TARA_SAMEA6023884_MAG_00000019 - 29 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

TARA_SAMEA6023884_MAG_00000019-scaffold_1

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	terpene	109,148	130,080

TARA_SAMEA6023884_MAG_00000019-scaffold_7

Region	Type	From	To	Most similar known cluster		Similarity
Region 7.1	NRPS	50,029	102,182

TARA_SAMEA6023884_MAG_00000019-scaffold_13

Region	Type	From	To	Most similar known cluster		Similarity
Region 13.1	indole	1	13,405

TARA_SAMEA6023884_MAG_00000019-scaffold_14

Region	Type	From	To	Most similar known cluster		Similarity
Region 14.1	lanthipeptide-class-v	10,815	72,284

TARA_SAMEA6023884_MAG_00000019-scaffold_17

Region	Type	From	To	Most similar known cluster		Similarity
Region 17.1	NRPS	27,595	71,677

TARA_SAMEA6023884_MAG_00000019-scaffold_18

Region	Type	From	To	Most similar known cluster		Similarity
Region 18.1	NRPS,T1PKS	1	83,629

TARA_SAMEA6023884_MAG_00000019-scaffold_22

Region	Type	From	To	Most similar known cluster		Similarity
Region 22.1	NRPS,T1PKS,NRPS-like	227	79,177

TARA_SAMEA6023884_MAG_00000019-scaffold_36

Region	Type	From	To	Most similar known cluster		Similarity
Region 36.1	ladderane	38,691	62,061

TARA_SAMEA6023884_MAG_00000019-scaffold_45

Region	Type	From	To	Most similar known cluster		Similarity
Region 45.1	redox-cofactor	1	21,845

TARA_SAMEA6023884_MAG_00000019-scaffold_51

Region	Type	From	To	Most similar known cluster		Similarity
Region 51.1	T1PKS,NRPS,PKS-like	1	53,364

TARA_SAMEA6023884_MAG_00000019-scaffold_63

Region	Type	From	To	Most similar known cluster		Similarity
Region 63.1	NRPS,NRPS-like,T1PKS	1	45,954

TARA_SAMEA6023884_MAG_00000019-scaffold_68

Region	Type	From	To	Most similar known cluster		Similarity
Region 68.1	cyanobactin	12,261	34,516

TARA_SAMEA6023884_MAG_00000019-scaffold_88

Region	Type	From	To	Most similar known cluster		Similarity
Region 88.1	T1PKS,hglE-KS	1	35,988

TARA_SAMEA6023884_MAG_00000019-scaffold_98

Region	Type	From	To	Most similar known cluster		Similarity
Region 98.1	NRPS,T1PKS	1	31,939

TARA_SAMEA6023884_MAG_00000019-scaffold_99

Region	Type	From	To	Most similar known cluster		Similarity
Region 99.1	NRPS	1	31,911

TARA_SAMEA6023884_MAG_00000019-scaffold_104

Region	Type	From	To	Most similar known cluster		Similarity
Region 104.1	T1PKS,PKS-like,T3PKS	1	31,114

TARA_SAMEA6023884_MAG_00000019-scaffold_128

Region	Type	From	To	Most similar known cluster		Similarity
Region 128.1	T1PKS	1	25,998

TARA_SAMEA6023884_MAG_00000019-scaffold_133

Region	Type	From	To	Most similar known cluster		Similarity
Region 133.1	NRPS	1	25,580

TARA_SAMEA6023884_MAG_00000019-scaffold_138

Region	Type	From	To	Most similar known cluster		Similarity
Region 138.1	T1PKS,NRPS	1	25,131

TARA_SAMEA6023884_MAG_00000019-scaffold_141

Region	Type	From	To	Most similar known cluster		Similarity
Region 141.1	NRPS	1	24,810

TARA_SAMEA6023884_MAG_00000019-scaffold_184

Region	Type	From	To	Most similar known cluster		Similarity
Region 184.1	NRPS	1	17,160

TARA_SAMEA6023884_MAG_00000019-scaffold_196

Region	Type	From	To	Most similar known cluster		Similarity
Region 196.1	NRPS	1	15,859

TARA_SAMEA6023884_MAG_00000019-scaffold_203

Region	Type	From	To	Most similar known cluster		Similarity
Region 203.1	T1PKS,NRPS	1	15,100

TARA_SAMEA6023884_MAG_00000019-scaffold_219

Region	Type	From	To	Most similar known cluster		Similarity
Region 219.1	NRPS-like	1	13,450

TARA_SAMEA6023884_MAG_00000019-scaffold_221

Region	Type	From	To	Most similar known cluster		Similarity
Region 221.1	NRPS	1	13,317

TARA_SAMEA6023884_MAG_00000019-scaffold_229

Region	Type	From	To	Most similar known cluster		Similarity
Region 229.1	NRPS	1	12,451

TARA_SAMEA6023884_MAG_00000019-scaffold_251

Region	Type	From	To	Most similar known cluster		Similarity
Region 251.1	PKS-like,T3PKS	1	10,196

TARA_SAMEA6023884_MAG_00000019-scaffold_266

Region	Type	From	To	Most similar known cluster		Similarity
Region 266.1	NRPS	1	9,357

TARA_SAMEA6023884_MAG_00000019-scaffold_274

Region	Type	From	To	Most similar known cluster		Similarity
Region 274.1	T1PKS	1	8,600

Region	Type	From	To	Similarity
Region 1.1	terpene	109,148	130,080
Region 7.1	NRPS	50,029	102,182
Region 13.1	indole	1	13,405
Region 14.1	lanthipeptide-class-v	10,815	72,284
Region 17.1	NRPS	27,595	71,677
Region 18.1	NRPS,T1PKS	1	83,629
Region 22.1	NRPS,T1PKS,NRPS-like	227	79,177
Region 36.1	ladderane	38,691	62,061
Region 45.1	redox-cofactor	1	21,845
Region 51.1	T1PKS,NRPS,PKS-like	1	53,364
Region 63.1	NRPS,NRPS-like,T1PKS	1	45,954
Region 68.1	cyanobactin	12,261	34,516
Region 88.1	T1PKS,hglE-KS	1	35,988
Region 98.1	NRPS,T1PKS	1	31,939
Region 99.1	NRPS	1	31,911
Region 104.1	T1PKS,PKS-like,T3PKS	1	31,114
Region 128.1	T1PKS	1	25,998
Region 133.1	NRPS	1	25,580
Region 138.1	T1PKS,NRPS	1	25,131
Region 141.1	NRPS	1	24,810
Region 184.1	NRPS	1	17,160
Region 196.1	NRPS	1	15,859
Region 203.1	T1PKS,NRPS	1	15,100
Region 219.1	NRPS-like	1	13,450
Region 221.1	NRPS	1	13,317
Region 229.1	NRPS	1	12,451
Region 251.1	PKS-like,T3PKS	1	10,196
Region 266.1	NRPS	1	9,357
Region 274.1	T1PKS	1	8,600

No secondary metabolite regions were found in these records:: TARA_SAMEA6023884_MAG_00000019-scaffold_2; TARA_SAMEA6023884_MAG_00000019-scaffold_3; TARA_SAMEA6023884_MAG_00000019-scaffold_4; TARA_SAMEA6023884_MAG_00000019-scaffold_5; TARA_SAMEA6023884_MAG_00000019-scaffold_6; TARA_SAMEA6023884_MAG_00000019-scaffold_8; TARA_SAMEA6023884_MAG_00000019-scaffold_9; TARA_SAMEA6023884_MAG_00000019-scaffold_10; TARA_SAMEA6023884_MAG_00000019-scaffold_11; TARA_SAMEA6023884_MAG_00000019-scaffold_12; TARA_SAMEA6023884_MAG_00000019-scaffold_15; TARA_SAMEA6023884_MAG_00000019-scaffold_16; TARA_SAMEA6023884_MAG_00000019-scaffold_19; TARA_SAMEA6023884_MAG_00000019-scaffold_20; TARA_SAMEA6023884_MAG_00000019-scaffold_21; TARA_SAMEA6023884_MAG_00000019-scaffold_23; TARA_SAMEA6023884_MAG_00000019-scaffold_24; TARA_SAMEA6023884_MAG_00000019-scaffold_25; TARA_SAMEA6023884_MAG_00000019-scaffold_26; TARA_SAMEA6023884_MAG_00000019-scaffold_27; TARA_SAMEA6023884_MAG_00000019-scaffold_28; TARA_SAMEA6023884_MAG_00000019-scaffold_29; TARA_SAMEA6023884_MAG_00000019-scaffold_30; TARA_SAMEA6023884_MAG_00000019-scaffold_31; TARA_SAMEA6023884_MAG_00000019-scaffold_32; TARA_SAMEA6023884_MAG_00000019-scaffold_33; TARA_SAMEA6023884_MAG_00000019-scaffold_34; TARA_SAMEA6023884_MAG_00000019-scaffold_35; TARA_SAMEA6023884_MAG_00000019-scaffold_37; TARA_SAMEA6023884_MAG_00000019-scaffold_38; TARA_SAMEA6023884_MAG_00000019-scaffold_39; TARA_SAMEA6023884_MAG_00000019-scaffold_40; TARA_SAMEA6023884_MAG_00000019-scaffold_41; TARA_SAMEA6023884_MAG_00000019-scaffold_42; TARA_SAMEA6023884_MAG_00000019-scaffold_43; TARA_SAMEA6023884_MAG_00000019-scaffold_44; TARA_SAMEA6023884_MAG_00000019-scaffold_46; TARA_SAMEA6023884_MAG_00000019-scaffold_47; TARA_SAMEA6023884_MAG_00000019-scaffold_48; TARA_SAMEA6023884_MAG_00000019-scaffold_49; TARA_SAMEA6023884_MAG_00000019-scaffold_50; TARA_SAMEA6023884_MAG_00000019-scaffold_52; TARA_SAMEA6023884_MAG_00000019-scaffold_53; TARA_SAMEA6023884_MAG_00000019-scaffold_54; TARA_SAMEA6023884_MAG_00000019-scaffold_55; TARA_SAMEA6023884_MAG_00000019-scaffold_56; TARA_SAMEA6023884_MAG_00000019-scaffold_57; TARA_SAMEA6023884_MAG_00000019-scaffold_58; TARA_SAMEA6023884_MAG_00000019-scaffold_59; TARA_SAMEA6023884_MAG_00000019-scaffold_60; TARA_SAMEA6023884_MAG_00000019-scaffold_61; TARA_SAMEA6023884_MAG_00000019-scaffold_62; TARA_SAMEA6023884_MAG_00000019-scaffold_64; TARA_SAMEA6023884_MAG_00000019-scaffold_65; TARA_SAMEA6023884_MAG_00000019-scaffold_66; TARA_SAMEA6023884_MAG_00000019-scaffold_67; TARA_SAMEA6023884_MAG_00000019-scaffold_69; TARA_SAMEA6023884_MAG_00000019-scaffold_70; TARA_SAMEA6023884_MAG_00000019-scaffold_71; TARA_SAMEA6023884_MAG_00000019-scaffold_72; TARA_SAMEA6023884_MAG_00000019-scaffold_73; TARA_SAMEA6023884_MAG_00000019-scaffold_74; TARA_SAMEA6023884_MAG_00000019-scaffold_75; TARA_SAMEA6023884_MAG_00000019-scaffold_76; TARA_SAMEA6023884_MAG_00000019-scaffold_77; TARA_SAMEA6023884_MAG_00000019-scaffold_78; TARA_SAMEA6023884_MAG_00000019-scaffold_79; TARA_SAMEA6023884_MAG_00000019-scaffold_80; TARA_SAMEA6023884_MAG_00000019-scaffold_81; TARA_SAMEA6023884_MAG_00000019-scaffold_82; TARA_SAMEA6023884_MAG_00000019-scaffold_83; TARA_SAMEA6023884_MAG_00000019-scaffold_84; TARA_SAMEA6023884_MAG_00000019-scaffold_85; TARA_SAMEA6023884_MAG_00000019-scaffold_86; TARA_SAMEA6023884_MAG_00000019-scaffold_87; TARA_SAMEA6023884_MAG_00000019-scaffold_89; TARA_SAMEA6023884_MAG_00000019-scaffold_90; TARA_SAMEA6023884_MAG_00000019-scaffold_91; TARA_SAMEA6023884_MAG_00000019-scaffold_92; TARA_SAMEA6023884_MAG_00000019-scaffold_93; TARA_SAMEA6023884_MAG_00000019-scaffold_94; TARA_SAMEA6023884_MAG_00000019-scaffold_95; TARA_SAMEA6023884_MAG_00000019-scaffold_96; TARA_SAMEA6023884_MAG_00000019-scaffold_97; TARA_SAMEA6023884_MAG_00000019-scaffold_100; TARA_SAMEA6023884_MAG_00000019-scaffold_101; TARA_SAMEA6023884_MAG_00000019-scaffold_102; TARA_SAMEA6023884_MAG_00000019-scaffold_103; TARA_SAMEA6023884_MAG_00000019-scaffold_105; TARA_SAMEA6023884_MAG_00000019-scaffold_106; TARA_SAMEA6023884_MAG_00000019-scaffold_107; TARA_SAMEA6023884_MAG_00000019-scaffold_108; TARA_SAMEA6023884_MAG_00000019-scaffold_109; TARA_SAMEA6023884_MAG_00000019-scaffold_110; TARA_SAMEA6023884_MAG_00000019-scaffold_111; TARA_SAMEA6023884_MAG_00000019-scaffold_112; TARA_SAMEA6023884_MAG_00000019-scaffold_113; TARA_SAMEA6023884_MAG_00000019-scaffold_114; TARA_SAMEA6023884_MAG_00000019-scaffold_115; TARA_SAMEA6023884_MAG_00000019-scaffold_116; TARA_SAMEA6023884_MAG_00000019-scaffold_117; TARA_SAMEA6023884_MAG_00000019-scaffold_118; TARA_SAMEA6023884_MAG_00000019-scaffold_119; TARA_SAMEA6023884_MAG_00000019-scaffold_120; TARA_SAMEA6023884_MAG_00000019-scaffold_121; TARA_SAMEA6023884_MAG_00000019-scaffold_122; TARA_SAMEA6023884_MAG_00000019-scaffold_123; TARA_SAMEA6023884_MAG_00000019-scaffold_124; TARA_SAMEA6023884_MAG_00000019-scaffold_125; TARA_SAMEA6023884_MAG_00000019-scaffold_126; TARA_SAMEA6023884_MAG_00000019-scaffold_127; TARA_SAMEA6023884_MAG_00000019-scaffold_129; TARA_SAMEA6023884_MAG_00000019-scaffold_130; TARA_SAMEA6023884_MAG_00000019-scaffold_131; TARA_SAMEA6023884_MAG_00000019-scaffold_132; TARA_SAMEA6023884_MAG_00000019-scaffold_134; TARA_SAMEA6023884_MAG_00000019-scaffold_135; TARA_SAMEA6023884_MAG_00000019-scaffold_136; TARA_SAMEA6023884_MAG_00000019-scaffold_137; TARA_SAMEA6023884_MAG_00000019-scaffold_139; TARA_SAMEA6023884_MAG_00000019-scaffold_140; TARA_SAMEA6023884_MAG_00000019-scaffold_142; TARA_SAMEA6023884_MAG_00000019-scaffold_143; TARA_SAMEA6023884_MAG_00000019-scaffold_144; TARA_SAMEA6023884_MAG_00000019-scaffold_145; TARA_SAMEA6023884_MAG_00000019-scaffold_146; TARA_SAMEA6023884_MAG_00000019-scaffold_147; TARA_SAMEA6023884_MAG_00000019-scaffold_148; TARA_SAMEA6023884_MAG_00000019-scaffold_149; TARA_SAMEA6023884_MAG_00000019-scaffold_150; TARA_SAMEA6023884_MAG_00000019-scaffold_151; TARA_SAMEA6023884_MAG_00000019-scaffold_152; TARA_SAMEA6023884_MAG_00000019-scaffold_153; TARA_SAMEA6023884_MAG_00000019-scaffold_154; TARA_SAMEA6023884_MAG_00000019-scaffold_155; TARA_SAMEA6023884_MAG_00000019-scaffold_156; TARA_SAMEA6023884_MAG_00000019-scaffold_157; TARA_SAMEA6023884_MAG_00000019-scaffold_158; TARA_SAMEA6023884_MAG_00000019-scaffold_159; TARA_SAMEA6023884_MAG_00000019-scaffold_160; TARA_SAMEA6023884_MAG_00000019-scaffold_161; TARA_SAMEA6023884_MAG_00000019-scaffold_162; TARA_SAMEA6023884_MAG_00000019-scaffold_163; TARA_SAMEA6023884_MAG_00000019-scaffold_164; TARA_SAMEA6023884_MAG_00000019-scaffold_165; TARA_SAMEA6023884_MAG_00000019-scaffold_166; TARA_SAMEA6023884_MAG_00000019-scaffold_167; TARA_SAMEA6023884_MAG_00000019-scaffold_168; TARA_SAMEA6023884_MAG_00000019-scaffold_169; TARA_SAMEA6023884_MAG_00000019-scaffold_170; TARA_SAMEA6023884_MAG_00000019-scaffold_171; TARA_SAMEA6023884_MAG_00000019-scaffold_172; TARA_SAMEA6023884_MAG_00000019-scaffold_173; TARA_SAMEA6023884_MAG_00000019-scaffold_174; TARA_SAMEA6023884_MAG_00000019-scaffold_175; TARA_SAMEA6023884_MAG_00000019-scaffold_176; TARA_SAMEA6023884_MAG_00000019-scaffold_177; TARA_SAMEA6023884_MAG_00000019-scaffold_178; TARA_SAMEA6023884_MAG_00000019-scaffold_179; TARA_SAMEA6023884_MAG_00000019-scaffold_180; TARA_SAMEA6023884_MAG_00000019-scaffold_181; TARA_SAMEA6023884_MAG_00000019-scaffold_182; TARA_SAMEA6023884_MAG_00000019-scaffold_183; TARA_SAMEA6023884_MAG_00000019-scaffold_185; TARA_SAMEA6023884_MAG_00000019-scaffold_186; TARA_SAMEA6023884_MAG_00000019-scaffold_187; TARA_SAMEA6023884_MAG_00000019-scaffold_188; TARA_SAMEA6023884_MAG_00000019-scaffold_189; TARA_SAMEA6023884_MAG_00000019-scaffold_190; TARA_SAMEA6023884_MAG_00000019-scaffold_191; TARA_SAMEA6023884_MAG_00000019-scaffold_192; TARA_SAMEA6023884_MAG_00000019-scaffold_193; TARA_SAMEA6023884_MAG_00000019-scaffold_194; TARA_SAMEA6023884_MAG_00000019-scaffold_195; TARA_SAMEA6023884_MAG_00000019-scaffold_197; TARA_SAMEA6023884_MAG_00000019-scaffold_198; TARA_SAMEA6023884_MAG_00000019-scaffold_199; TARA_SAMEA6023884_MAG_00000019-scaffold_200; TARA_SAMEA6023884_MAG_00000019-scaffold_201; TARA_SAMEA6023884_MAG_00000019-scaffold_202; TARA_SAMEA6023884_MAG_00000019-scaffold_204; TARA_SAMEA6023884_MAG_00000019-scaffold_205; TARA_SAMEA6023884_MAG_00000019-scaffold_206; TARA_SAMEA6023884_MAG_00000019-scaffold_207; TARA_SAMEA6023884_MAG_00000019-scaffold_208; TARA_SAMEA6023884_MAG_00000019-scaffold_209; TARA_SAMEA6023884_MAG_00000019-scaffold_210; TARA_SAMEA6023884_MAG_00000019-scaffold_211; TARA_SAMEA6023884_MAG_00000019-scaffold_212; TARA_SAMEA6023884_MAG_00000019-scaffold_213; TARA_SAMEA6023884_MAG_00000019-scaffold_214; TARA_SAMEA6023884_MAG_00000019-scaffold_215; TARA_SAMEA6023884_MAG_00000019-scaffold_216; TARA_SAMEA6023884_MAG_00000019-scaffold_217; TARA_SAMEA6023884_MAG_00000019-scaffold_218; TARA_SAMEA6023884_MAG_00000019-scaffold_220; TARA_SAMEA6023884_MAG_00000019-scaffold_222; TARA_SAMEA6023884_MAG_00000019-scaffold_223; TARA_SAMEA6023884_MAG_00000019-scaffold_224; TARA_SAMEA6023884_MAG_00000019-scaffold_225; TARA_SAMEA6023884_MAG_00000019-scaffold_226; TARA_SAMEA6023884_MAG_00000019-scaffold_227; TARA_SAMEA6023884_MAG_00000019-scaffold_228; TARA_SAMEA6023884_MAG_00000019-scaffold_230; TARA_SAMEA6023884_MAG_00000019-scaffold_231; TARA_SAMEA6023884_MAG_00000019-scaffold_232; TARA_SAMEA6023884_MAG_00000019-scaffold_233; TARA_SAMEA6023884_MAG_00000019-scaffold_234; TARA_SAMEA6023884_MAG_00000019-scaffold_235; TARA_SAMEA6023884_MAG_00000019-scaffold_236; TARA_SAMEA6023884_MAG_00000019-scaffold_237; TARA_SAMEA6023884_MAG_00000019-scaffold_238; TARA_SAMEA6023884_MAG_00000019-scaffold_239; TARA_SAMEA6023884_MAG_00000019-scaffold_240; TARA_SAMEA6023884_MAG_00000019-scaffold_241; TARA_SAMEA6023884_MAG_00000019-scaffold_242; TARA_SAMEA6023884_MAG_00000019-scaffold_243; TARA_SAMEA6023884_MAG_00000019-scaffold_244; TARA_SAMEA6023884_MAG_00000019-scaffold_245; TARA_SAMEA6023884_MAG_00000019-scaffold_246; TARA_SAMEA6023884_MAG_00000019-scaffold_247; TARA_SAMEA6023884_MAG_00000019-scaffold_248; TARA_SAMEA6023884_MAG_00000019-scaffold_249; TARA_SAMEA6023884_MAG_00000019-scaffold_250; TARA_SAMEA6023884_MAG_00000019-scaffold_252; TARA_SAMEA6023884_MAG_00000019-scaffold_253; TARA_SAMEA6023884_MAG_00000019-scaffold_254; TARA_SAMEA6023884_MAG_00000019-scaffold_255; TARA_SAMEA6023884_MAG_00000019-scaffold_256; TARA_SAMEA6023884_MAG_00000019-scaffold_257; TARA_SAMEA6023884_MAG_00000019-scaffold_258; TARA_SAMEA6023884_MAG_00000019-scaffold_259; TARA_SAMEA6023884_MAG_00000019-scaffold_260; TARA_SAMEA6023884_MAG_00000019-scaffold_261; TARA_SAMEA6023884_MAG_00000019-scaffold_262; TARA_SAMEA6023884_MAG_00000019-scaffold_263; TARA_SAMEA6023884_MAG_00000019-scaffold_264; TARA_SAMEA6023884_MAG_00000019-scaffold_265; TARA_SAMEA6023884_MAG_00000019-scaffold_267; TARA_SAMEA6023884_MAG_00000019-scaffold_268; TARA_SAMEA6023884_MAG_00000019-scaffold_269; TARA_SAMEA6023884_MAG_00000019-scaffold_270; TARA_SAMEA6023884_MAG_00000019-scaffold_271; TARA_SAMEA6023884_MAG_00000019-scaffold_272; TARA_SAMEA6023884_MAG_00000019-scaffold_273; TARA_SAMEA6023884_MAG_00000019-scaffold_275; TARA_SAMEA6023884_MAG_00000019-scaffold_276; TARA_SAMEA6023884_MAG_00000019-scaffold_277; TARA_SAMEA6023884_MAG_00000019-scaffold_278; TARA_SAMEA6023884_MAG_00000019-scaffold_279; TARA_SAMEA6023884_MAG_00000019-scaffold_280; TARA_SAMEA6023884_MAG_00000019-scaffold_281; TARA_SAMEA6023884_MAG_00000019-scaffold_282; TARA_SAMEA6023884_MAG_00000019-scaffold_283; TARA_SAMEA6023884_MAG_00000019-scaffold_284; TARA_SAMEA6023884_MAG_00000019-scaffold_285; TARA_SAMEA6023884_MAG_00000019-scaffold_286; TARA_SAMEA6023884_MAG_00000019-scaffold_287; TARA_SAMEA6023884_MAG_00000019-scaffold_288; TARA_SAMEA6023884_MAG_00000019-scaffold_289; TARA_SAMEA6023884_MAG_00000019-scaffold_290; TARA_SAMEA6023884_MAG_00000019-scaffold_291; TARA_SAMEA6023884_MAG_00000019-scaffold_292; TARA_SAMEA6023884_MAG_00000019-scaffold_293; TARA_SAMEA6023884_MAG_00000019-scaffold_294; TARA_SAMEA6023884_MAG_00000019-scaffold_295; TARA_SAMEA6023884_MAG_00000019-scaffold_296; TARA_SAMEA6023884_MAG_00000019-scaffold_297; TARA_SAMEA6023884_MAG_00000019-scaffold_298; TARA_SAMEA6023884_MAG_00000019-scaffold_299; TARA_SAMEA6023884_MAG_00000019-scaffold_300; TARA_SAMEA6023884_MAG_00000019-scaffold_301; TARA_SAMEA6023884_MAG_00000019-scaffold_302; TARA_SAMEA6023884_MAG_00000019-scaffold_303; TARA_SAMEA6023884_MAG_00000019-scaffold_304; TARA_SAMEA6023884_MAG_00000019-scaffold_305; TARA_SAMEA6023884_MAG_00000019-scaffold_306; TARA_SAMEA6023884_MAG_00000019-scaffold_307; TARA_SAMEA6023884_MAG_00000019-scaffold_308; TARA_SAMEA6023884_MAG_00000019-scaffold_309; TARA_SAMEA6023884_MAG_00000019-scaffold_310; TARA_SAMEA6023884_MAG_00000019-scaffold_311; TARA_SAMEA6023884_MAG_00000019-scaffold_312; TARA_SAMEA6023884_MAG_00000019-scaffold_313; TARA_SAMEA6023884_MAG_00000019-scaffold_314; TARA_SAMEA6023884_MAG_00000019-scaffold_315; TARA_SAMEA6023884_MAG_00000019-scaffold_316; TARA_SAMEA6023884_MAG_00000019-scaffold_317; TARA_SAMEA6023884_MAG_00000019-scaffold_318; TARA_SAMEA6023884_MAG_00000019-scaffold_319; TARA_SAMEA6023884_MAG_00000019-scaffold_320; TARA_SAMEA6023884_MAG_00000019-scaffold_321; TARA_SAMEA6023884_MAG_00000019-scaffold_322; TARA_SAMEA6023884_MAG_00000019-scaffold_323; TARA_SAMEA6023884_MAG_00000019-scaffold_324; TARA_SAMEA6023884_MAG_00000019-scaffold_325; TARA_SAMEA6023884_MAG_00000019-scaffold_326; TARA_SAMEA6023884_MAG_00000019-scaffold_327; TARA_SAMEA6023884_MAG_00000019-scaffold_328; TARA_SAMEA6023884_MAG_00000019-scaffold_329; TARA_SAMEA6023884_MAG_00000019-scaffold_330; TARA_SAMEA6023884_MAG_00000019-scaffold_331; TARA_SAMEA6023884_MAG_00000019-scaffold_332; TARA_SAMEA6023884_MAG_00000019-scaffold_333; TARA_SAMEA6023884_MAG_00000019-scaffold_334; TARA_SAMEA6023884_MAG_00000019-scaffold_335

Compact view

TARA_SAMEA6023884_MAG_00000019-scaffold_1 - Region 1 - terpene

Download region GenBank file

Download region SVG

Location: 109,148 - 130,080 nt. (total: 20,933 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

TARA_SAMEA6023884_MAG_00000019-scaffold_7 - Region 1 - NRPS

Download region GenBank file

Download region SVG

Location: 50,029 - 102,182 nt. (total: 52,154 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

NRPS/PKS modules

Detailed domain annotation

Selected features only

Show module domains

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 50028 - 102182:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (D-X) + (pro) + (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6023884_MAG_00000019-scaffold_7_47

Search NORINE for peptide: strict or relaxed

AMP-binding (553..1023): X

NRPSPredictor2: (unknown)

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DVedIGAVEK
Nearest Stachelhaus code:: arg
Stachelhaus code match:: 80% (moderate)

TARA_SAMEA6023884_MAG_00000019-scaffold_7_48

Search NORINE for peptide: strict or relaxed

AMP-binding (501..960): pro

NRPSPredictor2: pro

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: pro, pip
Small clusters prediction:: pro
Single AA prediction:: pro

Stachelhaus prediction details:

Stachelhaus sequence:: DVQFIAqVVK
Nearest Stachelhaus code:: pro
Stachelhaus code match:: 90% (moderate)

TARA_SAMEA6023884_MAG_00000019-scaffold_7_49

Search NORINE for peptide: strict or relaxed

AMP-binding (553..983): X

NRPSPredictor2: asp, asn, glu, gln, aad

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DVenVGAItK
Nearest Stachelhaus code:: arg
Stachelhaus code match:: 70% (weak)

TARA_SAMEA6023884_MAG_00000019-scaffold_13 - Region 1 - indole

Download region GenBank file

Download region SVG

Location: 1 - 13,405 nt. (total: 13,405 nt) Show pHMM detection rules used

Region on contig edge.

indole: (indsynth or dmat or indole_PTase)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

TARA_SAMEA6023884_MAG_00000019-scaffold_14 - Region 1 - lanthipeptide-class-v

Download region GenBank file

Download region SVG

Location: 10,815 - 72,284 nt. (total: 61,470 nt) Show pHMM detection rules used

lanthipeptide-class-v: (APH and HopA1)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Lanthipeptides

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Lanthipeptides

Core peptide predictions

No core peptides found.

TARA_SAMEA6023884_MAG_00000019-scaffold_17 - Region 1 - NRPS

Download region GenBank file

Download region SVG

Location: 27,595 - 71,677 nt. (total: 44,083 nt) Show pHMM detection rules used

NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

NRPS/PKS modules

Detailed domain annotation

Selected features only

Show module domains

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 27594 - 71677:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (ser)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6023884_MAG_00000019-scaffold_17_38

Search NORINE for peptide: strict or relaxed

AMP-binding (491..905): ser

NRPSPredictor2: ser

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: ser, thr, dhpg, hpg
Small clusters prediction:: ser
Single AA prediction:: ser

Stachelhaus prediction details:

Stachelhaus sequence:: DVWHISLIDK
Nearest Stachelhaus code:: ser
Stachelhaus code match:: 100% (strong)

TARA_SAMEA6023884_MAG_00000019-scaffold_18 - Region 1 - NRPS,T1PKS

Download region GenBank file

Download region SVG

Location: 1 - 83,629 nt. (total: 83,629 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))
T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

NRPS/PKS modules

Detailed domain annotation

Selected features only

Show module domains

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 83629:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (D-ohmal) + (X) + (ohmal) + (gly) + (D-ohmal) + (X) + (X) + (ohmal) + (ohmal) + (ohmal) + (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6023884_MAG_00000019-scaffold_18_20

Search NORINE for peptide: strict or relaxed

AMP-binding (501..903): X

NRPSPredictor2: (unknown)

SVM prediction details:

NOTE: outside applicability domain

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: phe

Stachelhaus prediction details:

Stachelhaus sequence:: VDWivSLAnK
Nearest Stachelhaus code:: ala-b
Stachelhaus code match:: 70% (weak)

TARA_SAMEA6023884_MAG_00000019-scaffold_18_23

PKS_AT (535..837): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 87.5%; inactive: 83.3%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 155.7
inactive: 116.5
Methoxymalonyl-CoA: 58.7
Methylmalonyl-CoA: 43.2
Propionyl-CoA: 25.4
Isobutyryl-CoA: 22.3
CHC-CoA: 12.1
2-Methylbutyryl-CoA: 9.6
Ethylmalonyl-CoA: 9.2
trans-1,2-CPDA: 0.0
fatty_acid: 0.0
Benzoyl-CoA: 0.0
Acetyl-CoA: 0.0
3-Methylbutyryl-CoA: 0.0

TARA_SAMEA6023884_MAG_00000019-scaffold_18_24

PKS_AT (534..836): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 91.7%; inactive: 87.5%; 2-Rhyd-Malonyl-CoA: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 159.6
inactive: 120.6
Methoxymalonyl-CoA: 55.4
Methylmalonyl-CoA: 41.7
Propionyl-CoA: 23.9
Isobutyryl-CoA: 19.6
fatty_acid: 12.4
CHC-CoA: 9.9
Ethylmalonyl-CoA: 9.0
trans-1,2-CPDA: 0.0
Benzoyl-CoA: 0.0
Acetyl-CoA: 0.0
3-Methylbutyryl-CoA: 0.0
2-Methylbutyryl-CoA: 0.0

TARA_SAMEA6023884_MAG_00000019-scaffold_18_25

PKS_AT (549..850): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 95.8%; inactive: 91.7%; 2-Rhyd-Malonyl-CoA: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 163.3
inactive: 119.6
Methoxymalonyl-CoA: 56.7
Methylmalonyl-CoA: 46.5
Isobutyryl-CoA: 29.1
Propionyl-CoA: 26.4
2-Methylbutyryl-CoA: 12.1
CHC-CoA: 11.8
Ethylmalonyl-CoA: 9.6
trans-1,2-CPDA: 0.0
fatty_acid: 0.0
Benzoyl-CoA: 0.0
Acetyl-CoA: 0.0
3-Methylbutyryl-CoA: 0.0

TARA_SAMEA6023884_MAG_00000019-scaffold_18_28

Search NORINE for peptide: strict or relaxed

AMP-binding (540..959): X

NRPSPredictor2: (unknown)

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DvENiGvIsK
Nearest Stachelhaus code:: orn
Stachelhaus code match:: 60% (weak)

TARA_SAMEA6023884_MAG_00000019-scaffold_18_29

Search NORINE for peptide: strict or relaxed

AMP-binding (273..714): X

NRPSPredictor2: (unknown)

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DiWeMSadDK
Nearest Stachelhaus code:: ser
Stachelhaus code match:: 60% (weak)

TARA_SAMEA6023884_MAG_00000019-scaffold_18_34

PKS_AT (538..868): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 83.3%; inactive: 79.2%; 2-Rhyd-Malonyl-CoA: 58.3%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 152.5
inactive: 107.5
Methoxymalonyl-CoA: 69.9
Methylmalonyl-CoA: 48.0
Propionyl-CoA: 39.5
2-Methylbutyryl-CoA: 23.1
Isobutyryl-CoA: 22.4
Acetyl-CoA: 20.2
Ethylmalonyl-CoA: 19.5
trans-1,2-CPDA: 17.5
Benzoyl-CoA: 14.2
3-Methylbutyryl-CoA: 14.2
CHC-CoA: 12.0
fatty_acid: 0.0

TARA_SAMEA6023884_MAG_00000019-scaffold_18_35

Search NORINE for peptide: strict or relaxed

AMP-binding (496..892): gly

NRPSPredictor2: gly

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: gly, ala
Single AA prediction:: gly

Stachelhaus prediction details:

Stachelhaus sequence:: DILQLGMIWK
Nearest Stachelhaus code:: gly
Stachelhaus code match:: 100% (strong)

TARA_SAMEA6023884_MAG_00000019-scaffold_18_36

PKS_AT (535..829): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 95.8%; inactive: 91.7%; Methylmalonyl-CoA: 58.3%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 176.4
inactive: 124.4
Methoxymalonyl-CoA: 68.1
Methylmalonyl-CoA: 65.3
Propionyl-CoA: 42.6
Isobutyryl-CoA: 37.7
Ethylmalonyl-CoA: 35.5
Benzoyl-CoA: 27.8
Acetyl-CoA: 23.3
2-Methylbutyryl-CoA: 22.6
CHC-CoA: 18.8
trans-1,2-CPDA: 9.9
fatty_acid: 0.0
3-Methylbutyryl-CoA: 0.0

TARA_SAMEA6023884_MAG_00000019-scaffold_18_37

Search NORINE for peptide: strict or relaxed

AMP-binding (269..710): X

NRPSPredictor2: asp, asn, glu, gln, aad

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aromatic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DiWeMvadDK
Nearest Stachelhaus code:: ser
Stachelhaus code match:: 50% (weak)

TARA_SAMEA6023884_MAG_00000019-scaffold_18_39

PKS_AT (565..767): mal

ATSignature: (unknown)

No matches above 50%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 54.3
inactive: 45.9
Propionyl-CoA: 20.6
Methylmalonyl-CoA: 18.3
Methoxymalonyl-CoA: 15.6
CHC-CoA: 11.0
2-Methylbutyryl-CoA: 10.1
trans-1,2-CPDA: 0.0
fatty_acid: 0.0
Isobutyryl-CoA: 0.0
Ethylmalonyl-CoA: 0.0
Benzoyl-CoA: 0.0
Acetyl-CoA: 0.0
3-Methylbutyryl-CoA: 0.0

TARA_SAMEA6023884_MAG_00000019-scaffold_22 - Region 1 - NRPS,NRPS-like,T1PKS

Download region GenBank file

Download region SVG

Location: 227 - 79,177 nt. (total: 78,951 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))
T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))
NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

NRPS/PKS modules

Detailed domain annotation

Selected features only

Show module domains

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 226 - 79177:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (mal - X) + (D-tyr) + (ohmal) + (ohmal) + (ccmal) + (Me-ccmal) + (cys) + (cys) + (ala)

Direct lookup in NORINE database: strict or relaxed

For candidate cluster 2, location 226 - 47046:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (ohmal) + (D-tyr) + (mal - X)

Direct lookup in NORINE database: strict or relaxed

For candidate cluster 3, location 11879 - 79177:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (D-tyr) + (ohmal) + (ohmal) + (ccmal) + (Me-ccmal) + (cys) + (cys) + (ala)

Direct lookup in NORINE database: strict or relaxed

For candidate cluster 4, location 46752 - 79177:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (ohmal) + (ccmal) + (Me-ccmal) + (cys) + (cys) + (ala)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6023884_MAG_00000019-scaffold_22_2

Search NORINE for peptide: strict or relaxed

PKS_AT (532..825): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 91.7%; inactive: 87.5%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 211.1
inactive: 164.2
Methoxymalonyl-CoA: 78.3
Methylmalonyl-CoA: 73.1
Propionyl-CoA: 44.3
Isobutyryl-CoA: 42.7
Ethylmalonyl-CoA: 36.7
2-Methylbutyryl-CoA: 31.3
CHC-CoA: 19.0
Acetyl-CoA: 17.2
Benzoyl-CoA: 17.0
trans-1,2-CPDA: 13.3
3-Methylbutyryl-CoA: 11.0
fatty_acid: 0.0

AMP-binding (2500..2902): X

NRPSPredictor2: phe, trp, phg, tyr, bht

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aromatic
Large clusters prediction:: phe, trp, phg, tyr, bht
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DpWttGLIDK
Nearest Stachelhaus code:: gln
Stachelhaus code match:: 70% (weak)

TARA_SAMEA6023884_MAG_00000019-scaffold_22_4

CAL_domain (43..488): pk

minowa: NH2

Prediction, score:

NH2: 26.3
AHBA: 13.7
Acetyl-CoA: 1.0
shikimic_acid: 0.0
fatty_acid: 0.0

TARA_SAMEA6023884_MAG_00000019-scaffold_22_13

Search NORINE for peptide: strict or relaxed

AMP-binding (543..935): tyr

NRPSPredictor2: tyr

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aromatic
Large clusters prediction:: phe, trp, phg, tyr, bht
Small clusters prediction:: tyr, bht
Single AA prediction:: tyr

Stachelhaus prediction details:

Stachelhaus sequence:: DASTIAAVCK
Nearest Stachelhaus code:: tyr
Stachelhaus code match:: 100% (strong)

TARA_SAMEA6023884_MAG_00000019-scaffold_22_15

PKS_AT (536..846): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 87.5%; inactive: 83.3%; 2-Rhyd-Malonyl-CoA: 58.3%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 138.3
inactive: 121.4
Methoxymalonyl-CoA: 65.5
Methylmalonyl-CoA: 54.3
Isobutyryl-CoA: 49.4
Propionyl-CoA: 34.5
Ethylmalonyl-CoA: 24.8
Benzoyl-CoA: 23.7
3-Methylbutyryl-CoA: 10.6
CHC-CoA: 9.2
2-Methylbutyryl-CoA: 9.0
trans-1,2-CPDA: 0.0
fatty_acid: 0.0
Acetyl-CoA: 0.0

TARA_SAMEA6023884_MAG_00000019-scaffold_22_29

CAL_domain (184..471): pk

minowa: Acetyl-CoA

Prediction, score:

Acetyl-CoA: 19.9
NH2: 15.9
shikimic_acid: 0.0
fatty_acid: 0.0
AHBA: 0.0

PKS_AT (1232..1530): mal

ATSignature: Malonyl-CoA, inactive

Top 3 matches:: Malonyl-CoA: 87.5%; inactive: 87.5%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 195.0
inactive: 187.1
Methoxymalonyl-CoA: 54.2
Methylmalonyl-CoA: 48.9
Propionyl-CoA: 29.6
Isobutyryl-CoA: 22.8
Benzoyl-CoA: 22.7
Acetyl-CoA: 21.5
Ethylmalonyl-CoA: 17.8
CHC-CoA: 17.4
2-Methylbutyryl-CoA: 16.5
trans-1,2-CPDA: 9.8
fatty_acid: 0.0
3-Methylbutyryl-CoA: 0.0

TARA_SAMEA6023884_MAG_00000019-scaffold_22_30

PKS_AT (571..865): mal

ATSignature: Malonyl-CoA, inactive

Top 3 matches:: Malonyl-CoA: 91.7%; inactive: 91.7%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 191.4
inactive: 171.7
Methoxymalonyl-CoA: 59.0
Methylmalonyl-CoA: 51.3
Propionyl-CoA: 31.9
Acetyl-CoA: 19.8
Benzoyl-CoA: 17.5
2-Methylbutyryl-CoA: 16.1
Isobutyryl-CoA: 15.9
trans-1,2-CPDA: 13.8
CHC-CoA: 13.5
Ethylmalonyl-CoA: 9.9
fatty_acid: 0.0
3-Methylbutyryl-CoA: 0.0

TARA_SAMEA6023884_MAG_00000019-scaffold_22_31

PKS_AT (568..862): mal

ATSignature: Malonyl-CoA, inactive

Top 3 matches:: Malonyl-CoA: 91.7%; inactive: 91.7%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 191.4
inactive: 171.7
Methoxymalonyl-CoA: 59.0
Methylmalonyl-CoA: 51.3
Propionyl-CoA: 31.9
Acetyl-CoA: 19.8
Benzoyl-CoA: 17.5
2-Methylbutyryl-CoA: 16.1
Isobutyryl-CoA: 15.9
trans-1,2-CPDA: 13.8
CHC-CoA: 13.5
Ethylmalonyl-CoA: 9.9
fatty_acid: 0.0
3-Methylbutyryl-CoA: 0.0

TARA_SAMEA6023884_MAG_00000019-scaffold_22_32

Search NORINE for peptide: strict or relaxed

AMP-binding (542..942): cys

NRPSPredictor2: cys

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: cys
Small clusters prediction:: cys
Single AA prediction:: cys

Stachelhaus prediction details:

Stachelhaus sequence:: DLYNLSLIWK
Nearest Stachelhaus code:: cys
Stachelhaus code match:: 100% (strong)

TARA_SAMEA6023884_MAG_00000019-scaffold_22_33

Search NORINE for peptide: strict or relaxed

AMP-binding (526..927): cys

NRPSPredictor2: cys

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: cys
Small clusters prediction:: cys
Single AA prediction:: cys

Stachelhaus prediction details:

Stachelhaus sequence:: DmYnfGVLWK
Nearest Stachelhaus code:: thr
Stachelhaus code match:: 70% (weak)

TARA_SAMEA6023884_MAG_00000019-scaffold_22_34

Search NORINE for peptide: strict or relaxed

AMP-binding (539..929): ala

NRPSPredictor2: ala

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: gly, ala
Single AA prediction:: ala

Stachelhaus prediction details:

Stachelhaus sequence:: DLFNNALTYK
Nearest Stachelhaus code:: ala
Stachelhaus code match:: 100% (strong)

TARA_SAMEA6023884_MAG_00000019-scaffold_36 - Region 1 - ladderane

Download region GenBank file

Download region SVG

Location: 38,691 - 62,061 nt. (total: 23,371 nt) Show pHMM detection rules used

Region on contig edge.

ladderane: ladderane

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

TARA_SAMEA6023884_MAG_00000019-scaffold_45 - Region 1 - redox-cofactor

Download region GenBank file

Download region SVG

Location: 1 - 21,845 nt. (total: 21,845 nt) Show pHMM detection rules used

Region on contig edge.

redox-cofactor: (cds(PF04055 and (TIGR04085 or SPASM)) and (TIGR02111 or TIGR03966) and minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE]))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

TARA_SAMEA6023884_MAG_00000019-scaffold_51 - Region 1 - NRPS,PKS-like,T1PKS

Download region GenBank file

Download region SVG

Location: 1 - 53,364 nt. (total: 53,364 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))
NRPS: cds(Condensation and (AMP-binding or A-OX))
PKS-like: (t2pks2 or ksIII)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

NRPS/PKS modules

Detailed domain annotation

Selected features only

Show module domains

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 53364:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (cys) + (Me-ohmal) + (Me-cys) + (Me-redmal)

Direct lookup in NORINE database: strict or relaxed

For candidate cluster 2, location 0 - 24260:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (Me-cys) + (Me-redmal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6023884_MAG_00000019-scaffold_51_12

PKS_AT (558..855): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 95.8%; inactive: 91.7%; Methylmalonyl-CoA: 58.3%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 180.2
inactive: 118.7
Methoxymalonyl-CoA: 72.4
Methylmalonyl-CoA: 57.3
Propionyl-CoA: 41.7
Isobutyryl-CoA: 32.0
Ethylmalonyl-CoA: 25.9
2-Methylbutyryl-CoA: 24.6
CHC-CoA: 20.2
trans-1,2-CPDA: 19.5
Benzoyl-CoA: 18.4
fatty_acid: 12.3
Acetyl-CoA: 11.7
3-Methylbutyryl-CoA: 9.6

TARA_SAMEA6023884_MAG_00000019-scaffold_51_13

Search NORINE for peptide: strict or relaxed

AMP-binding (524..949): cys

NRPSPredictor2: cys

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: cys
Small clusters prediction:: cys
Single AA prediction:: cys

Stachelhaus prediction details:

Stachelhaus sequence:: DLYNLSLIWK
Nearest Stachelhaus code:: cys
Stachelhaus code match:: 100% (strong)

TARA_SAMEA6023884_MAG_00000019-scaffold_51_18

PKS_AT (526..849): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 83.3%; inactive: 79.2%; 2-Rhyd-Malonyl-CoA: 58.3%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 144.5
inactive: 93.5
Methoxymalonyl-CoA: 62.9
Methylmalonyl-CoA: 40.7
Isobutyryl-CoA: 33.2
Propionyl-CoA: 30.4
Benzoyl-CoA: 20.6
2-Methylbutyryl-CoA: 20.1
Ethylmalonyl-CoA: 16.7
CHC-CoA: 9.6
Acetyl-CoA: 9.5
trans-1,2-CPDA: 0.0
fatty_acid: 0.0
3-Methylbutyryl-CoA: 0.0

TARA_SAMEA6023884_MAG_00000019-scaffold_51_19

Search NORINE for peptide: strict or relaxed

AMP-binding (538..939): cys

NRPSPredictor2: cys

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: cys
Small clusters prediction:: cys
Single AA prediction:: cys

Stachelhaus prediction details:

Stachelhaus sequence:: DmYnfGVLWK
Nearest Stachelhaus code:: thr
Stachelhaus code match:: 70% (weak)

TARA_SAMEA6023884_MAG_00000019-scaffold_51_24

Search NORINE for peptide: strict or relaxed

AMP-binding (26..414): X

NRPSPredictor2: (unknown)

SVM prediction details:

NOTE: outside applicability domain

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: val

Stachelhaus prediction details:

Stachelhaus sequence:: aynFIAghIK
Nearest Stachelhaus code:: pro
Stachelhaus code match:: 50% (weak)

TARA_SAMEA6023884_MAG_00000019-scaffold_51_27

PKS_AT (37..342): mal

ATSignature: Malonyl-CoA, inactive

Top 3 matches:: Malonyl-CoA: 91.7%; inactive: 91.7%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 184.7
inactive: 150.8
Methylmalonyl-CoA: 81.4
Methoxymalonyl-CoA: 80.6
Propionyl-CoA: 67.3
Ethylmalonyl-CoA: 45.2
2-Methylbutyryl-CoA: 40.6
Isobutyryl-CoA: 34.0
CHC-CoA: 25.9
trans-1,2-CPDA: 19.7
Benzoyl-CoA: 15.6
fatty_acid: 14.9
Acetyl-CoA: 12.6
3-Methylbutyryl-CoA: 6.6

TARA_SAMEA6023884_MAG_00000019-scaffold_63 - Region 1 - NRPS,NRPS-like,T1PKS

Download region GenBank file

Download region SVG

Location: 1 - 45,954 nt. (total: 45,954 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))
NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))
T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

NRPS/PKS modules

Detailed domain annotation

Selected features only

Show module domains

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 45954:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (ccmal) + (D-thr - D-thr) + (gln) + (thr - asn - gln)

Direct lookup in NORINE database: strict or relaxed

For candidate cluster 2, location 17512 - 45954:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (ccmal) + (D-thr - D-thr) + (gln) + (thr - asn - gln)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6023884_MAG_00000019-scaffold_63_7

Search NORINE for peptide: strict or relaxed

AMP-binding (516..923): thr

NRPSPredictor2: thr

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: ser, thr, dhpg, hpg
Small clusters prediction:: thr
Single AA prediction:: thr

Stachelhaus prediction details:

Stachelhaus sequence:: DFWNIGMVHK
Nearest Stachelhaus code:: thr
Stachelhaus code match:: 100% (strong)

AMP-binding (1591..1990): asn

NRPSPredictor2: asn

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: asp, asn
Single AA prediction:: asn

Stachelhaus prediction details:

Stachelhaus sequence:: DaTKIGEVGK
Nearest Stachelhaus code:: asn
Stachelhaus code match:: 90% (moderate)

AMP-binding (2652..3054): gln

NRPSPredictor2: gln

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: glu, gln
Single AA prediction:: gln

Stachelhaus prediction details:

Stachelhaus sequence:: DAWQFGiIDK
Nearest Stachelhaus code:: gln
Stachelhaus code match:: 90% (moderate)

TARA_SAMEA6023884_MAG_00000019-scaffold_63_8

Search NORINE for peptide: strict or relaxed

AMP-binding (471..869): gln

NRPSPredictor2: gln

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: glu, gln
Single AA prediction:: gln

Stachelhaus prediction details:

Stachelhaus sequence:: DAWQFGLIDK
Nearest Stachelhaus code:: gln
Stachelhaus code match:: 100% (strong)

TARA_SAMEA6023884_MAG_00000019-scaffold_63_10

Search NORINE for peptide: strict or relaxed

AMP-binding (534..940): thr

NRPSPredictor2: thr

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: ser, thr, dhpg, hpg
Small clusters prediction:: thr
Single AA prediction:: thr

Stachelhaus prediction details:

Stachelhaus sequence:: DFWNIGMVHK
Nearest Stachelhaus code:: thr
Stachelhaus code match:: 100% (strong)

AMP-binding (2069..2475): thr

NRPSPredictor2: thr

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: ser, thr, dhpg, hpg
Small clusters prediction:: thr
Single AA prediction:: thr

Stachelhaus prediction details:

Stachelhaus sequence:: DFWNIGMVHK
Nearest Stachelhaus code:: thr
Stachelhaus code match:: 100% (strong)

TARA_SAMEA6023884_MAG_00000019-scaffold_63_12

CAL_domain (45..478): pk

minowa: fatty_acid

Prediction, score:

fatty_acid: 27.8
NH2: 27.6
AHBA: 17.6
Acetyl-CoA: 0.1
shikimic_acid: 0.0

PKS_AT (1224..1522): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 100.0%; inactive: 95.8%; 2-Rhyd-Malonyl-CoA: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 214.0
inactive: 189.8
Methoxymalonyl-CoA: 64.9
Methylmalonyl-CoA: 57.1
Propionyl-CoA: 38.5
Isobutyryl-CoA: 27.5
Acetyl-CoA: 22.9
Benzoyl-CoA: 20.5
2-Methylbutyryl-CoA: 19.6
Ethylmalonyl-CoA: 16.4
trans-1,2-CPDA: 15.6
CHC-CoA: 12.8
3-Methylbutyryl-CoA: 10.1
fatty_acid: 0.0

TARA_SAMEA6023884_MAG_00000019-scaffold_68 - Region 1 - cyanobactin

Download region GenBank file

Download region SVG

Location: 12,261 - 34,516 nt. (total: 22,256 nt) Show pHMM detection rules used

cyanobactin: (cyanobactin_synth or TIGR03678)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

TARA_SAMEA6023884_MAG_00000019-scaffold_88 - Region 1 - T1PKS,hglE-KS

Download region GenBank file

Download region SVG

Location: 1 - 35,988 nt. (total: 35,988 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))
hglE-KS: (hglE or hglD)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

NRPS/PKS modules

Detailed domain annotation

Selected features only

Show module domains

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 35988:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (mal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6023884_MAG_00000019-scaffold_88_16

PKS_AT (1070..1392): pk

ATSignature: (unknown)

No matches above 50%

minowa: Isobutyryl-CoA

Prediction, score:

Isobutyryl-CoA: 14.2
trans-1,2-CPDA: 0.0
inactive: 0.0
fatty_acid: 0.0
Propionyl-CoA: 0.0
Methylmalonyl-CoA: 0.0
Methoxymalonyl-CoA: 0.0
Malonyl-CoA: 0.0
Ethylmalonyl-CoA: 0.0
CHC-CoA: 0.0
Benzoyl-CoA: 0.0
Acetyl-CoA: 0.0
3-Methylbutyryl-CoA: 0.0
2-Methylbutyryl-CoA: 0.0

TARA_SAMEA6023884_MAG_00000019-scaffold_88_18

PKS_AT (625..923): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 79.2%; inactive: 70.8%; 2-Rhyd-Malonyl-CoA: 58.3%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 96.0
Methoxymalonyl-CoA: 43.5
inactive: 29.9
Methylmalonyl-CoA: 29.9
CHC-CoA: 16.4
Propionyl-CoA: 15.6
Isobutyryl-CoA: 13.9
fatty_acid: 9.5
trans-1,2-CPDA: 0.0
Ethylmalonyl-CoA: 0.0
Benzoyl-CoA: 0.0
Acetyl-CoA: 0.0
3-Methylbutyryl-CoA: 0.0
2-Methylbutyryl-CoA: 0.0

TARA_SAMEA6023884_MAG_00000019-scaffold_98 - Region 1 - NRPS,T1PKS

Download region GenBank file

Download region SVG

Location: 1 - 31,939 nt. (total: 31,939 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))
T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

NRPS/PKS modules

Detailed domain annotation

Selected features only

Show module domains

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 31939:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (thr - val) + (ser - gly) + (ohmal - cys)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6023884_MAG_00000019-scaffold_98_1

Search NORINE for peptide: strict or relaxed

CAL_domain (45..481): pk

minowa: NH2

Prediction, score:

NH2: 206.6
fatty_acid: 17.7
AHBA: 6.3
Acetyl-CoA: 2.1
shikimic_acid: 0.0

AMP-binding (1172..1583): thr

NRPSPredictor2: thr

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: ser, thr, dhpg, hpg
Small clusters prediction:: thr
Single AA prediction:: thr

Stachelhaus prediction details:

Stachelhaus sequence:: DFWNIGMVHK
Nearest Stachelhaus code:: thr
Stachelhaus code match:: 100% (strong)

AMP-binding (2280..2678): val

NRPSPredictor2: val

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: val

Stachelhaus prediction details:

Stachelhaus sequence:: DSaLiAEVwK
Nearest Stachelhaus code:: his
Stachelhaus code match:: 70% (weak)

TARA_SAMEA6023884_MAG_00000019-scaffold_98_6

Search NORINE for peptide: strict or relaxed

AMP-binding (460..859): ser

NRPSPredictor2: ser

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: ser, thr, dhpg, hpg
Small clusters prediction:: ser
Single AA prediction:: ser

Stachelhaus prediction details:

Stachelhaus sequence:: DVWHFSLIEK
Nearest Stachelhaus code:: ser
Stachelhaus code match:: 100% (strong)

AMP-binding (1516..1911): gly

NRPSPredictor2: gly

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: gly, ala
Single AA prediction:: gly

Stachelhaus prediction details:

Stachelhaus sequence:: DILQLGLIWK
Nearest Stachelhaus code:: gly
Stachelhaus code match:: 100% (strong)

TARA_SAMEA6023884_MAG_00000019-scaffold_98_7

Search NORINE for peptide: strict or relaxed

PKS_AT (538..827): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 95.8%; inactive: 91.7%; Methylmalonyl-CoA: 58.3%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 171.3
inactive: 112.2
Methoxymalonyl-CoA: 61.3
Methylmalonyl-CoA: 44.9
Propionyl-CoA: 31.8
Acetyl-CoA: 22.6
2-Methylbutyryl-CoA: 20.1
Isobutyryl-CoA: 18.1
fatty_acid: 15.2
CHC-CoA: 14.1
Benzoyl-CoA: 13.5
Ethylmalonyl-CoA: 10.2
trans-1,2-CPDA: 0.0
3-Methylbutyryl-CoA: 0.0

AMP-binding (1997..2395): cys

NRPSPredictor2: cys

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: cys
Small clusters prediction:: cys
Single AA prediction:: cys

Stachelhaus prediction details:

Stachelhaus sequence:: DLYNLSLIWK
Nearest Stachelhaus code:: cys
Stachelhaus code match:: 100% (strong)

TARA_SAMEA6023884_MAG_00000019-scaffold_99 - Region 1 - NRPS

Download region GenBank file

Download region SVG

Location: 1 - 31,911 nt. (total: 31,911 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

NRPS/PKS modules

Detailed domain annotation

Selected features only

Show module domains

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 31911:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X - X) + (D-X) + (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6023884_MAG_00000019-scaffold_99_14

Search NORINE for peptide: strict or relaxed

AMP-binding (537..936): X

NRPSPredictor2: orn, lys, arg

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: orn, lys, arg
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAWdnGcIDK
Nearest Stachelhaus code:: gln
Stachelhaus code match:: 70% (weak)

AMP-binding (1943..2349): X

NRPSPredictor2: (unknown)

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DVedIGAVEK
Nearest Stachelhaus code:: arg
Stachelhaus code match:: 80% (moderate)

TARA_SAMEA6023884_MAG_00000019-scaffold_99_18

Search NORINE for peptide: strict or relaxed

AMP-binding (508..913): X

NRPSPredictor2: asp, asn, glu, gln, aad

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DVeEIGvVtK
Nearest Stachelhaus code:: orn
Stachelhaus code match:: 70% (weak)

TARA_SAMEA6023884_MAG_00000019-scaffold_99_19

Search NORINE for peptide: strict or relaxed

AMP-binding (482..892): X

NRPSPredictor2: orn, lys, arg

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: orn, lys, arg
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DVenIGGvtK
Nearest Stachelhaus code:: val
Stachelhaus code match:: 60% (weak)

TARA_SAMEA6023884_MAG_00000019-scaffold_104 - Region 1 - PKS-like,T1PKS,T3PKS

Download region GenBank file

Download region SVG

Location: 1 - 31,114 nt. (total: 31,114 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))
PKS-like: (t2pks2 or ksIII)
T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

NRPS/PKS modules

Detailed domain annotation

Selected features only

Show module domains

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 31114:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (cys) + (cys) + (mal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6023884_MAG_00000019-scaffold_104_2

PKS_AT (938..1232): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 95.8%; inactive: 91.7%; 2-Rhyd-Malonyl-CoA: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 191.9
inactive: 183.2
Methoxymalonyl-CoA: 62.1
Methylmalonyl-CoA: 47.6
Benzoyl-CoA: 23.4
Propionyl-CoA: 22.8
Acetyl-CoA: 17.5
Isobutyryl-CoA: 13.8
3-Methylbutyryl-CoA: 13.0
trans-1,2-CPDA: 12.8
2-Methylbutyryl-CoA: 10.5
Ethylmalonyl-CoA: 10.3
fatty_acid: 0.0
CHC-CoA: 0.0

TARA_SAMEA6023884_MAG_00000019-scaffold_104_7

PKS_AT (561..861): mal

ATSignature: Malonyl-CoA, inactive

Top 3 matches:: Malonyl-CoA: 100.0%; inactive: 100.0%; 2-Rhyd-Malonyl-CoA: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 197.8
inactive: 192.2
Methoxymalonyl-CoA: 60.4
Methylmalonyl-CoA: 45.8
Propionyl-CoA: 30.0
Isobutyryl-CoA: 23.6
Benzoyl-CoA: 21.7
Acetyl-CoA: 19.9
trans-1,2-CPDA: 12.1
CHC-CoA: 10.1
2-Methylbutyryl-CoA: 9.7
Ethylmalonyl-CoA: 8.7
fatty_acid: 0.0
3-Methylbutyryl-CoA: 0.0

TARA_SAMEA6023884_MAG_00000019-scaffold_104_12

Search NORINE for peptide: strict or relaxed

AMP-binding (540..939): cys

NRPSPredictor2: cys

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: cys
Small clusters prediction:: cys
Single AA prediction:: cys

Stachelhaus prediction details:

Stachelhaus sequence:: DLYNLSLIWK
Nearest Stachelhaus code:: cys
Stachelhaus code match:: 100% (strong)

TARA_SAMEA6023884_MAG_00000019-scaffold_104_13

Search NORINE for peptide: strict or relaxed

AMP-binding (894..1294): cys

NRPSPredictor2: cys

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: cys
Small clusters prediction:: cys
Single AA prediction:: cys

Stachelhaus prediction details:

Stachelhaus sequence:: DLYNLSLIWK
Nearest Stachelhaus code:: cys
Stachelhaus code match:: 100% (strong)

TARA_SAMEA6023884_MAG_00000019-scaffold_128 - Region 1 - T1PKS

Download region GenBank file

Download region SVG

Location: 1 - 25,998 nt. (total: 25,998 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

NRPS/PKS modules

Detailed domain annotation

Selected features only

Show module domains

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 25998:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (Me-redmal) + (Me-pk) + (ohmal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6023884_MAG_00000019-scaffold_128_6

PKS_AT (569..874): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 87.5%; inactive: 79.2%; 2-Rhyd-Malonyl-CoA: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 154.0
inactive: 104.9
Methoxymalonyl-CoA: 63.1
Methylmalonyl-CoA: 44.7
Propionyl-CoA: 33.4
Ethylmalonyl-CoA: 23.7
Isobutyryl-CoA: 21.3
Benzoyl-CoA: 20.0
2-Methylbutyryl-CoA: 18.0
Acetyl-CoA: 15.9
fatty_acid: 15.5
CHC-CoA: 14.5
trans-1,2-CPDA: 0.0
3-Methylbutyryl-CoA: 0.0

TARA_SAMEA6023884_MAG_00000019-scaffold_128_7

PKS_AT (591..792): pk

ATSignature: (unknown)

No matches above 50%

minowa: inactive

Prediction, score:

inactive: 47.0
Malonyl-CoA: 38.7
trans-1,2-CPDA: 0.0
fatty_acid: 0.0
Propionyl-CoA: 0.0
Methylmalonyl-CoA: 0.0
Methoxymalonyl-CoA: 0.0
Isobutyryl-CoA: 0.0
Ethylmalonyl-CoA: 0.0
CHC-CoA: 0.0
Benzoyl-CoA: 0.0
Acetyl-CoA: 0.0
3-Methylbutyryl-CoA: 0.0
2-Methylbutyryl-CoA: 0.0

TARA_SAMEA6023884_MAG_00000019-scaffold_128_8

PKS_AT (580..886): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 95.8%; inactive: 91.7%; Propionyl-CoA: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 189.7
inactive: 183.2
Methoxymalonyl-CoA: 49.5
Methylmalonyl-CoA: 36.2
Propionyl-CoA: 20.2
Isobutyryl-CoA: 17.9
Benzoyl-CoA: 15.2
Acetyl-CoA: 11.6
trans-1,2-CPDA: 0.0
fatty_acid: 0.0
Ethylmalonyl-CoA: 0.0
CHC-CoA: 0.0
3-Methylbutyryl-CoA: 0.0
2-Methylbutyryl-CoA: 0.0

TARA_SAMEA6023884_MAG_00000019-scaffold_133 - Region 1 - NRPS

Download region GenBank file

Download region SVG

Location: 1 - 25,580 nt. (total: 25,580 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

NRPS/PKS modules

Detailed domain annotation

Selected features only

Show module domains

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 25580:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (D-asn) + (gly - D-val)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6023884_MAG_00000019-scaffold_133_5

Search NORINE for peptide: strict or relaxed

AMP-binding (522..1000): asn

NRPSPredictor2: asn

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: asp, asn
Single AA prediction:: asn

Stachelhaus prediction details:

Stachelhaus sequence:: DaTKIGEVGK
Nearest Stachelhaus code:: asn
Stachelhaus code match:: 90% (moderate)

TARA_SAMEA6023884_MAG_00000019-scaffold_133_6

Search NORINE for peptide: strict or relaxed

AMP-binding (468..916): gly

NRPSPredictor2: gly

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: gly, ala
Single AA prediction:: gly

Stachelhaus prediction details:

Stachelhaus sequence:: DILQLGLIWK
Nearest Stachelhaus code:: gly
Stachelhaus code match:: 100% (strong)

AMP-binding (1592..2034): val

NRPSPredictor2: val

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: val

Stachelhaus prediction details:

Stachelhaus sequence:: DAFWlGGTFK
Nearest Stachelhaus code:: val
Stachelhaus code match:: 90% (moderate)

TARA_SAMEA6023884_MAG_00000019-scaffold_138 - Region 1 - NRPS,T1PKS

Download region GenBank file

Download region SVG

Location: 1 - 25,131 nt. (total: 25,131 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))
NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

NRPS/PKS modules

Detailed domain annotation

Selected features only

Show module domains

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 25131:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (gly) + (ohmal) + (ala - cys)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6023884_MAG_00000019-scaffold_138_3

Search NORINE for peptide: strict or relaxed

AMP-binding (506..956): ala

NRPSPredictor2: ala

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: gly, ala
Single AA prediction:: ala

Stachelhaus prediction details:

Stachelhaus sequence:: DLFNNALTYK
Nearest Stachelhaus code:: ala
Stachelhaus code match:: 100% (strong)

AMP-binding (1649..2078): cys

NRPSPredictor2: cys

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: cys
Small clusters prediction:: cys
Single AA prediction:: cys

Stachelhaus prediction details:

Stachelhaus sequence:: DLYNLSLIWK
Nearest Stachelhaus code:: cys
Stachelhaus code match:: 100% (strong)

TARA_SAMEA6023884_MAG_00000019-scaffold_138_4

PKS_AT (559..849): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 91.7%; inactive: 83.3%; 2-Rhyd-Malonyl-CoA: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 144.4
inactive: 107.6
Methylmalonyl-CoA: 58.1
Methoxymalonyl-CoA: 57.4
Propionyl-CoA: 38.0
Benzoyl-CoA: 30.9
Isobutyryl-CoA: 27.3
Ethylmalonyl-CoA: 26.3
2-Methylbutyryl-CoA: 22.6
CHC-CoA: 18.4
Acetyl-CoA: 16.8
fatty_acid: 16.0
trans-1,2-CPDA: 15.4
3-Methylbutyryl-CoA: 10.2

TARA_SAMEA6023884_MAG_00000019-scaffold_138_9

Search NORINE for peptide: strict or relaxed

AMP-binding (459..912): gly

NRPSPredictor2: gly

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: gly, ala
Single AA prediction:: gly

Stachelhaus prediction details:

Stachelhaus sequence:: DILQLGLIWK
Nearest Stachelhaus code:: gly
Stachelhaus code match:: 100% (strong)

TARA_SAMEA6023884_MAG_00000019-scaffold_141 - Region 1 - NRPS

Download region GenBank file

Download region SVG

Location: 1 - 24,810 nt. (total: 24,810 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

NRPS/PKS modules

Detailed domain annotation

Selected features only

Show module domains

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 24810:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (ser) + (tyr)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6023884_MAG_00000019-scaffold_141_14

Search NORINE for peptide: strict or relaxed

AMP-binding (539..986): tyr

NRPSPredictor2: tyr

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aromatic
Large clusters prediction:: phe, trp, phg, tyr, bht
Small clusters prediction:: tyr, bht
Single AA prediction:: tyr

Stachelhaus prediction details:

Stachelhaus sequence:: DApTLGAvnK
Nearest Stachelhaus code:: bht
Stachelhaus code match:: 70% (weak)

TARA_SAMEA6023884_MAG_00000019-scaffold_141_15

Search NORINE for peptide: strict or relaxed

AMP-binding (472..897): ser

NRPSPredictor2: ser

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: ser, thr, dhpg, hpg
Small clusters prediction:: ser
Single AA prediction:: ser

Stachelhaus prediction details:

Stachelhaus sequence:: DVWHISLIDK
Nearest Stachelhaus code:: ser
Stachelhaus code match:: 100% (strong)

TARA_SAMEA6023884_MAG_00000019-scaffold_184 - Region 1 - NRPS

Download region GenBank file

Download region SVG

Location: 1 - 17,160 nt. (total: 17,160 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

NRPS/PKS modules

Detailed domain annotation

Selected features only

Show module domains

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 17160:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (D-phe) + (ile)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6023884_MAG_00000019-scaffold_184_5

Search NORINE for peptide: strict or relaxed

AMP-binding (543..953): phe

NRPSPredictor2: phe

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aromatic
Large clusters prediction:: phe, trp, phg, tyr, bht
Small clusters prediction:: phe, trp
Single AA prediction:: phe

Stachelhaus prediction details:

Stachelhaus sequence:: DAWtIAAVCK
Nearest Stachelhaus code:: phe
Stachelhaus code match:: 90% (moderate)

TARA_SAMEA6023884_MAG_00000019-scaffold_184_6

Search NORINE for peptide: strict or relaxed

AMP-binding (480..880): ile

NRPSPredictor2: ile

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: ile

Stachelhaus prediction details:

Stachelhaus sequence:: DAFFmGVTFK
Nearest Stachelhaus code:: ile
Stachelhaus code match:: 90% (moderate)

TARA_SAMEA6023884_MAG_00000019-scaffold_196 - Region 1 - NRPS

Download region GenBank file

Download region SVG

Location: 1 - 15,859 nt. (total: 15,859 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

NRPS/PKS modules

Detailed domain annotation

Selected features only

Show module domains

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 15859:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (D-ala) + (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6023884_MAG_00000019-scaffold_196_1

Search NORINE for peptide: strict or relaxed

AMP-binding (267..703): X

NRPSPredictor2: hydrophobic-aromatic

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aromatic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DiWeMvadDK
Nearest Stachelhaus code:: ser
Stachelhaus code match:: 50% (weak)

TARA_SAMEA6023884_MAG_00000019-scaffold_196_3

Search NORINE for peptide: strict or relaxed

CAL_domain (46..490): pk

minowa: NH2

Prediction, score:

NH2: 28.7
fatty_acid: 23.8
AHBA: 7.8
Acetyl-CoA: 0.2
shikimic_acid: 0.0

AMP-binding (1158..1551): ala

NRPSPredictor2: ala

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: gly, ala
Single AA prediction:: ala

Stachelhaus prediction details:

Stachelhaus sequence:: DLFNNALTYK
Nearest Stachelhaus code:: ala
Stachelhaus code match:: 100% (strong)

TARA_SAMEA6023884_MAG_00000019-scaffold_203 - Region 1 - NRPS,T1PKS

Download region GenBank file

Download region SVG

Location: 1 - 15,100 nt. (total: 15,100 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))
NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

NRPS/PKS modules

Detailed domain annotation

Selected features only

Show module domains

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 15100:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X - X) + (ohmal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6023884_MAG_00000019-scaffold_203_1

PKS_AT (532..827): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 91.7%; inactive: 83.3%; Methylmalonyl-CoA: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 150.3
inactive: 109.9
Methoxymalonyl-CoA: 53.8
Methylmalonyl-CoA: 45.2
Propionyl-CoA: 38.7
2-Methylbutyryl-CoA: 24.5
CHC-CoA: 23.1
Benzoyl-CoA: 20.9
Ethylmalonyl-CoA: 19.9
Isobutyryl-CoA: 17.2
Acetyl-CoA: 13.9
trans-1,2-CPDA: 13.6
fatty_acid: 0.0
3-Methylbutyryl-CoA: 0.0

TARA_SAMEA6023884_MAG_00000019-scaffold_203_2

Search NORINE for peptide: strict or relaxed

AMP-binding (534..935): X

NRPSPredictor2: hydrophobic-aliphatic

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DlwYLGgiCK
Nearest Stachelhaus code:: leu
Stachelhaus code match:: 60% (weak)

AMP-binding (1595..1996): X

NRPSPredictor2: hydrophobic-aliphatic

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DlwYLGgiCK
Nearest Stachelhaus code:: leu
Stachelhaus code match:: 60% (weak)

TARA_SAMEA6023884_MAG_00000019-scaffold_219 - Region 1 - NRPS-like

Download region GenBank file

Download region SVG

Location: 1 - 13,450 nt. (total: 13,450 nt) Show pHMM detection rules used

Region on contig edge.

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

TARA_SAMEA6023884_MAG_00000019-scaffold_221 - Region 1 - NRPS

Download region GenBank file

Download region SVG

Location: 1 - 13,317 nt. (total: 13,317 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

NRPS/PKS modules

Detailed domain annotation

Selected features only

Show module domains

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 13317:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (gly)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6023884_MAG_00000019-scaffold_221_1

Search NORINE for peptide: strict or relaxed

CAL_domain (188..511): pk

minowa: NH2

Prediction, score:

NH2: 156.6
Acetyl-CoA: 44.9
AHBA: 21.3
fatty_acid: 14.5
shikimic_acid: 8.5

AMP-binding (1183..1578): gly

NRPSPredictor2: gly

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: gly, ala
Single AA prediction:: gly

Stachelhaus prediction details:

Stachelhaus sequence:: DILQLGLIWK
Nearest Stachelhaus code:: gly
Stachelhaus code match:: 100% (strong)

TARA_SAMEA6023884_MAG_00000019-scaffold_221_2

PKS_AT (93..420): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 83.3%; inactive: 75.0%; 2-Rhyd-Malonyl-CoA: 62.5%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 134.4
inactive: 92.4
Methoxymalonyl-CoA: 66.1
Methylmalonyl-CoA: 46.6
Isobutyryl-CoA: 42.3
Benzoyl-CoA: 38.3
Propionyl-CoA: 23.7
fatty_acid: 15.3
Acetyl-CoA: 11.5
2-Methylbutyryl-CoA: 10.2
Ethylmalonyl-CoA: 10.1
CHC-CoA: 9.1
trans-1,2-CPDA: 0.0
3-Methylbutyryl-CoA: 0.0

TARA_SAMEA6023884_MAG_00000019-scaffold_229 - Region 1 - NRPS

Download region GenBank file

Download region SVG

Location: 1 - 12,451 nt. (total: 12,451 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

NRPS/PKS modules

Detailed domain annotation

Selected features only

Show module domains

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 12451:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (gly - D-ala)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6023884_MAG_00000019-scaffold_229_1

Search NORINE for peptide: strict or relaxed

AMP-binding (495..939): gly

NRPSPredictor2: gly

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: gly, ala
Single AA prediction:: gly

Stachelhaus prediction details:

Stachelhaus sequence:: DILQLGLIWK
Nearest Stachelhaus code:: gly
Stachelhaus code match:: 100% (strong)

AMP-binding (1617..2069): ala

NRPSPredictor2: ala

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: gly, ala
Single AA prediction:: ala

Stachelhaus prediction details:

Stachelhaus sequence:: DLFNNALTYK
Nearest Stachelhaus code:: ala
Stachelhaus code match:: 100% (strong)

TARA_SAMEA6023884_MAG_00000019-scaffold_251 - Region 1 - PKS-like,T3PKS

Download region GenBank file

Download region SVG

Location: 1 - 10,196 nt. (total: 10,196 nt) Show pHMM detection rules used

Region on contig edge.

PKS-like: (t2pks2 or ksIII)
T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

TARA_SAMEA6023884_MAG_00000019-scaffold_266 - Region 1 - NRPS

Download region GenBank file

Download region SVG

Location: 1 - 9,357 nt. (total: 9,357 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

NRPS/PKS modules

Detailed domain annotation

Selected features only

Show module domains

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 9357:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (gln)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6023884_MAG_00000019-scaffold_266_1

Search NORINE for peptide: strict or relaxed

AMP-binding (325..725): gln

NRPSPredictor2: gln

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: glu, gln
Single AA prediction:: gln

Stachelhaus prediction details:

Stachelhaus sequence:: DAWQFGLIDK
Nearest Stachelhaus code:: gln
Stachelhaus code match:: 100% (strong)

TARA_SAMEA6023884_MAG_00000019-scaffold_274 - Region 1 - T1PKS

Download region GenBank file

Download region SVG

Location: 1 - 8,600 nt. (total: 8,600 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

NRPS/PKS modules

Detailed domain annotation

Selected features only

Show module domains

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 8600:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (Me-ohmal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6023884_MAG_00000019-scaffold_274_3

PKS_AT (554..848): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 95.8%; inactive: 91.7%; 2-Rhyd-Malonyl-CoA: 58.3%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 208.2
inactive: 197.7
Methoxymalonyl-CoA: 67.0
Methylmalonyl-CoA: 59.9
Propionyl-CoA: 46.8
Isobutyryl-CoA: 31.9
2-Methylbutyryl-CoA: 28.0
Benzoyl-CoA: 26.9
Ethylmalonyl-CoA: 20.8
CHC-CoA: 18.8
Acetyl-CoA: 17.4
trans-1,2-CPDA: 17.0
fatty_acid: 0.0
3-Methylbutyryl-CoA: 0.0