2: val, leu, ile, abu, iva

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DtFlLGigvK
Nearest Stachelhaus code:: leu
Stachelhaus code match:: 50% (weak)

TARA_SAMEA6034021_MAG_00000011-scaffold_6 - Region 1 - NRPS

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Location: 21,102 - 65,130 nt. (total: 44,029 nt) Show pHMM detection rules used

NRPS: cds(Condensation and (AMP-binding or A-OX))

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NRPS/PKS domains

NRPS/PKS modules

Detailed domain annotation

Selected features only

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NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 21101 - 65130:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6034021_MAG_00000011-scaffold_6_37

Search NORINE for peptide: strict or relaxed

AMP-binding (472..872): X

NRPSPredictor2: asp, asn, glu, gln, aad

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAeDIGtVvK
Nearest Stachelhaus code:: glu
Stachelhaus code match:: 70% (weak)

TARA_SAMEA6034021_MAG_00000011-scaffold_6_39

Search NORINE for peptide: strict or relaxed

AMP-binding (31..435): dhb

NRPSPredictor2: dhb

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aromatic
Large clusters prediction:: dhb, sal
Small clusters prediction:: dhb, sal
Single AA prediction:: dhb

Stachelhaus prediction details:

Stachelhaus sequence:: PLPAQGVVNK
Nearest Stachelhaus code:: dhb
Stachelhaus code match:: 100% (strong)

TARA_SAMEA6034021_MAG_00000011-scaffold_21 - Region 1 - NRPS

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Location: 21,042 - 71,280 nt. (total: 50,239 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

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NRPS/PKS domains

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NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 21041 - 71280:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (D-ala - D-val - D-X - leu) + (D-leu - orn - D-ala)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6034021_MAG_00000011-scaffold_21_37

Search NORINE for peptide: strict or relaxed

AMP-binding (1187..1581): leu

NRPSPredictor2: leu

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: leu

Stachelhaus prediction details:

Stachelhaus sequence:: DAWFLGNVVK
Nearest Stachelhaus code:: leu
Stachelhaus code match:: 100% (strong)

AMP-binding (2714..3119): orn

NRPSPredictor2: orn

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: orn, lys, arg
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DVGEIGSIDK
Nearest Stachelhaus code:: orn
Stachelhaus code match:: 100% (strong)

TARA_SAMEA6034021_MAG_00000011-scaffold_21_38

Search NORINE for peptide: strict or relaxed

AMP-binding (542..871): ala

NRPSPredictor2: ala

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: gly, ala
Single AA prediction:: ala

Stachelhaus prediction details:

Stachelhaus sequence:: DLFNNALTYK
Nearest Stachelhaus code:: ala
Stachelhaus code match:: 100% (strong)

TARA_SAMEA6034021_MAG_00000011-scaffold_21_39

Search NORINE for peptide: strict or relaxed

AMP-binding (373..762): ala

NRPSPredictor2: ala

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: gly, ala
Single AA prediction:: ala

Stachelhaus prediction details:

Stachelhaus sequence:: DLFNNALTYK
Nearest Stachelhaus code:: ala
Stachelhaus code match:: 100% (strong)

AMP-binding (1906..2307): val

NRPSPredictor2: val

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: val

Stachelhaus prediction details:

Stachelhaus sequence:: DALWLGGTFK
Nearest Stachelhaus code:: val
Stachelhaus code match:: 100% (strong)

AMP-binding (3436..3841): X

NRPSPredictor2: asp, asn, glu, gln, aad

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DTEdiGTviK
Nearest Stachelhaus code:: lys-b
Stachelhaus code match:: 60% (weak)

AMP-binding (4989..5376): leu

NRPSPredictor2: leu

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: leu

Stachelhaus prediction details:

Stachelhaus sequence:: DAiyLGNViK
Nearest Stachelhaus code:: leu
Stachelhaus code match:: 70% (weak)

TARA_SAMEA6034021_MAG_00000011-scaffold_22 - Region 1 - terpene

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Location: 38,871 - 59,821 nt. (total: 20,951 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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TARA_SAMEA6034021_MAG_00000011-scaffold_25 - Region 1 - terpene

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Location: 1 - 20,743 nt. (total: 20,743 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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TARA_SAMEA6034021_MAG_00000011-scaffold_30 - Region 1 - RRE-containing

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Location: 42,660 - 62,993 nt. (total: 20,334 nt) Show pHMM detection rules used

Region on contig edge.

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

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TARA_SAMEA6034021_MAG_00000011-scaffold_33 - Region 1 - RiPP-like

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Location: 24,340 - 35,116 nt. (total: 10,777 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

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TARA_SAMEA6034021_MAG_00000011-scaffold_35 - Region 1 - NRPS

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Location: 31,438 - 58,140 nt. (total: 26,703 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

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core biosynthetic genes

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NRPS/PKS domains

NRPS/PKS modules

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NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 31437 - 58140:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (gly)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6034021_MAG_00000011-scaffold_35_47

Search NORINE for peptide: strict or relaxed

AMP-binding (513..908): gly

NRPSPredictor2: gly

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: gly, ala
Single AA prediction:: gly

Stachelhaus prediction details:

Stachelhaus sequence:: DILQLGMIWK
Nearest Stachelhaus code:: gly
Stachelhaus code match:: 100% (strong)

TARA_SAMEA6034021_MAG_00000011-scaffold_57 - Region 1 - NRPS-like

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Location: 26,134 - 48,082 nt. (total: 21,949 nt) Show pHMM detection rules used

Region on contig edge.

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

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NRPS/PKS domains

Detailed domain annotation

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TARA_SAMEA6034021_MAG_00000011-scaffold_59 - Region 1 - NRPS,NRPS-like,T1PKS

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Location: 1 - 46,101 nt. (total: 46,101 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))
T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))
NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

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Detailed domain annotation

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NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 46101:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X - ala) + (leu) + (gly) + (ala) + (X) + (ohmal) + (ohmal) + (ohmal) + (bht) + (ala)

Direct lookup in NORINE database: strict or relaxed

For candidate cluster 2, location 92 - 18178:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (ohmal) + (ohmal) + (bht) + (ala)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6034021_MAG_00000011-scaffold_59_1

Search NORINE for peptide: strict or relaxed

AMP-binding (6..397): ala

NRPSPredictor2: ala

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: gly, ala
Single AA prediction:: ala

Stachelhaus prediction details:

Stachelhaus sequence:: DLFNNALTYK
Nearest Stachelhaus code:: ala
Stachelhaus code match:: 100% (strong)

TARA_SAMEA6034021_MAG_00000011-scaffold_59_2

Search NORINE for peptide: strict or relaxed

CAL_domain (46..493): pk

minowa: NH2

Prediction, score:

NH2: 188.6
fatty_acid: 19.1
AHBA: 10.9
Acetyl-CoA: 3.7
shikimic_acid: 0.0

AMP-binding (1177..1573): bht

NRPSPredictor2: bht

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aromatic
Large clusters prediction:: phe, trp, phg, tyr, bht
Small clusters prediction:: N/A
Single AA prediction:: bht

Stachelhaus prediction details:

Stachelhaus sequence:: asGsLGGVCK
Nearest Stachelhaus code:: val
Stachelhaus code match:: 70% (weak)

TARA_SAMEA6034021_MAG_00000011-scaffold_59_3

PKS_AT (532..828): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 91.7%; inactive: 87.5%; 2-Rhyd-Malonyl-CoA: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 188.6
inactive: 116.9
Methoxymalonyl-CoA: 72.0
Methylmalonyl-CoA: 55.0
Propionyl-CoA: 54.3
2-Methylbutyryl-CoA: 35.6
Isobutyryl-CoA: 33.3
Ethylmalonyl-CoA: 32.4
Benzoyl-CoA: 31.4
CHC-CoA: 24.7
Acetyl-CoA: 18.1
trans-1,2-CPDA: 9.1
fatty_acid: 0.0
3-Methylbutyryl-CoA: 0.0

TARA_SAMEA6034021_MAG_00000011-scaffold_59_4

PKS_AT (531..827): mal

ATSignature: Malonyl-CoA, inactive

Top 3 matches:: Malonyl-CoA: 95.8%; inactive: 95.8%; 2-Rhyd-Malonyl-CoA: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 182.8
inactive: 148.7
Methoxymalonyl-CoA: 71.6
Methylmalonyl-CoA: 65.7
Propionyl-CoA: 48.8
2-Methylbutyryl-CoA: 29.3
Benzoyl-CoA: 28.8
Isobutyryl-CoA: 27.3
Ethylmalonyl-CoA: 27.0
CHC-CoA: 19.9
trans-1,2-CPDA: 12.5
3-Methylbutyryl-CoA: 11.6
fatty_acid: 9.4
Acetyl-CoA: 8.3

TARA_SAMEA6034021_MAG_00000011-scaffold_59_5

PKS_AT (536..833): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 91.7%; inactive: 87.5%; 2-Rhyd-Malonyl-CoA: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 160.7
inactive: 105.9
Methoxymalonyl-CoA: 68.4
Methylmalonyl-CoA: 51.3
Propionyl-CoA: 45.0
Ethylmalonyl-CoA: 31.2
Isobutyryl-CoA: 28.6
2-Methylbutyryl-CoA: 23.2
Benzoyl-CoA: 22.8
trans-1,2-CPDA: 20.8
CHC-CoA: 17.7
fatty_acid: 17.4
Acetyl-CoA: 15.8
3-Methylbutyryl-CoA: 0.0

TARA_SAMEA6034021_MAG_00000011-scaffold_59_7

Search NORINE for peptide: strict or relaxed

AMP-binding (520..941): X

NRPSPredictor2: asp, asn, glu, gln, aad

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DPRHfGlqaK
Nearest Stachelhaus code:: glu
Stachelhaus code match:: 60% (weak)

TARA_SAMEA6034021_MAG_00000011-scaffold_59_8

Search NORINE for peptide: strict or relaxed

AMP-binding (4..398): ala

NRPSPredictor2: ala

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: gly, ala
Single AA prediction:: ala

Stachelhaus prediction details:

Stachelhaus sequence:: DLFNNALTYK
Nearest Stachelhaus code:: ala
Stachelhaus code match:: 100% (strong)

TARA_SAMEA6034021_MAG_00000011-scaffold_59_9

Search NORINE for peptide: strict or relaxed

AMP-binding (504..899): gly

NRPSPredictor2: gly

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: gly, ala
Single AA prediction:: gly

Stachelhaus prediction details:

Stachelhaus sequence:: DILQLGmVWK
Nearest Stachelhaus code:: gly
Stachelhaus code match:: 90% (moderate)

TARA_SAMEA6034021_MAG_00000011-scaffold_59_10

Search NORINE for peptide: strict or relaxed

AMP-binding (23..419): leu

NRPSPredictor2: leu

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: leu

Stachelhaus prediction details:

Stachelhaus sequence:: DAWFLGhVVK
Nearest Stachelhaus code:: leu
Stachelhaus code match:: 90% (moderate)

TARA_SAMEA6034021_MAG_00000011-scaffold_59_11

Search NORINE for peptide: strict or relaxed

AMP-binding (508..918): X

NRPSPredictor2: asp, asn, glu, gln, aad

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DTEdVGTiaK
Nearest Stachelhaus code:: lys-b
Stachelhaus code match:: 70% (weak)

AMP-binding (1586..1979): ala

NRPSPredictor2: ala

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: gly, ala
Single AA prediction:: ala

Stachelhaus prediction details:

Stachelhaus sequence:: DLFNNALTYK
Nearest Stachelhaus code:: ala
Stachelhaus code match:: 100% (strong)

TARA_SAMEA6034021_MAG_00000011-scaffold_90 - Region 1 - terpene

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Location: 4,802 - 25,746 nt. (total: 20,945 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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TARA_SAMEA6034021_MAG_00000011-scaffold_92 - Region 1 - NRPS,T1PKS

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Location: 1 - 35,649 nt. (total: 35,649 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))
NRPS: cds(Condensation and (AMP-binding or A-OX))

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NRPS/PKS domains

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NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 35649:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (pk) + (cys) + (ohmal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6034021_MAG_00000011-scaffold_92_2

PKS_AT (660..977): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 79.2%; inactive: 75.0%; 2-Rhyd-Malonyl-CoA: 62.5%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 151.6
inactive: 104.0
Methoxymalonyl-CoA: 73.5
Methylmalonyl-CoA: 58.8
Propionyl-CoA: 41.2
Ethylmalonyl-CoA: 34.6
Isobutyryl-CoA: 26.2
2-Methylbutyryl-CoA: 22.9
trans-1,2-CPDA: 20.0
CHC-CoA: 18.5
fatty_acid: 17.8
Benzoyl-CoA: 15.2
Acetyl-CoA: 14.3
3-Methylbutyryl-CoA: 11.7

TARA_SAMEA6034021_MAG_00000011-scaffold_92_3

Search NORINE for peptide: strict or relaxed

AMP-binding (16..465): X

NRPSPredictor2: hydrophobic-aliphatic

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DmysaGAVFK
Nearest Stachelhaus code:: val
Stachelhaus code match:: 60% (weak)

TARA_SAMEA6034021_MAG_00000011-scaffold_92_11

Search NORINE for peptide: strict or relaxed

AMP-binding (1151..1552): cys

NRPSPredictor2: cys

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: cys
Small clusters prediction:: cys
Single AA prediction:: cys

Stachelhaus prediction details:

Stachelhaus sequence:: DLYNMSMIWK
Nearest Stachelhaus code:: cys
Stachelhaus code match:: 100% (strong)

TARA_SAMEA6034021_MAG_00000011-scaffold_92_16

PKS_AT (544..747): pk

ATSignature: (unknown)

No matches above 50%

minowa: inactive

Prediction, score:

inactive: 13.9
trans-1,2-CPDA: 0.0
fatty_acid: 0.0
Propionyl-CoA: 0.0
Methylmalonyl-CoA: 0.0
Methoxymalonyl-CoA: 0.0
Malonyl-CoA: 0.0
Isobutyryl-CoA: 0.0
Ethylmalonyl-CoA: 0.0
CHC-CoA: 0.0
Benzoyl-CoA: 0.0
Acetyl-CoA: 0.0
3-Methylbutyryl-CoA: 0.0
2-Methylbutyryl-CoA: 0.0

TARA_SAMEA6034021_MAG_00000011-scaffold_93 - Region 1 - RiPP-like

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Location: 25,840 - 35,495 nt. (total: 9,656 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

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TARA_SAMEA6034021_MAG_00000011-scaffold_94 - Region 1 - terpene

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Location: 1 - 17,721 nt. (total: 17,721 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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TARA_SAMEA6034021_MAG_00000011-scaffold_95 - Region 1 - NRPS,T1PKS

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Location: 1 - 34,782 nt. (total: 34,782 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))
T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

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NRPS/PKS domains

NRPS/PKS modules

Detailed domain annotation

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NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 34782:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (Me-ohmal) + (ser - X) + (leu - ala)

Direct lookup in NORINE database: strict or relaxed

For candidate cluster 2, location 0 - 28311:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (Me-ohmal) + (ser - X) + (leu - ala)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6034021_MAG_00000011-scaffold_95_1

PKS_AT (1353..1649): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 91.7%; inactive: 87.5%; 2-Rhyd-Malonyl-CoA: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 169.2
inactive: 107.0
Methoxymalonyl-CoA: 57.6
Methylmalonyl-CoA: 41.3
Propionyl-CoA: 33.8
CHC-CoA: 19.2
2-Methylbutyryl-CoA: 18.6
Ethylmalonyl-CoA: 16.8
Isobutyryl-CoA: 15.7
Benzoyl-CoA: 14.3
trans-1,2-CPDA: 11.3
Acetyl-CoA: 10.0
fatty_acid: 0.0
3-Methylbutyryl-CoA: 0.0

TARA_SAMEA6034021_MAG_00000011-scaffold_95_2

Search NORINE for peptide: strict or relaxed

AMP-binding (510..907): ser

NRPSPredictor2: ser

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: ser, thr, dhpg, hpg
Small clusters prediction:: ser
Single AA prediction:: ser

Stachelhaus prediction details:

Stachelhaus sequence:: DVWHFSLVDK
Nearest Stachelhaus code:: ser
Stachelhaus code match:: 100% (strong)

AMP-binding (1570..1979): X

NRPSPredictor2: asp, asn, glu, gln, aad

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAeDIGtVvK
Nearest Stachelhaus code:: glu
Stachelhaus code match:: 70% (weak)

TARA_SAMEA6034021_MAG_00000011-scaffold_95_3

Search NORINE for peptide: strict or relaxed

AMP-binding (509..902): leu

NRPSPredictor2: leu

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: leu

Stachelhaus prediction details:

Stachelhaus sequence:: DAWFLGNVVK
Nearest Stachelhaus code:: leu
Stachelhaus code match:: 100% (strong)

AMP-binding (1569..1959): ala

NRPSPredictor2: ala

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: gly, ala
Single AA prediction:: ala

Stachelhaus prediction details:

Stachelhaus sequence:: DLFNNALTYK
Nearest Stachelhaus code:: ala
Stachelhaus code match:: 100% (strong)

TARA_SAMEA6034021_MAG_00000011-scaffold_116 - Region 1 - NRPS,T1PKS

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Location: 1 - 29,298 nt. (total: 29,298 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))
T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

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NRPS/PKS domains

NRPS/PKS modules

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NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 29298:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (mal - X) + (D-asn - X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6034021_MAG_00000011-scaffold_116_6

Search NORINE for peptide: strict or relaxed

AMP-binding (501..901): asn

NRPSPredictor2: asn

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: asp, asn
Single AA prediction:: asn

Stachelhaus prediction details:

Stachelhaus sequence:: DLTKIGEVGK
Nearest Stachelhaus code:: asn
Stachelhaus code match:: 100% (strong)

AMP-binding (2478..2891): X

NRPSPredictor2: asp, asn, glu, gln, aad

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aromatic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DiWeItAdDK
Nearest Stachelhaus code:: arg
Stachelhaus code match:: 60% (weak)

TARA_SAMEA6034021_MAG_00000011-scaffold_116_7

Search NORINE for peptide: strict or relaxed

CAL_domain (45..487): pk

minowa: NH2

Prediction, score:

NH2: 179.5
AHBA: 17.5
shikimic_acid: 9.8
fatty_acid: 5.8
Acetyl-CoA: -0.7

PKS_AT (1225..1520): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 100.0%; inactive: 95.8%; 2-Rhyd-Malonyl-CoA: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 187.0
inactive: 150.9
Methoxymalonyl-CoA: 71.0
Methylmalonyl-CoA: 62.0
Propionyl-CoA: 45.1
Isobutyryl-CoA: 41.3
2-Methylbutyryl-CoA: 38.1
Ethylmalonyl-CoA: 33.6
Benzoyl-CoA: 27.9
trans-1,2-CPDA: 22.0
CHC-CoA: 21.7
Acetyl-CoA: 20.4
fatty_acid: 19.7
3-Methylbutyryl-CoA: 15.2

AMP-binding (3242..3652): X

NRPSPredictor2: (unknown)

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DiWeItAdDK
Nearest Stachelhaus code:: arg
Stachelhaus code match:: 60% (weak)

TARA_SAMEA6034021_MAG_00000011-scaffold_120 - Region 1 - NRPS

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Location: 1 - 27,843 nt. (total: 27,843 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

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NRPS/PKS domains

Detailed domain annotation

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TARA_SAMEA6034021_MAG_00000011-scaffold_133 - Region 1 - lanthipeptide-class-ii

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Location: 1 - 15,596 nt. (total: 15,596 nt) Show pHMM detection rules used

Region on contig edge.

lanthipeptide-class-ii: cds(LANC_like and DUF4135)

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Lanthipeptides

Lanthipeptide predictions

Lanthipeptide(s) for TARA_SAMEA6034021_MAG_00000011-scaffold_133_5 - Putative Class II

allorf_00048_00158 leader / core peptide: MYASMYGS - HCIGLYDhbWPCDMGIDhaVLDKIPVLMLNGC
allorf_05632_05727 leader / core peptide: MELQHLESS - DhaIFLWCGIIVCRFVLRCVLDhaDhbL
allorf_08281_08415 leader / core peptide: LSGLEVKTSPNG - AFDKLRHCVPPLRRDhaNAPVADhaDhbFPCHDhaVADhaPI

Legend:

Dha: Didehydroalanine
Dhb: Didehydrobutyrine

Lanthipeptides

Core peptide predictions

allorf_00048_00158 - Class II

Cleavage pHMM score: -6.20

RODEO score: 0

Monoisotopic mass: 3054.5 Da

Molecular weight: 3056.7 Da

Number of bridges: 2

allorf_05632_05727 - Class II

Cleavage pHMM score: -7.20

RODEO score: 0

Monoisotopic mass: 2486.4 Da

Molecular weight: 2488.1 Da

Number of bridges: 3

allorf_08281_08415 - Class II

Cleavage pHMM score: -7.20

RODEO score: 0

Monoisotopic mass: 3382.8 Da

Molecular weight: 3384.9 Da

Number of bridges: 2

Alternative weights: (assuming N unmodified Ser/Thr residues); 3402.9 Da N = 1; 3421.0 Da N = 2; 3439.0 Da N = 3

TARA_SAMEA6034021_MAG_00000011-scaffold_146 - Region 1 - NRPS-like

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Location: 1 - 22,847 nt. (total: 22,847 nt) Show pHMM detection rules used

Region on contig edge.

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

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NRPS/PKS domains

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NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 22847:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (tyr)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6034021_MAG_00000011-scaffold_146_1

Search NORINE for peptide: strict or relaxed

AMP-binding (576..968): tyr

NRPSPredictor2: tyr

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aromatic
Large clusters prediction:: phe, trp, phg, tyr, bht
Small clusters prediction:: tyr, bht
Single AA prediction:: tyr

Stachelhaus prediction details:

Stachelhaus sequence:: DASTVAAVCK
Nearest Stachelhaus code:: tyr
Stachelhaus code match:: 100% (strong)

TARA_SAMEA6034021_MAG_00000011-scaffold_148 - Region 1 - T3PKS

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Location: 1 - 22,663 nt. (total: 22,663 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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TARA_SAMEA6034021_MAG_00000011-scaffold_164 - Region 1 - NRPS

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Location: 1 - 19,056 nt. (total: 19,056 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

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NRPS/PKS domains

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NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 19056:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (leu - NMe-X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6034021_MAG_00000011-scaffold_164_1

Search NORINE for peptide: strict or relaxed

AMP-binding (510..906): leu

NRPSPredictor2: leu

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: leu

Stachelhaus prediction details:

Stachelhaus sequence:: DAWFLGNVVK
Nearest Stachelhaus code:: leu
Stachelhaus code match:: 100% (strong)

AMP-binding (1567..1958): X

NRPSPredictor2: gly, ala, val, leu, ile, abu, iva

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DaFtLaLIWK
Nearest Stachelhaus code:: cys
Stachelhaus code match:: 70% (weak)

TARA_SAMEA6034021_MAG_00000011-scaffold_176 - Region 1 - T1PKS

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Location: 1 - 16,927 nt. (total: 16,927 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

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NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 16927:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (Me-ccmal) + (Me-ccmal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6034021_MAG_00000011-scaffold_176_1

PKS_AT (562..859): mmal

ATSignature: Methylmalonyl-CoA

Top 3 matches:: Methylmalonyl-CoA: 79.2%; Malonyl-CoA: 75.0%; Propionyl-CoA: 62.5%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 139.4
Ethylmalonyl-CoA: 121.1
Methoxymalonyl-CoA: 115.3
Malonyl-CoA: 84.7
trans-1,2-CPDA: 81.3
2-Methylbutyryl-CoA: 80.6
Propionyl-CoA: 77.4
Isobutyryl-CoA: 72.4
Acetyl-CoA: 56.2
CHC-CoA: 54.8
Benzoyl-CoA: 46.7
3-Methylbutyryl-CoA: 41.7
fatty_acid: 32.5
inactive: 29.0

TARA_SAMEA6034021_MAG_00000011-scaffold_176_2

PKS_AT (431..728): mmal

ATSignature: Methylmalonyl-CoA

Top 3 matches:: Methylmalonyl-CoA: 79.2%; Malonyl-CoA: 75.0%; Propionyl-CoA: 62.5%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 139.7
Ethylmalonyl-CoA: 122.8
Methoxymalonyl-CoA: 110.3
Malonyl-CoA: 100.2
2-Methylbutyryl-CoA: 80.1
Propionyl-CoA: 80.0
Isobutyryl-CoA: 71.3
trans-1,2-CPDA: 66.8
CHC-CoA: 60.0
3-Methylbutyryl-CoA: 56.6
Acetyl-CoA: 54.3
Benzoyl-CoA: 46.2
inactive: 36.3
fatty_acid: 33.0

TARA_SAMEA6034021_MAG_00000011-scaffold_183 - Region 1 - NRPS

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Location: 1 - 15,600 nt. (total: 15,600 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

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NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 15600:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (cys)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6034021_MAG_00000011-scaffold_183_2

Search NORINE for peptide: strict or relaxed

AMP-binding (569..971): cys

NRPSPredictor2: cys

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: cys
Small clusters prediction:: cys
Single AA prediction:: cys

Stachelhaus prediction details:

Stachelhaus sequence:: DLYNLSLIWK
Nearest Stachelhaus code:: cys
Stachelhaus code match:: 100% (strong)

TARA_SAMEA6034021_MAG_00000011-scaffold_186 - Region 1 - RiPP-like

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Location: 2,143 - 14,188 nt. (total: 12,046 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

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TARA_SAMEA6034021_MAG_00000011-scaffold_189 - Region 1 - NRPS,T1PKS

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Location: 1 - 14,862 nt. (total: 14,862 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))
T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

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NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 14862:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (Me-ohmal - ser)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6034021_MAG_00000011-scaffold_189_1

Search NORINE for peptide: strict or relaxed

PKS_AT (656..955): mmal

ATSignature: Methylmalonyl-CoA

Top 3 matches:: Methylmalonyl-CoA: 91.7%; Ethylmalonyl-CoA: 83.3%; Methoxymalonyl-CoA: 83.3%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 164.0
Methoxymalonyl-CoA: 135.9
Ethylmalonyl-CoA: 131.5
Isobutyryl-CoA: 108.1
trans-1,2-CPDA: 97.9
2-Methylbutyryl-CoA: 95.0
Benzoyl-CoA: 92.7
Propionyl-CoA: 85.3
Malonyl-CoA: 82.7
Acetyl-CoA: 56.2
CHC-CoA: 47.1
3-Methylbutyryl-CoA: 46.4
fatty_acid: 40.4
inactive: 27.1

AMP-binding (2117..2520): ser

NRPSPredictor2: ser

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: ser, thr, dhpg, hpg
Small clusters prediction:: ser
Single AA prediction:: ser

Stachelhaus prediction details:

Stachelhaus sequence:: DVWHISLVDK
Nearest Stachelhaus code:: ser
Stachelhaus code match:: 100% (strong)

TARA_SAMEA6034021_MAG_00000011-scaffold_189_2

CAL_domain (171..492): pk

minowa: NH2

Prediction, score:

NH2: 159.6
Acetyl-CoA: 43.8
fatty_acid: 18.8
AHBA: 14.1
shikimic_acid: 0.0

TARA_SAMEA6034021_MAG_00000011-scaffold_227 - Region 1 - T1PKS

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Location: 1 - 10,414 nt. (total: 10,414 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

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NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 10414:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (ohmal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6034021_MAG_00000011-scaffold_227_1

PKS_AT (335..630): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 95.8%; inactive: 87.5%; Methylmalonyl-CoA: 58.3%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 182.7
inactive: 128.7
Methoxymalonyl-CoA: 64.2
Methylmalonyl-CoA: 53.7
Propionyl-CoA: 38.0
Isobutyryl-CoA: 22.9
Ethylmalonyl-CoA: 22.5
2-Methylbutyryl-CoA: 18.3
Benzoyl-CoA: 15.4
CHC-CoA: 14.5
trans-1,2-CPDA: 10.9
fatty_acid: 8.7
Acetyl-CoA: 8.5
3-Methylbutyryl-CoA: 0.0

TARA_SAMEA6034021_MAG_00000011-scaffold_231 - Region 1 - NRPS

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Location: 1 - 10,055 nt. (total: 10,055 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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NRPS/PKS domains

NRPS/PKS modules

Detailed domain annotation

Selected features only

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NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 10055:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6034021_MAG_00000011-scaffold_231_2

Search NORINE for peptide: strict or relaxed

AMP-binding (457..848): X

NRPSPredictor2: (unknown)

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAFTtAAVwK
Nearest Stachelhaus code:: phe
Stachelhaus code match:: 80% (moderate)

TARA_SAMEA6034021_MAG_00000011-scaffold_248 - Region 1 - NRPS-like

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Location: 1 - 7,813 nt. (total: 7,813 nt) Show pHMM detection rules used

Region on contig edge.

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains