TARA_SAMEA6023455_MAG_00000007 - 54 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

TARA_SAMEA6023455_MAG_00000007-scaffold_1

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	terpene	10,466	31,557

TARA_SAMEA6023455_MAG_00000007-scaffold_3

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	NRPS-like	44,981	87,698

TARA_SAMEA6023455_MAG_00000007-scaffold_5

Region	Type	From	To	Most similar known cluster		Similarity
Region 5.1	T1PKS,NRPS,NRPS-like	37,404	97,506

TARA_SAMEA6023455_MAG_00000007-scaffold_11

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	lanthipeptide-class-iv	1,395	24,121

TARA_SAMEA6023455_MAG_00000007-scaffold_14

Region	Type	From	To	Most similar known cluster		Similarity
Region 14.1	lassopeptide	10,022	32,409

TARA_SAMEA6023455_MAG_00000007-scaffold_15

Region	Type	From	To	Most similar known cluster		Similarity
Region 15.1	ladderane,T1PKS	1,401	59,900

TARA_SAMEA6023455_MAG_00000007-scaffold_27

Region	Type	From	To	Most similar known cluster		Similarity
Region 27.1	NRPS-like,RiPP-like	1	24,351

TARA_SAMEA6023455_MAG_00000007-scaffold_30

Region	Type	From	To	Most similar known cluster		Similarity
Region 30.1	NRPS,T1PKS	1	63,708

TARA_SAMEA6023455_MAG_00000007-scaffold_32

Region	Type	From	To	Most similar known cluster		Similarity
Region 32.1	lanthipeptide-class-v	27,234	60,082

TARA_SAMEA6023455_MAG_00000007-scaffold_33

Region	Type	From	To	Most similar known cluster		Similarity
Region 33.1	NRPS	1	38,246

TARA_SAMEA6023455_MAG_00000007-scaffold_34

Region	Type	From	To	Most similar known cluster		Similarity
Region 34.1	T1PKS,NRPS	1	34,813

TARA_SAMEA6023455_MAG_00000007-scaffold_35

Region	Type	From	To	Most similar known cluster		Similarity
Region 35.1	NRPS,RiPP-like	11,700	56,234

TARA_SAMEA6023455_MAG_00000007-scaffold_38

Region	Type	From	To	Most similar known cluster		Similarity
Region 38.1	cyanobactin	1	13,603

TARA_SAMEA6023455_MAG_00000007-scaffold_40

Region	Type	From	To	Most similar known cluster		Similarity
Region 40.1	lanthipeptide-class-i	34,362	52,826

TARA_SAMEA6023455_MAG_00000007-scaffold_41

Region	Type	From	To	Most similar known cluster		Similarity
Region 41.1	NRPS	1	50,507

TARA_SAMEA6023455_MAG_00000007-scaffold_42

Region	Type	From	To	Most similar known cluster		Similarity
Region 42.1	NRPS	8,391	51,980

TARA_SAMEA6023455_MAG_00000007-scaffold_46

Region	Type	From	To	Most similar known cluster		Similarity
Region 46.1	NRPS	1	49,623

TARA_SAMEA6023455_MAG_00000007-scaffold_47

Region	Type	From	To	Most similar known cluster		Similarity
Region 47.1	NRPS	1	49,000

TARA_SAMEA6023455_MAG_00000007-scaffold_48

Region	Type	From	To	Most similar known cluster		Similarity
Region 48.1	NRPS	1	48,480

TARA_SAMEA6023455_MAG_00000007-scaffold_49

Region	Type	From	To	Most similar known cluster		Similarity
Region 49.1	NRPS	1	33,820

TARA_SAMEA6023455_MAG_00000007-scaffold_51

Region	Type	From	To	Most similar known cluster		Similarity
Region 51.1	T1PKS	9,567	47,526

TARA_SAMEA6023455_MAG_00000007-scaffold_54

Region	Type	From	To	Most similar known cluster		Similarity
Region 54.1	NRPS	1	41,411

TARA_SAMEA6023455_MAG_00000007-scaffold_60

Region	Type	From	To	Most similar known cluster		Similarity
Region 60.1	NRPS-like	1	24,287

TARA_SAMEA6023455_MAG_00000007-scaffold_61

Region	Type	From	To	Most similar known cluster		Similarity
Region 61.1	phosphonate	1	37,216

TARA_SAMEA6023455_MAG_00000007-scaffold_62

Region	Type	From	To	Most similar known cluster		Similarity
Region 62.1	NRPS	1	42,470

TARA_SAMEA6023455_MAG_00000007-scaffold_66

Region	Type	From	To	Most similar known cluster		Similarity
Region 66.1	NRPS	11,355	40,361

TARA_SAMEA6023455_MAG_00000007-scaffold_74

Region	Type	From	To	Most similar known cluster		Similarity
Region 74.1	NRPS	1	39,014

TARA_SAMEA6023455_MAG_00000007-scaffold_77

Region	Type	From	To	Most similar known cluster		Similarity
Region 77.1	NRPS	1	38,029

TARA_SAMEA6023455_MAG_00000007-scaffold_81

Region	Type	From	To	Most similar known cluster		Similarity
Region 81.1	NRPS,T1PKS	1	37,136

TARA_SAMEA6023455_MAG_00000007-scaffold_82

Region	Type	From	To	Most similar known cluster		Similarity
Region 82.1	terpene	1	12,496

TARA_SAMEA6023455_MAG_00000007-scaffold_86

Region	Type	From	To	Most similar known cluster		Similarity
Region 86.1	cyanobactin	1	17,482

TARA_SAMEA6023455_MAG_00000007-scaffold_93

Region	Type	From	To	Most similar known cluster		Similarity
Region 93.1	NRPS-like	4,553	32,869

TARA_SAMEA6023455_MAG_00000007-scaffold_96

Region	Type	From	To	Most similar known cluster		Similarity
Region 96.1	NRPS,T1PKS	1	32,304

TARA_SAMEA6023455_MAG_00000007-scaffold_101

Region	Type	From	To	Most similar known cluster		Similarity
Region 101.1	NRPS,T1PKS	1	30,920

TARA_SAMEA6023455_MAG_00000007-scaffold_118

Region	Type	From	To	Most similar known cluster		Similarity
Region 118.1	NRPS,T1PKS	1	27,304

TARA_SAMEA6023455_MAG_00000007-scaffold_131

Region	Type	From	To	Most similar known cluster		Similarity
Region 131.1	NRPS	1	25,105

TARA_SAMEA6023455_MAG_00000007-scaffold_134

Region	Type	From	To	Most similar known cluster		Similarity
Region 134.1	NRPS	1	24,793

TARA_SAMEA6023455_MAG_00000007-scaffold_143

Region	Type	From	To	Most similar known cluster		Similarity
Region 143.1	NRPS-like,T1PKS	1	23,222

TARA_SAMEA6023455_MAG_00000007-scaffold_145

Region	Type	From	To	Most similar known cluster		Similarity
Region 145.1	T3PKS	1	22,843

TARA_SAMEA6023455_MAG_00000007-scaffold_154

Region	Type	From	To	Most similar known cluster		Similarity
Region 154.1	T1PKS,NRPS-like,NRPS	1	21,222

TARA_SAMEA6023455_MAG_00000007-scaffold_155

Region	Type	From	To	Most similar known cluster		Similarity
Region 155.1	NRPS-like	1	21,185

TARA_SAMEA6023455_MAG_00000007-scaffold_168

Region	Type	From	To	Most similar known cluster		Similarity
Region 168.1	NRPS	1	19,677

TARA_SAMEA6023455_MAG_00000007-scaffold_171

Region	Type	From	To	Most similar known cluster		Similarity
Region 171.1	NRPS	1	18,992

TARA_SAMEA6023455_MAG_00000007-scaffold_176

Region	Type	From	To	Most similar known cluster		Similarity
Region 176.1	NRPS-like,T1PKS	1	18,431

TARA_SAMEA6023455_MAG_00000007-scaffold_178

Region	Type	From	To	Most similar known cluster		Similarity
Region 178.1	RiPP-like	1	7,021

TARA_SAMEA6023455_MAG_00000007-scaffold_198

Region	Type	From	To	Most similar known cluster		Similarity
Region 198.1	T1PKS	1	14,659

TARA_SAMEA6023455_MAG_00000007-scaffold_214

Region	Type	From	To	Most similar known cluster		Similarity
Region 214.1	RiPP-like	1	7,059

TARA_SAMEA6023455_MAG_00000007-scaffold_217

Region	Type	From	To	Most similar known cluster		Similarity
Region 217.1	NRPS-like	1	12,554

TARA_SAMEA6023455_MAG_00000007-scaffold_228

Region	Type	From	To	Most similar known cluster		Similarity
Region 228.1	NRPS	1	11,557

TARA_SAMEA6023455_MAG_00000007-scaffold_229

Region	Type	From	To	Most similar known cluster		Similarity
Region 229.1	RiPP-like	3,985	11,548

TARA_SAMEA6023455_MAG_00000007-scaffold_240

Region	Type	From	To	Most similar known cluster		Similarity
Region 240.1	NRPS	1	10,487

TARA_SAMEA6023455_MAG_00000007-scaffold_264

Region	Type	From	To	Most similar known cluster		Similarity
Region 264.1	RiPP-like	1	7,339

TARA_SAMEA6023455_MAG_00000007-scaffold_278

Region	Type	From	To	Most similar known cluster		Similarity
Region 278.1	NRPS	1	6,790

TARA_SAMEA6023455_MAG_00000007-scaffold_286

Region	Type	From	To	Most similar known cluster		Similarity
Region 286.1	NRPS-like	1	5,672

No secondary metabolite regions were found in these records:: TARA_SAMEA6023455_MAG_00000007-scaffold_2; TARA_SAMEA6023455_MAG_00000007-scaffold_4; TARA_SAMEA6023455_MAG_00000007-scaffold_6; TARA_SAMEA6023455_MAG_00000007-scaffold_7; TARA_SAMEA6023455_MAG_00000007-scaffold_8; TARA_SAMEA6023455_MAG_00000007-scaffold_9; TARA_SAMEA6023455_MAG_00000007-scaffold_10; TARA_SAMEA6023455_MAG_00000007-scaffold_12; TARA_SAMEA6023455_MAG_00000007-scaffold_13; TARA_SAMEA6023455_MAG_00000007-scaffold_16; TARA_SAMEA6023455_MAG_00000007-scaffold_17; TARA_SAMEA6023455_MAG_00000007-scaffold_18; TARA_SAMEA6023455_MAG_00000007-scaffold_19; TARA_SAMEA6023455_MAG_00000007-scaffold_20; TARA_SAMEA6023455_MAG_00000007-scaffold_21; TARA_SAMEA6023455_MAG_00000007-scaffold_22; TARA_SAMEA6023455_MAG_00000007-scaffold_23; TARA_SAMEA6023455_MAG_00000007-scaffold_24; TARA_SAMEA6023455_MAG_00000007-scaffold_25; TARA_SAMEA6023455_MAG_00000007-scaffold_26; TARA_SAMEA6023455_MAG_00000007-scaffold_28; TARA_SAMEA6023455_MAG_00000007-scaffold_29; TARA_SAMEA6023455_MAG_00000007-scaffold_31; TARA_SAMEA6023455_MAG_00000007-scaffold_36; TARA_SAMEA6023455_MAG_00000007-scaffold_37; TARA_SAMEA6023455_MAG_00000007-scaffold_39; TARA_SAMEA6023455_MAG_00000007-scaffold_43; TARA_SAMEA6023455_MAG_00000007-scaffold_44; TARA_SAMEA6023455_MAG_00000007-scaffold_45; TARA_SAMEA6023455_MAG_00000007-scaffold_50; TARA_SAMEA6023455_MAG_00000007-scaffold_52; TARA_SAMEA6023455_MAG_00000007-scaffold_53; TARA_SAMEA6023455_MAG_00000007-scaffold_55; TARA_SAMEA6023455_MAG_00000007-scaffold_56; TARA_SAMEA6023455_MAG_00000007-scaffold_57; TARA_SAMEA6023455_MAG_00000007-scaffold_58; TARA_SAMEA6023455_MAG_00000007-scaffold_59; TARA_SAMEA6023455_MAG_00000007-scaffold_63; TARA_SAMEA6023455_MAG_00000007-scaffold_64; TARA_SAMEA6023455_MAG_00000007-scaffold_65; TARA_SAMEA6023455_MAG_00000007-scaffold_67; TARA_SAMEA6023455_MAG_00000007-scaffold_68; TARA_SAMEA6023455_MAG_00000007-scaffold_69; TARA_SAMEA6023455_MAG_00000007-scaffold_70; TARA_SAMEA6023455_MAG_00000007-scaffold_71; TARA_SAMEA6023455_MAG_00000007-scaffold_72; TARA_SAMEA6023455_MAG_00000007-scaffold_73; TARA_SAMEA6023455_MAG_00000007-scaffold_75; TARA_SAMEA6023455_MAG_00000007-scaffold_76; TARA_SAMEA6023455_MAG_00000007-scaffold_78; TARA_SAMEA6023455_MAG_00000007-scaffold_79; TARA_SAMEA6023455_MAG_00000007-scaffold_80; TARA_SAMEA6023455_MAG_00000007-scaffold_83; TARA_SAMEA6023455_MAG_00000007-scaffold_84; TARA_SAMEA6023455_MAG_00000007-scaffold_85; TARA_SAMEA6023455_MAG_00000007-scaffold_87; TARA_SAMEA6023455_MAG_00000007-scaffold_88; TARA_SAMEA6023455_MAG_00000007-scaffold_89; TARA_SAMEA6023455_MAG_00000007-scaffold_90; TARA_SAMEA6023455_MAG_00000007-scaffold_91; TARA_SAMEA6023455_MAG_00000007-scaffold_92; TARA_SAMEA6023455_MAG_00000007-scaffold_94; TARA_SAMEA6023455_MAG_00000007-scaffold_95; TARA_SAMEA6023455_MAG_00000007-scaffold_97; TARA_SAMEA6023455_MAG_00000007-scaffold_98; TARA_SAMEA6023455_MAG_00000007-scaffold_99; TARA_SAMEA6023455_MAG_00000007-scaffold_100; TARA_SAMEA6023455_MAG_00000007-scaffold_102; TARA_SAMEA6023455_MAG_00000007-scaffold_103; TARA_SAMEA6023455_MAG_00000007-scaffold_104; TARA_SAMEA6023455_MAG_00000007-scaffold_105; TARA_SAMEA6023455_MAG_00000007-scaffold_106; TARA_SAMEA6023455_MAG_00000007-scaffold_107; TARA_SAMEA6023455_MAG_00000007-scaffold_108; TARA_SAMEA6023455_MAG_00000007-scaffold_109; TARA_SAMEA6023455_MAG_00000007-scaffold_110; TARA_SAMEA6023455_MAG_00000007-scaffold_111; TARA_SAMEA6023455_MAG_00000007-scaffold_112; TARA_SAMEA6023455_MAG_00000007-scaffold_113; TARA_SAMEA6023455_MAG_00000007-scaffold_114; TARA_SAMEA6023455_MAG_00000007-scaffold_115; TARA_SAMEA6023455_MAG_00000007-scaffold_116; TARA_SAMEA6023455_MAG_00000007-scaffold_117; TARA_SAMEA6023455_MAG_00000007-scaffold_119; TARA_SAMEA6023455_MAG_00000007-scaffold_120; TARA_SAMEA6023455_MAG_00000007-scaffold_121; TARA_SAMEA6023455_MAG_00000007-scaffold_122; TARA_SAMEA6023455_MAG_00000007-scaffold_123; TARA_SAMEA6023455_MAG_00000007-scaffold_124; TARA_SAMEA6023455_MAG_00000007-scaffold_125; TARA_SAMEA6023455_MAG_00000007-scaffold_126; TARA_SAMEA6023455_MAG_00000007-scaffold_127; TARA_SAMEA6023455_MAG_00000007-scaffold_128; TARA_SAMEA6023455_MAG_00000007-scaffold_129; TARA_SAMEA6023455_MAG_00000007-scaffold_130; TARA_SAMEA6023455_MAG_00000007-scaffold_132; TARA_SAMEA6023455_MAG_00000007-scaffold_133; TARA_SAMEA6023455_MAG_00000007-scaffold_135; TARA_SAMEA6023455_MAG_00000007-scaffold_136; TARA_SAMEA6023455_MAG_00000007-scaffold_137; TARA_SAMEA6023455_MAG_00000007-scaffold_138; TARA_SAMEA6023455_MAG_00000007-scaffold_139; TARA_SAMEA6023455_MAG_00000007-scaffold_140; TARA_SAMEA6023455_MAG_00000007-scaffold_141; TARA_SAMEA6023455_MAG_00000007-scaffold_142; TARA_SAMEA6023455_MAG_00000007-scaffold_144; TARA_SAMEA6023455_MAG_00000007-scaffold_146; TARA_SAMEA6023455_MAG_00000007-scaffold_147; TARA_SAMEA6023455_MAG_00000007-scaffold_148; TARA_SAMEA6023455_MAG_00000007-scaffold_149; TARA_SAMEA6023455_MAG_00000007-scaffold_150; TARA_SAMEA6023455_MAG_00000007-scaffold_151; TARA_SAMEA6023455_MAG_00000007-scaffold_152; TARA_SAMEA6023455_MAG_00000007-scaffold_153; TARA_SAMEA6023455_MAG_00000007-scaffold_156; TARA_SAMEA6023455_MAG_00000007-scaffold_157; TARA_SAMEA6023455_MAG_00000007-scaffold_158; TARA_SAMEA6023455_MAG_00000007-scaffold_159; TARA_SAMEA6023455_MAG_00000007-scaffold_160; TARA_SAMEA6023455_MAG_00000007-scaffold_161; TARA_SAMEA6023455_MAG_00000007-scaffold_162; TARA_SAMEA6023455_MAG_00000007-scaffold_163; TARA_SAMEA6023455_MAG_00000007-scaffold_164; TARA_SAMEA6023455_MAG_00000007-scaffold_165; TARA_SAMEA6023455_MAG_00000007-scaffold_166; TARA_SAMEA6023455_MAG_00000007-scaffold_167; TARA_SAMEA6023455_MAG_00000007-scaffold_169; TARA_SAMEA6023455_MAG_00000007-scaffold_170; TARA_SAMEA6023455_MAG_00000007-scaffold_172; TARA_SAMEA6023455_MAG_00000007-scaffold_173; TARA_SAMEA6023455_MAG_00000007-scaffold_174; TARA_SAMEA6023455_MAG_00000007-scaffold_175; TARA_SAMEA6023455_MAG_00000007-scaffold_177; TARA_SAMEA6023455_MAG_00000007-scaffold_179; TARA_SAMEA6023455_MAG_00000007-scaffold_180; TARA_SAMEA6023455_MAG_00000007-scaffold_181; TARA_SAMEA6023455_MAG_00000007-scaffold_182; TARA_SAMEA6023455_MAG_00000007-scaffold_183; TARA_SAMEA6023455_MAG_00000007-scaffold_184; TARA_SAMEA6023455_MAG_00000007-scaffold_185; TARA_SAMEA6023455_MAG_00000007-scaffold_186; TARA_SAMEA6023455_MAG_00000007-scaffold_187; TARA_SAMEA6023455_MAG_00000007-scaffold_188; TARA_SAMEA6023455_MAG_00000007-scaffold_189; TARA_SAMEA6023455_MAG_00000007-scaffold_190; TARA_SAMEA6023455_MAG_00000007-scaffold_191; TARA_SAMEA6023455_MAG_00000007-scaffold_192; TARA_SAMEA6023455_MAG_00000007-scaffold_193; TARA_SAMEA6023455_MAG_00000007-scaffold_194; TARA_SAMEA6023455_MAG_00000007-scaffold_195; TARA_SAMEA6023455_MAG_00000007-scaffold_196; TARA_SAMEA6023455_MAG_00000007-scaffold_197; TARA_SAMEA6023455_MAG_00000007-scaffold_199; TARA_SAMEA6023455_MAG_00000007-scaffold_200; TARA_SAMEA6023455_MAG_00000007-scaffold_201; TARA_SAMEA6023455_MAG_00000007-scaffold_202; TARA_SAMEA6023455_MAG_00000007-scaffold_203; TARA_SAMEA6023455_MAG_00000007-scaffold_204; TARA_SAMEA6023455_MAG_00000007-scaffold_205; TARA_SAMEA6023455_MAG_00000007-scaffold_206; TARA_SAMEA6023455_MAG_00000007-scaffold_207; TARA_SAMEA6023455_MAG_00000007-scaffold_208; TARA_SAMEA6023455_MAG_00000007-scaffold_209; TARA_SAMEA6023455_MAG_00000007-scaffold_210; TARA_SAMEA6023455_MAG_00000007-scaffold_211; TARA_SAMEA6023455_MAG_00000007-scaffold_212; TARA_SAMEA6023455_MAG_00000007-scaffold_213; TARA_SAMEA6023455_MAG_00000007-scaffold_215; TARA_SAMEA6023455_MAG_00000007-scaffold_216; TARA_SAMEA6023455_MAG_00000007-scaffold_218; TARA_SAMEA6023455_MAG_00000007-scaffold_219; TARA_SAMEA6023455_MAG_00000007-scaffold_220; TARA_SAMEA6023455_MAG_00000007-scaffold_221; TARA_SAMEA6023455_MAG_00000007-scaffold_222; TARA_SAMEA6023455_MAG_00000007-scaffold_223; TARA_SAMEA6023455_MAG_00000007-scaffold_224; TARA_SAMEA6023455_MAG_00000007-scaffold_225; TARA_SAMEA6023455_MAG_00000007-scaffold_226; TARA_SAMEA6023455_MAG_00000007-scaffold_227; TARA_SAMEA6023455_MAG_00000007-scaffold_230; TARA_SAMEA6023455_MAG_00000007-scaffold_231; TARA_SAMEA6023455_MAG_00000007-scaffold_232; TARA_SAMEA6023455_MAG_00000007-scaffold_233; TARA_SAMEA6023455_MAG_00000007-scaffold_234; TARA_SAMEA6023455_MAG_00000007-scaffold_235; TARA_SAMEA6023455_MAG_00000007-scaffold_236; TARA_SAMEA6023455_MAG_00000007-scaffold_237; TARA_SAMEA6023455_MAG_00000007-scaffold_238; TARA_SAMEA6023455_MAG_00000007-scaffold_239; TARA_SAMEA6023455_MAG_00000007-scaffold_241; TARA_SAMEA6023455_MAG_00000007-scaffold_242; TARA_SAMEA6023455_MAG_00000007-scaffold_243; TARA_SAMEA6023455_MAG_00000007-scaffold_244; TARA_SAMEA6023455_MAG_00000007-scaffold_245; TARA_SAMEA6023455_MAG_00000007-scaffold_246; TARA_SAMEA6023455_MAG_00000007-scaffold_247; TARA_SAMEA6023455_MAG_00000007-scaffold_248; TARA_SAMEA6023455_MAG_00000007-scaffold_249; TARA_SAMEA6023455_MAG_00000007-scaffold_250; TARA_SAMEA6023455_MAG_00000007-scaffold_251; TARA_SAMEA6023455_MAG_00000007-scaffold_252; TARA_SAMEA6023455_MAG_00000007-scaffold_253; TARA_SAMEA6023455_MAG_00000007-scaffold_254; TARA_SAMEA6023455_MAG_00000007-scaffold_255; TARA_SAMEA6023455_MAG_00000007-scaffold_256; TARA_SAMEA6023455_MAG_00000007-scaffold_257; TARA_SAMEA6023455_MAG_00000007-scaffold_258; TARA_SAMEA6023455_MAG_00000007-scaffold_259; TARA_SAMEA6023455_MAG_00000007-scaffold_260; TARA_SAMEA6023455_MAG_00000007-scaffold_261; TARA_SAMEA6023455_MAG_00000007-scaffold_262; TARA_SAMEA6023455_MAG_00000007-scaffold_263; TARA_SAMEA6023455_MAG_00000007-scaffold_265; TARA_SAMEA6023455_MAG_00000007-scaffold_266; TARA_SAMEA6023455_MAG_00000007-scaffold_267; TARA_SAMEA6023455_MAG_00000007-scaffold_268; TARA_SAMEA6023455_MAG_00000007-scaffold_269; TARA_SAMEA6023455_MAG_00000007-scaffold_270; TARA_SAMEA6023455_MAG_00000007-scaffold_271; TARA_SAMEA6023455_MAG_00000007-scaffold_272; TARA_SAMEA6023455_MAG_00000007-scaffold_273; TARA_SAMEA6023455_MAG_00000007-scaffold_274; TARA_SAMEA6023455_MAG_00000007-scaffold_275; TARA_SAMEA6023455_MAG_00000007-scaffold_276; TARA_SAMEA6023455_MAG_00000007-scaffold_277; TARA_SAMEA6023455_MAG_00000007-scaffold_279; TARA_SAMEA6023455_MAG_00000007-scaffold_280; TARA_SAMEA6023455_MAG_00000007-scaffold_281; TARA_SAMEA6023455_MAG_00000007-scaffold_282; TARA_SAMEA6023455_MAG_00000007-scaffold_283; TARA_SAMEA6023455_MAG_00000007-scaffold_284; TARA_SAMEA6023455_MAG_00000007-scaffold_285; TARA_SAMEA6023455_MAG_00000007-scaffold_287; TARA_SAMEA6023455_MAG_00000007-scaffold_288; TARA_SAMEA6023455_MAG_00000007-scaffold_289; TARA_SAMEA6023455_MAG_00000007-scaffold_290; TARA_SAMEA6023455_MAG_00000007-scaffold_291; TARA_SAMEA6023455_MAG_00000007-scaffold_292; TARA_SAMEA6023455_MAG_00000007-scaffold_293; TARA_SAMEA6023455_MAG_00000007-scaffold_294; TARA_SAMEA6023455_MAG_00000007-scaffold_295

Compact view

TARA_SAMEA6023455_MAG_00000007-scaffold_1 - Region 1 - terpene

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Location: 10,466 - 31,557 nt. (total: 21,092 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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core biosynthetic genes

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TARA_SAMEA6023455_MAG_00000007-scaffold_3 - Region 1 - NRPS-like

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Location: 44,981 - 87,698 nt. (total: 42,718 nt) Show pHMM detection rules used

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

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core biosynthetic genes

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NRPS/PKS domains

NRPS/PKS modules

Detailed domain annotation

Selected features only

Show module domains

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 44980 - 87698:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6023455_MAG_00000007-scaffold_3_49

Search NORINE for peptide: strict or relaxed

AMP-binding (9..450): X

NRPSPredictor2: (unknown)

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: alaaaGaAVK
Nearest Stachelhaus code:: pip
Stachelhaus code match:: 40% (weak)

TARA_SAMEA6023455_MAG_00000007-scaffold_5 - Region 1 - NRPS,NRPS-like,T1PKS

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Location: 37,404 - 97,506 nt. (total: 60,103 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))
NRPS: cds(Condensation and (AMP-binding or A-OX))
NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

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core biosynthetic genes

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Gene details

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NRPS/PKS domains

NRPS/PKS modules

Detailed domain annotation

Selected features only

Show module domains

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 37403 - 97506:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X) + (X - ser) + (X - gly) + (val - X - X) + (glu - X - X) + (ohmal)

Direct lookup in NORINE database: strict or relaxed

For candidate cluster 2, location 37403 - 82104:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X - gly) + (val - X - X) + (glu - X - X) + (ohmal)

Direct lookup in NORINE database: strict or relaxed

For candidate cluster 3, location 42107 - 97506:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X) + (X - ser) + (X - gly) + (val - X - X) + (glu - X - X) + (ohmal)

Direct lookup in NORINE database: strict or relaxed

For candidate cluster 4, location 76164 - 97506:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X) + (X - ser) + (X - gly) + (val - X - X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6023455_MAG_00000007-scaffold_5_42

PKS_AT (529..824): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 62.5%; 2-Rhyd-Malonyl-CoA: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 98.4
Methoxymalonyl-CoA: 66.5
Methylmalonyl-CoA: 59.3
Ethylmalonyl-CoA: 52.7
inactive: 50.6
Propionyl-CoA: 31.7
2-Methylbutyryl-CoA: 19.8
Benzoyl-CoA: 19.2
Isobutyryl-CoA: 10.9
CHC-CoA: 10.8
trans-1,2-CPDA: 9.2
3-Methylbutyryl-CoA: 4.7
fatty_acid: 0.0
Acetyl-CoA: 0.0

TARA_SAMEA6023455_MAG_00000007-scaffold_5_43

Search NORINE for peptide: strict or relaxed

AMP-binding (501..906): glu

NRPSPredictor2: glu

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: glu, gln
Single AA prediction:: glu

Stachelhaus prediction details:

Stachelhaus sequence:: DTEdiGTiVK
Nearest Stachelhaus code:: lys-b
Stachelhaus code match:: 70% (weak)

AMP-binding (1583..1984): X

NRPSPredictor2: (unknown)

SVM prediction details:

NOTE: outside applicability domain

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DSaLiAEVwK
Nearest Stachelhaus code:: his
Stachelhaus code match:: 70% (weak)

AMP-binding (2646..3055): X

NRPSPredictor2: (unknown)

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DVenVGAIDK
Nearest Stachelhaus code:: arg
Stachelhaus code match:: 80% (moderate)

TARA_SAMEA6023455_MAG_00000007-scaffold_5_44

Search NORINE for peptide: strict or relaxed

AMP-binding (478..877): val

NRPSPredictor2: val

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: val

Stachelhaus prediction details:

Stachelhaus sequence:: DAfWLGGTFK
Nearest Stachelhaus code:: val
Stachelhaus code match:: 90% (moderate)

AMP-binding (1547..1947): X

NRPSPredictor2: (unknown)

SVM prediction details:

NOTE: outside applicability domain

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: val

Stachelhaus prediction details:

Stachelhaus sequence:: DSaLiAEVwK
Nearest Stachelhaus code:: his
Stachelhaus code match:: 70% (weak)

AMP-binding (2603..3011): X

NRPSPredictor2: hydrophobic-aliphatic

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DVeDVGvIiK
Nearest Stachelhaus code:: arg
Stachelhaus code match:: 70% (weak)

TARA_SAMEA6023455_MAG_00000007-scaffold_5_45

Search NORINE for peptide: strict or relaxed

AMP-binding (502..906): X

NRPSPredictor2: asp, asn, glu, gln, aad

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DTEdiGTiVK
Nearest Stachelhaus code:: lys-b
Stachelhaus code match:: 70% (weak)

AMP-binding (1581..1989): gly

NRPSPredictor2: gly

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: gly, ala
Single AA prediction:: gly

Stachelhaus prediction details:

Stachelhaus sequence:: DILQLGLVWK
Nearest Stachelhaus code:: gly
Stachelhaus code match:: 100% (strong)

TARA_SAMEA6023455_MAG_00000007-scaffold_5_46

Search NORINE for peptide: strict or relaxed

AMP-binding (506..910): X

NRPSPredictor2: asp, asn, glu, gln, aad

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DaEdiGTiVK
Nearest Stachelhaus code:: lys-b
Stachelhaus code match:: 60% (weak)

AMP-binding (1577..1976): ser

NRPSPredictor2: ser

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: ser, thr, dhpg, hpg
Small clusters prediction:: ser
Single AA prediction:: ser

Stachelhaus prediction details:

Stachelhaus sequence:: DVWHiSLIEK
Nearest Stachelhaus code:: ser
Stachelhaus code match:: 90% (moderate)

TARA_SAMEA6023455_MAG_00000007-scaffold_5_48

Search NORINE for peptide: strict or relaxed

AMP-binding (1..222): X

NRPSPredictor2: orn, lys, arg

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: orn, lys, arg
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DVenIGcItK
Nearest Stachelhaus code:: orn
Stachelhaus code match:: 60% (weak)

TARA_SAMEA6023455_MAG_00000007-scaffold_11 - Region 1 - lanthipeptide-class-iv

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Location: 1,395 - 24,121 nt. (total: 22,727 nt) Show pHMM detection rules used

lanthipeptide-class-iv: (cds(LANC_like and Pkinase) and not micKC)

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Lanthipeptides

Lanthipeptide predictions

Lanthipeptide(s) for TARA_SAMEA6023455_MAG_00000007-scaffold_11_9 - Putative Class III

TARA_SAMEA6023455_MAG_00000007-scaffold_11_10 leader / core peptide: MNSILSLQRLEGAADGAAC - DhbQNDhaDhbQDhaCQDhaHADhaCNDhaAGDhaHALDVLNPIDGGGGGVGVDhaPGGGGFG

Legend:

Dha: Didehydroalanine
Dhb: Didehydrobutyrine

Lanthipeptides

Core peptide predictions

TARA_SAMEA6023455_MAG_00000007-scaffold_11_10 - Class III

Cleavage pHMM score: -2.40

RODEO score: 0

Monoisotopic mass: 3978.8 Da

Molecular weight: 3981.1 Da

Number of bridges: 2

Alternative weights: (assuming N unmodified Ser/Thr residues); 3999.2 Da N = 1; 4017.2 Da N = 2; 4035.2 Da N = 3; 4053.2 Da N = 4; 4071.2 Da N = 5; 4089.3 Da N = 6; 4107.3 Da N = 7

TARA_SAMEA6023455_MAG_00000007-scaffold_14 - Region 1 - lassopeptide

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Location: 10,022 - 32,409 nt. (total: 22,388 nt) Show pHMM detection rules used

lassopeptide: (PF13471 and Asn_synthase or micJ25 or mcjC)

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Lasso peptides

Lasso peptide predictions

Lassopeptides - No core peptides found.

Lasso peptides

Core peptide predictions

No core peptides found.

TARA_SAMEA6023455_MAG_00000007-scaffold_15 - Region 1 - T1PKS,ladderane

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Location: 1,401 - 59,900 nt. (total: 58,500 nt) Show pHMM detection rules used

ladderane: ladderane
T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

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NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

TARA_SAMEA6023455_MAG_00000007-scaffold_27 - Region 1 - NRPS-like,RiPP-like

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Location: 1 - 24,351 nt. (total: 24,351 nt) Show pHMM detection rules used

Region on contig edge.

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))
RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

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NRPS/PKS domains

NRPS/PKS modules

Detailed domain annotation

Selected features only

Show module domains

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NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 24351:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (NMe-gly)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6023455_MAG_00000007-scaffold_27_1

Search NORINE for peptide: strict or relaxed

AMP-binding (197..590): gly

NRPSPredictor2: gly

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: gly, ala
Single AA prediction:: gly

Stachelhaus prediction details:

Stachelhaus sequence:: DILQLGMIWK
Nearest Stachelhaus code:: gly
Stachelhaus code match:: 100% (strong)

TARA_SAMEA6023455_MAG_00000007-scaffold_30 - Region 1 - NRPS,T1PKS

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Location: 1 - 63,708 nt. (total: 63,708 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))
T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

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NRPS/PKS domains

NRPS/PKS modules

Detailed domain annotation

Selected features only

Show module domains

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 63708:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (gly - D-X - X - X) + (ohmal) + (gln) + (ohmal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6023455_MAG_00000007-scaffold_30_3

PKS_AT (2031..2328): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 87.5%; inactive: 79.2%; 2-Rhyd-Malonyl-CoA: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 185.7
inactive: 96.8
Methoxymalonyl-CoA: 67.1
Methylmalonyl-CoA: 61.5
Propionyl-CoA: 36.4
Isobutyryl-CoA: 35.2
Ethylmalonyl-CoA: 34.6
Acetyl-CoA: 23.6
Benzoyl-CoA: 21.0
fatty_acid: 18.1
CHC-CoA: 16.7
2-Methylbutyryl-CoA: 16.5
3-Methylbutyryl-CoA: 8.8
trans-1,2-CPDA: 7.9

TARA_SAMEA6023455_MAG_00000007-scaffold_30_4

Search NORINE for peptide: strict or relaxed

AMP-binding (266..677): gln

NRPSPredictor2: gln

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: glu, gln
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAQDLGiVDK
Nearest Stachelhaus code:: gln
Stachelhaus code match:: 90% (moderate)

TARA_SAMEA6023455_MAG_00000007-scaffold_30_7

PKS_AT (535..840): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 79.2%; inactive: 66.7%; 2-Rhyd-Malonyl-CoA: 58.3%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 128.0
Methoxymalonyl-CoA: 59.6
inactive: 58.9
Methylmalonyl-CoA: 48.7
Propionyl-CoA: 40.0
2-Methylbutyryl-CoA: 22.2
Isobutyryl-CoA: 20.4
CHC-CoA: 13.8
3-Methylbutyryl-CoA: 13.8
Ethylmalonyl-CoA: 13.6
Benzoyl-CoA: 11.2
Acetyl-CoA: 11.0
trans-1,2-CPDA: 0.0
fatty_acid: 0.0

TARA_SAMEA6023455_MAG_00000007-scaffold_30_8

Search NORINE for peptide: strict or relaxed

CAL_domain (50..492): pk

minowa: NH2

Prediction, score:

NH2: 28.7
fatty_acid: 16.6
AHBA: 11.3
Acetyl-CoA: 1.7
shikimic_acid: 0.0

AMP-binding (1177..1577): gly

NRPSPredictor2: gly

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: gly, ala
Single AA prediction:: gly

Stachelhaus prediction details:

Stachelhaus sequence:: DILQLGLVWK
Nearest Stachelhaus code:: gly
Stachelhaus code match:: 100% (strong)

AMP-binding (2254..2659): X

NRPSPredictor2: hydrophilic

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DvEnagAVtK
Nearest Stachelhaus code:: val
Stachelhaus code match:: 50% (weak)

AMP-binding (3795..4198): X

NRPSPredictor2: (unknown)

SVM prediction details:

NOTE: outside applicability domain

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: pro, pip
Small clusters prediction:: pro
Single AA prediction:: pro

Stachelhaus prediction details:

Stachelhaus sequence:: DVQFIAdicK
Nearest Stachelhaus code:: pro
Stachelhaus code match:: 70% (weak)

AMP-binding (4865..5268): X

NRPSPredictor2: asp, asn, glu, gln, aad

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DqENiGaItK
Nearest Stachelhaus code:: orn
Stachelhaus code match:: 60% (weak)

AMP-binding (5930..6328): phe

NRPSPredictor2: phe

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: N/A
Small clusters prediction:: phe, trp
Single AA prediction:: phe

Stachelhaus prediction details:

Stachelhaus sequence:: eeWlLqLIaK
Nearest Stachelhaus code:: ser
Stachelhaus code match:: 50% (weak)

AMP-binding (7134..7534): ser

NRPSPredictor2: ser

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: ser, thr, dhpg, hpg
Small clusters prediction:: ser
Single AA prediction:: ser

Stachelhaus prediction details:

Stachelhaus sequence:: DVWHVSLVDK
Nearest Stachelhaus code:: ser
Stachelhaus code match:: 100% (strong)

TARA_SAMEA6023455_MAG_00000007-scaffold_32 - Region 1 - lanthipeptide-class-v

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Location: 27,234 - 60,082 nt. (total: 32,849 nt) Show pHMM detection rules used

Region on contig edge.

lanthipeptide-class-v: (APH and HopA1)

Legend:

core biosynthetic genes

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Lanthipeptides

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Lanthipeptides

Core peptide predictions

No core peptides found.

TARA_SAMEA6023455_MAG_00000007-scaffold_33 - Region 1 - NRPS

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Location: 1 - 38,246 nt. (total: 38,246 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

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NRPS/PKS domains

NRPS/PKS modules

Detailed domain annotation

Selected features only

Show module domains

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 38246:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (D-X - pro - X - ser)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6023455_MAG_00000007-scaffold_33_3

Search NORINE for peptide: strict or relaxed

CAL_domain (45..486): pk

minowa: NH2

Prediction, score:

NH2: 142.3
AHBA: 12.0
fatty_acid: 9.8
shikimic_acid: 0.0
Acetyl-CoA: -2.2

AMP-binding (1187..1604): X

NRPSPredictor2: hydrophobic-aliphatic

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DPenysVVhK
Nearest Stachelhaus code:: glu
Stachelhaus code match:: 50% (weak)

AMP-binding (2737..3142): pro

NRPSPredictor2: pro

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: pro, pip
Small clusters prediction:: pro
Single AA prediction:: pro

Stachelhaus prediction details:

Stachelhaus sequence:: DVQFvAqVVK
Nearest Stachelhaus code:: pro
Stachelhaus code match:: 80% (moderate)

AMP-binding (3819..4225): X

NRPSPredictor2: glu, gln

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: glu, gln
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAeHlGSVtK
Nearest Stachelhaus code:: glu
Stachelhaus code match:: 70% (weak)

AMP-binding (4915..5315): ser

NRPSPredictor2: ser

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: ser, thr, dhpg, hpg
Small clusters prediction:: ser
Single AA prediction:: ser

Stachelhaus prediction details:

Stachelhaus sequence:: DVWHvSLIEK
Nearest Stachelhaus code:: ser
Stachelhaus code match:: 90% (moderate)

TARA_SAMEA6023455_MAG_00000007-scaffold_34 - Region 1 - NRPS,T1PKS

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Location: 1 - 34,813 nt. (total: 34,813 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))
NRPS: cds(Condensation and (AMP-binding or A-OX))

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core biosynthetic genes

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NRPS/PKS domains

NRPS/PKS modules

Detailed domain annotation

Selected features only

Show module domains

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 34813:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X - X - X - ohmal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6023455_MAG_00000007-scaffold_34_1

Search NORINE for peptide: strict or relaxed

AMP-binding (527..931): X

NRPSPredictor2: val, leu, ile, abu, iva

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAFfVgAViK
Nearest Stachelhaus code:: phe
Stachelhaus code match:: 70% (weak)

AMP-binding (1628..2049): X

NRPSPredictor2: (unknown)

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: val

Stachelhaus prediction details:

Stachelhaus sequence:: DAFFLGgTFK
Nearest Stachelhaus code:: ile
Stachelhaus code match:: 90% (moderate)

AMP-binding (2732..3134): X

NRPSPredictor2: hydrophilic

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DVenVGAIgK
Nearest Stachelhaus code:: arg
Stachelhaus code match:: 70% (weak)

PKS_AT (3879..4173): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 62.5%; inactive: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 95.3
Methoxymalonyl-CoA: 58.5
Methylmalonyl-CoA: 52.7
inactive: 47.8
Isobutyryl-CoA: 28.8
Propionyl-CoA: 26.3
Ethylmalonyl-CoA: 20.5
fatty_acid: 17.0
Benzoyl-CoA: 14.6
trans-1,2-CPDA: 8.8
CHC-CoA: 0.0
Acetyl-CoA: 0.0
3-Methylbutyryl-CoA: 0.0
2-Methylbutyryl-CoA: 0.0

TARA_SAMEA6023455_MAG_00000007-scaffold_35 - Region 1 - NRPS,RiPP-like

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Location: 11,700 - 56,234 nt. (total: 44,535 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))
RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

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Select a gene to view the details available for it

NRPS/PKS domains

NRPS/PKS modules

Detailed domain annotation

Selected features only

Show module domains

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 11699 - 56234:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (val - val - pro - val - gln)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6023455_MAG_00000007-scaffold_35_32

Search NORINE for peptide: strict or relaxed

AMP-binding (42..440): val

NRPSPredictor2: val

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: val

Stachelhaus prediction details:

Stachelhaus sequence:: DVFWlGGvFK
Nearest Stachelhaus code:: val
Stachelhaus code match:: 80% (moderate)

AMP-binding (1109..1506): val

NRPSPredictor2: val

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: val

Stachelhaus prediction details:

Stachelhaus sequence:: DAfWLGGTFK
Nearest Stachelhaus code:: val
Stachelhaus code match:: 90% (moderate)

AMP-binding (2171..2574): pro

NRPSPredictor2: pro

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: pro, pip
Small clusters prediction:: pro
Single AA prediction:: pro

Stachelhaus prediction details:

Stachelhaus sequence:: DVQFlAHLAK
Nearest Stachelhaus code:: pro
Stachelhaus code match:: 90% (moderate)

AMP-binding (3243..3644): val

NRPSPredictor2: val

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: val

Stachelhaus prediction details:

Stachelhaus sequence:: DVFWfGGTFK
Nearest Stachelhaus code:: val
Stachelhaus code match:: 90% (moderate)

AMP-binding (4309..4707): gln

NRPSPredictor2: gln

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: glu, gln
Single AA prediction:: gln

Stachelhaus prediction details:

Stachelhaus sequence:: DAWQFGLIDK
Nearest Stachelhaus code:: gln
Stachelhaus code match:: 100% (strong)

TARA_SAMEA6023455_MAG_00000007-scaffold_38 - Region 1 - cyanobactin

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Location: 1 - 13,603 nt. (total: 13,603 nt) Show pHMM detection rules used

Region on contig edge.

cyanobactin: (cyanobactin_synth or TIGR03678)

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TARA_SAMEA6023455_MAG_00000007-scaffold_40 - Region 1 - lanthipeptide-class-i

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Location: 34,362 - 52,826 nt. (total: 18,465 nt) Show pHMM detection rules used

Region on contig edge.

lanthipeptide-class-i: ((LANC_like and (Lant_dehydr_N or Lant_dehydr_C)) and not (YcaO or TIGR03882))

Legend:

core biosynthetic genes

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Lanthipeptides

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Lanthipeptides

Core peptide predictions

No core peptides found.

TARA_SAMEA6023455_MAG_00000007-scaffold_41 - Region 1 - NRPS

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Location: 1 - 50,507 nt. (total: 50,507 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

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NRPS/PKS domains

NRPS/PKS modules

Detailed domain annotation

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NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 50507:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (gly) + (NMe-gln - NMe-gly)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6023455_MAG_00000007-scaffold_41_14

Search NORINE for peptide: strict or relaxed

AMP-binding (521..913): gly

NRPSPredictor2: gly

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: gly, ala
Single AA prediction:: gly

Stachelhaus prediction details:

Stachelhaus sequence:: DILQLGLVWK
Nearest Stachelhaus code:: gly
Stachelhaus code match:: 100% (strong)

TARA_SAMEA6023455_MAG_00000007-scaffold_41_15

Search NORINE for peptide: strict or relaxed

AMP-binding (541..941): gln

NRPSPredictor2: gln

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: glu, gln
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DptQFGLIDK
Nearest Stachelhaus code:: gln
Stachelhaus code match:: 80% (moderate)

AMP-binding (2048..2445): gly

NRPSPredictor2: gly

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: gly, ala
Single AA prediction:: gly

Stachelhaus prediction details:

Stachelhaus sequence:: DILQLGLVWK
Nearest Stachelhaus code:: gly
Stachelhaus code match:: 100% (strong)

TARA_SAMEA6023455_MAG_00000007-scaffold_42 - Region 1 - NRPS

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Location: 8,391 - 51,980 nt. (total: 43,590 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

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NRPS/PKS domains

NRPS/PKS modules

Detailed domain annotation

Selected features only

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Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 8390 - 51980:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (mal - X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6023455_MAG_00000007-scaffold_42_20

Search NORINE for peptide: strict or relaxed

AMP-binding (1362..1768): X

NRPSPredictor2: hydrophobic-aliphatic

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DArAlAqliK
Nearest Stachelhaus code:: phe
Stachelhaus code match:: 50% (weak)

TARA_SAMEA6023455_MAG_00000007-scaffold_46 - Region 1 - NRPS

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Location: 1 - 49,623 nt. (total: 49,623 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

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Select a gene to view the details available for it

NRPS/PKS domains

NRPS/PKS modules

Detailed domain annotation

Selected features only

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Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 49623:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (ser - X) + (asn - val) + (X) + (D-thr) + (asn - pro)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6023455_MAG_00000007-scaffold_46_1

Search NORINE for peptide: strict or relaxed

AMP-binding (783..1182): ser

NRPSPredictor2: ser

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: ser, thr, dhpg, hpg
Small clusters prediction:: ser
Single AA prediction:: ser

Stachelhaus prediction details:

Stachelhaus sequence:: DVWHVSLVDK
Nearest Stachelhaus code:: ser
Stachelhaus code match:: 100% (strong)

AMP-binding (1845..2252): X

NRPSPredictor2: hydrophobic-aliphatic

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAeDIGtVvK
Nearest Stachelhaus code:: glu
Stachelhaus code match:: 70% (weak)

TARA_SAMEA6023455_MAG_00000007-scaffold_46_3

Search NORINE for peptide: strict or relaxed

AMP-binding (461..861): asn

NRPSPredictor2: asn

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: asp, asn
Single AA prediction:: asn

Stachelhaus prediction details:

Stachelhaus sequence:: DLTKIGEVGK
Nearest Stachelhaus code:: asn
Stachelhaus code match:: 100% (strong)

AMP-binding (1538..1940): val

NRPSPredictor2: val

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: val

Stachelhaus prediction details:

Stachelhaus sequence:: DSaLiAEVwK
Nearest Stachelhaus code:: his
Stachelhaus code match:: 70% (weak)

TARA_SAMEA6023455_MAG_00000007-scaffold_46_5

Search NORINE for peptide: strict or relaxed

AMP-binding (503..904): X

NRPSPredictor2: (unknown)

SVM prediction details:

NOTE: outside applicability domain

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: val

Stachelhaus prediction details:

Stachelhaus sequence:: DSaLiAEVwK
Nearest Stachelhaus code:: his
Stachelhaus code match:: 70% (weak)

TARA_SAMEA6023455_MAG_00000007-scaffold_46_6

Search NORINE for peptide: strict or relaxed

AMP-binding (507..911): thr

NRPSPredictor2: thr

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: ser, thr, dhpg, hpg
Small clusters prediction:: thr
Single AA prediction:: thr

Stachelhaus prediction details:

Stachelhaus sequence:: DFWNVGMVHK
Nearest Stachelhaus code:: thr
Stachelhaus code match:: 100% (strong)

TARA_SAMEA6023455_MAG_00000007-scaffold_46_8

Search NORINE for peptide: strict or relaxed

AMP-binding (468..869): asn

NRPSPredictor2: asn

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: asp, asn
Single AA prediction:: asn

Stachelhaus prediction details:

Stachelhaus sequence:: DFTKvGEVGK
Nearest Stachelhaus code:: asn
Stachelhaus code match:: 90% (moderate)

AMP-binding (1537..1940): pro

NRPSPredictor2: pro

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: pro, pip
Small clusters prediction:: pro
Single AA prediction:: pro

Stachelhaus prediction details:

Stachelhaus sequence:: DVQFlAqVVK
Nearest Stachelhaus code:: pro
Stachelhaus code match:: 80% (moderate)

TARA_SAMEA6023455_MAG_00000007-scaffold_47 - Region 1 - NRPS

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Location: 1 - 49,000 nt. (total: 49,000 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

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Select a gene to view the details available for it

NRPS/PKS domains

NRPS/PKS modules

Detailed domain annotation

Selected features only

Show module domains

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Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 49000:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (D-ile - D-X - gly - val) + (asp - leu - D-NMe-phe)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6023455_MAG_00000007-scaffold_47_2

Search NORINE for peptide: strict or relaxed

AMP-binding (552..950): ile

NRPSPredictor2: ile

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAFFLGaTFK
Nearest Stachelhaus code:: ile
Stachelhaus code match:: 90% (moderate)

AMP-binding (2063..2477): X

NRPSPredictor2: asp, asn, glu, gln, aad

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DiWeItAdDK
Nearest Stachelhaus code:: arg
Stachelhaus code match:: 60% (weak)

AMP-binding (3596..4004): gly

NRPSPredictor2: gly

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: gly, ala
Single AA prediction:: gly

Stachelhaus prediction details:

Stachelhaus sequence:: DImQiGgIWK
Nearest Stachelhaus code:: gly
Stachelhaus code match:: 70% (weak)

AMP-binding (4661..5060): val

NRPSPredictor2: val

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: val

Stachelhaus prediction details:

Stachelhaus sequence:: DAfWLGGTFK
Nearest Stachelhaus code:: val
Stachelhaus code match:: 90% (moderate)

TARA_SAMEA6023455_MAG_00000007-scaffold_47_4

Search NORINE for peptide: strict or relaxed

AMP-binding (457..863): asp

NRPSPredictor2: asp

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: asp, asn
Single AA prediction:: asp

Stachelhaus prediction details:

Stachelhaus sequence:: DLTKVGHVGK
Nearest Stachelhaus code:: asp
Stachelhaus code match:: 100% (strong)

AMP-binding (1526..1921): leu

NRPSPredictor2: leu

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: leu

Stachelhaus prediction details:

Stachelhaus sequence:: DAWFLGNVVK
Nearest Stachelhaus code:: leu
Stachelhaus code match:: 100% (strong)

AMP-binding (2585..2974): phe

NRPSPredictor2: phe

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aromatic
Large clusters prediction:: phe, trp, phg, tyr, bht
Small clusters prediction:: phe, trp
Single AA prediction:: phe

Stachelhaus prediction details:

Stachelhaus sequence:: DAWTVAAVCK
Nearest Stachelhaus code:: phe
Stachelhaus code match:: 100% (strong)

TARA_SAMEA6023455_MAG_00000007-scaffold_48 - Region 1 - NRPS

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Location: 1 - 48,480 nt. (total: 48,480 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

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Select a gene to view the details available for it

NRPS/PKS domains

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Selected features only

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Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 48480:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (asn - X) + (X) + (D-asn) + (thr - pro) + (asp - gly)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6023455_MAG_00000007-scaffold_48_11

Search NORINE for peptide: strict or relaxed

AMP-binding (12..413): asp

NRPSPredictor2: asp

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DtKDLGlVDK
Nearest Stachelhaus code:: asp
Stachelhaus code match:: 80% (moderate)

AMP-binding (1089..1482): gly

NRPSPredictor2: gly

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: gly, ala
Single AA prediction:: gly

Stachelhaus prediction details:

Stachelhaus sequence:: DILQLGVIWK
Nearest Stachelhaus code:: gly
Stachelhaus code match:: 100% (strong)

TARA_SAMEA6023455_MAG_00000007-scaffold_48_13

Search NORINE for peptide: strict or relaxed

AMP-binding (130..536): thr

NRPSPredictor2: thr

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: ser, thr, dhpg, hpg
Small clusters prediction:: thr
Single AA prediction:: thr

Stachelhaus prediction details:

Stachelhaus sequence:: DFWSVGMVHK
Nearest Stachelhaus code:: thr
Stachelhaus code match:: 100% (strong)

AMP-binding (1209..1607): pro

NRPSPredictor2: pro

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: pro, pip
Small clusters prediction:: pro
Single AA prediction:: pro

Stachelhaus prediction details:

Stachelhaus sequence:: DVQFvAqVVK
Nearest Stachelhaus code:: pro
Stachelhaus code match:: 80% (moderate)

TARA_SAMEA6023455_MAG_00000007-scaffold_48_15

Search NORINE for peptide: strict or relaxed

AMP-binding (459..863): asn

NRPSPredictor2: asn

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: asp, asn
Single AA prediction:: asn

Stachelhaus prediction details:

Stachelhaus sequence:: DFTKIGEVGK
Nearest Stachelhaus code:: asn
Stachelhaus code match:: 100% (strong)

TARA_SAMEA6023455_MAG_00000007-scaffold_48_17

Search NORINE for peptide: strict or relaxed

AMP-binding (495..911): X

NRPSPredictor2: asp, asn, glu, gln, aad

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DVenIGaItK
Nearest Stachelhaus code:: orn
Stachelhaus code match:: 60% (weak)

TARA_SAMEA6023455_MAG_00000007-scaffold_48_19

Search NORINE for peptide: strict or relaxed

AMP-binding (0..351): asn

NRPSPredictor2: asn

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: asp, asn
Single AA prediction:: asn

Stachelhaus prediction details:

Stachelhaus sequence:: DLTKIGEVGK
Nearest Stachelhaus code:: asn
Stachelhaus code match:: 100% (strong)

AMP-binding (1029..1429): X

NRPSPredictor2: val, leu, ile, abu, iva

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DSaLiAEVwK
Nearest Stachelhaus code:: his
Stachelhaus code match:: 70% (weak)

TARA_SAMEA6023455_MAG_00000007-scaffold_49 - Region 1 - NRPS

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Location: 1 - 33,820 nt. (total: 33,820 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

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NRPS/PKS domains

NRPS/PKS modules

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NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 33820:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (thr - X - X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6023455_MAG_00000007-scaffold_49_3

Search NORINE for peptide: strict or relaxed

AMP-binding (550..960): thr

NRPSPredictor2: thr

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: ser, thr, dhpg, hpg
Small clusters prediction:: thr
Single AA prediction:: thr

Stachelhaus prediction details:

Stachelhaus sequence:: DFWNIGMVHK
Nearest Stachelhaus code:: thr
Stachelhaus code match:: 100% (strong)

AMP-binding (1671..2053): X

NRPSPredictor2: gly, ala, val, leu, ile, abu, iva

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAgfMGfVgK
Nearest Stachelhaus code:: leu
Stachelhaus code match:: 60% (weak)

AMP-binding (2728..3137): X

NRPSPredictor2: hydrophilic

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DvENcGtIaK
Nearest Stachelhaus code:: orn
Stachelhaus code match:: 60% (weak)

TARA_SAMEA6023455_MAG_00000007-scaffold_51 - Region 1 - T1PKS

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Location: 9,567 - 47,526 nt. (total: 37,960 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

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NRPS/PKS domains

NRPS/PKS modules

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NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 9566 - 47526:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (ohmal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6023455_MAG_00000007-scaffold_51_20

PKS_AT (548..864): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 83.3%; inactive: 70.8%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 144.7
inactive: 84.6
Methoxymalonyl-CoA: 71.8
Methylmalonyl-CoA: 66.0
Ethylmalonyl-CoA: 57.1
Isobutyryl-CoA: 35.5
Propionyl-CoA: 34.1
Benzoyl-CoA: 28.9
2-Methylbutyryl-CoA: 24.0
trans-1,2-CPDA: 22.7
fatty_acid: 20.2
CHC-CoA: 17.9
Acetyl-CoA: 17.8
3-Methylbutyryl-CoA: 11.7

TARA_SAMEA6023455_MAG_00000007-scaffold_54 - Region 1 - NRPS

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Location: 1 - 41,411 nt. (total: 41,411 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

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Predicted core structure(s)

For candidate cluster 1, location 0 - 41411:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X) + (NMe-ile - X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6023455_MAG_00000007-scaffold_54_10

Search NORINE for peptide: strict or relaxed

AMP-binding (475..892): X

NRPSPredictor2: asp, asn, glu, gln, aad

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAenIGAItK
Nearest Stachelhaus code:: leu
Stachelhaus code match:: 70% (weak)

TARA_SAMEA6023455_MAG_00000007-scaffold_54_11

Search NORINE for peptide: strict or relaxed

AMP-binding (495..900): ile

NRPSPredictor2: ile

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: ile

Stachelhaus prediction details:

Stachelhaus sequence:: DAFFLGaTFK
Nearest Stachelhaus code:: ile
Stachelhaus code match:: 90% (moderate)

AMP-binding (1989..2391): X

NRPSPredictor2: hydrophilic

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAmhvGGTaK
Nearest Stachelhaus code:: val
Stachelhaus code match:: 60% (weak)

TARA_SAMEA6023455_MAG_00000007-scaffold_60 - Region 1 - NRPS-like

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Location: 1 - 24,287 nt. (total: 24,287 nt) Show pHMM detection rules used

Region on contig edge.

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

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Predicted core structure(s)

For candidate cluster 1, location 0 - 24287:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (gln)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6023455_MAG_00000007-scaffold_60_2

Search NORINE for peptide: strict or relaxed

AMP-binding (51..454): gln

NRPSPredictor2: gln

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: glu, gln
Single AA prediction:: gln

Stachelhaus prediction details:

Stachelhaus sequence:: DiWQFGvIDK
Nearest Stachelhaus code:: gln
Stachelhaus code match:: 80% (moderate)

TARA_SAMEA6023455_MAG_00000007-scaffold_61 - Region 1 - phosphonate

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Location: 1 - 37,216 nt. (total: 37,216 nt) Show pHMM detection rules used

Region on contig edge.

phosphonate: phosphonates

Legend:

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TARA_SAMEA6023455_MAG_00000007-scaffold_62 - Region 1 - NRPS

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Location: 1 - 42,470 nt. (total: 42,470 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

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NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 42470:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (NMe-X) + (mal - D-ser) + (X - X) + (D-glu) + (NMe-ser - ser) + (asn - X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6023455_MAG_00000007-scaffold_62_1

Search NORINE for peptide: strict or relaxed

AMP-binding (541..954): X

NRPSPredictor2: hydrophobic-aromatic

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aromatic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DiWeItAdDK
Nearest Stachelhaus code:: arg
Stachelhaus code match:: 60% (weak)

TARA_SAMEA6023455_MAG_00000007-scaffold_62_2

Search NORINE for peptide: strict or relaxed

AMP-binding (1323..1732): ser

NRPSPredictor2: ser

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: ser, thr, dhpg, hpg
Small clusters prediction:: ser
Single AA prediction:: ser

Stachelhaus prediction details:

Stachelhaus sequence:: DVWHMSLVDK
Nearest Stachelhaus code:: ser
Stachelhaus code match:: 100% (strong)

TARA_SAMEA6023455_MAG_00000007-scaffold_62_3

Search NORINE for peptide: strict or relaxed

AMP-binding (467..876): X

NRPSPredictor2: asp, asn, glu, gln, aad

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAvDLGsVaK
Nearest Stachelhaus code:: gln
Stachelhaus code match:: 70% (weak)

AMP-binding (1546..1947): X

NRPSPredictor2: (unknown)

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAmHvGgLCK
Nearest Stachelhaus code:: hpg
Stachelhaus code match:: 70% (weak)

TARA_SAMEA6023455_MAG_00000007-scaffold_62_5

Search NORINE for peptide: strict or relaxed

AMP-binding (481..879): glu

NRPSPredictor2: glu

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DsKDLGVVDK
Nearest Stachelhaus code:: glu
Stachelhaus code match:: 90% (moderate)

TARA_SAMEA6023455_MAG_00000007-scaffold_62_6

Search NORINE for peptide: strict or relaxed

AMP-binding (475..872): ser

NRPSPredictor2: ser

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: ser, thr, dhpg, hpg
Small clusters prediction:: ser
Single AA prediction:: ser

Stachelhaus prediction details:

Stachelhaus sequence:: DVWHISLVDK
Nearest Stachelhaus code:: ser
Stachelhaus code match:: 100% (strong)

AMP-binding (1959..2357): ser

NRPSPredictor2: ser

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: ser, thr, dhpg, hpg
Small clusters prediction:: ser
Single AA prediction:: ser

Stachelhaus prediction details:

Stachelhaus sequence:: DVWHISLVDK
Nearest Stachelhaus code:: ser
Stachelhaus code match:: 100% (strong)

TARA_SAMEA6023455_MAG_00000007-scaffold_62_7

Search NORINE for peptide: strict or relaxed

AMP-binding (508..914): asn

NRPSPredictor2: asn

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: asp, asn
Single AA prediction:: asn

Stachelhaus prediction details:

Stachelhaus sequence:: DLTKVGEVGK
Nearest Stachelhaus code:: asn
Stachelhaus code match:: 100% (strong)

AMP-binding (1575..1984): X

NRPSPredictor2: glu, gln

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: N/A
Small clusters prediction:: glu, gln
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DgeHSGlVtK
Nearest Stachelhaus code:: glu
Stachelhaus code match:: 60% (weak)

TARA_SAMEA6023455_MAG_00000007-scaffold_66 - Region 1 - NRPS

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Location: 11,355 - 40,361 nt. (total: 29,007 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

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NRPS/PKS domains

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NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 11354 - 40361:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (mal) + (D-leu)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6023455_MAG_00000007-scaffold_66_19

Search NORINE for peptide: strict or relaxed

AMP-binding (271..668): leu

NRPSPredictor2: leu

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: leu

Stachelhaus prediction details:

Stachelhaus sequence:: DAlmaGLIaK
Nearest Stachelhaus code:: gln
Stachelhaus code match:: 60% (weak)

TARA_SAMEA6023455_MAG_00000007-scaffold_74 - Region 1 - NRPS

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Location: 1 - 39,014 nt. (total: 39,014 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

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NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 39014:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (thr - X - tyr)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6023455_MAG_00000007-scaffold_74_11

Search NORINE for peptide: strict or relaxed

CAL_domain (46..486): pk

minowa: NH2

Prediction, score:

NH2: 149.7
fatty_acid: 16.3
AHBA: 9.4
Acetyl-CoA: 4.9
shikimic_acid: 0.0

AMP-binding (1164..1595): thr

NRPSPredictor2: thr

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: ser, thr, dhpg, hpg
Small clusters prediction:: thr
Single AA prediction:: thr

Stachelhaus prediction details:

Stachelhaus sequence:: DFWNIGMVHK
Nearest Stachelhaus code:: thr
Stachelhaus code match:: 100% (strong)

AMP-binding (2252..2638): X

NRPSPredictor2: (unknown)

SVM prediction details:

NOTE: outside applicability domain

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: hlcwLGVgpK
Nearest Stachelhaus code:: gln
Stachelhaus code match:: 40% (weak)

AMP-binding (3223..3616): tyr

NRPSPredictor2: tyr

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aromatic
Large clusters prediction:: phe, trp, phg, tyr, bht
Small clusters prediction:: tyr, bht
Single AA prediction:: tyr

Stachelhaus prediction details:

Stachelhaus sequence:: DAmvlAAVCK
Nearest Stachelhaus code:: phe
Stachelhaus code match:: 70% (weak)

TARA_SAMEA6023455_MAG_00000007-scaffold_77 - Region 1 - NRPS

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Location: 1 - 38,029 nt. (total: 38,029 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

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NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 38029:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (val - thr - pro)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6023455_MAG_00000007-scaffold_77_11

Search NORINE for peptide: strict or relaxed

AMP-binding (545..944): val

NRPSPredictor2: val

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: val

Stachelhaus prediction details:

Stachelhaus sequence:: DgFfIGGTFK
Nearest Stachelhaus code:: val
Stachelhaus code match:: 80% (moderate)

AMP-binding (1640..2065): thr

NRPSPredictor2: thr

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: ser, thr, dhpg, hpg
Small clusters prediction:: thr
Single AA prediction:: thr

Stachelhaus prediction details:

Stachelhaus sequence:: DFWNIGMVHK
Nearest Stachelhaus code:: thr
Stachelhaus code match:: 100% (strong)

AMP-binding (2749..3170): pro

NRPSPredictor2: pro

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: pro, pip
Small clusters prediction:: pro
Single AA prediction:: pro

Stachelhaus prediction details:

Stachelhaus sequence:: DVQFIAHVVK
Nearest Stachelhaus code:: pro
Stachelhaus code match:: 100% (strong)

TARA_SAMEA6023455_MAG_00000007-scaffold_81 - Region 1 - NRPS,T1PKS

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Location: 1 - 37,136 nt. (total: 37,136 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))
T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

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NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 37136:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (ile - X - thr - X) + (ohmal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6023455_MAG_00000007-scaffold_81_12

Search NORINE for peptide: strict or relaxed

AMP-binding (559..962): ile

NRPSPredictor2: ile

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: ile

Stachelhaus prediction details:

Stachelhaus sequence:: DAFFLGVTFK
Nearest Stachelhaus code:: ile
Stachelhaus code match:: 100% (strong)

AMP-binding (1658..2060): X

NRPSPredictor2: orn, lys, arg

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: orn, lys, arg
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAehLGAItK
Nearest Stachelhaus code:: bht
Stachelhaus code match:: 70% (weak)

AMP-binding (2735..3149): thr

NRPSPredictor2: thr

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: ser, thr, dhpg, hpg
Small clusters prediction:: thr
Single AA prediction:: thr

Stachelhaus prediction details:

Stachelhaus sequence:: DFWSfGMVHK
Nearest Stachelhaus code:: thr
Stachelhaus code match:: 90% (moderate)

AMP-binding (3824..4251): X

NRPSPredictor2: val, leu, ile, abu, iva

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DisFaGaVlK
Nearest Stachelhaus code:: leu
Stachelhaus code match:: 50% (weak)

TARA_SAMEA6023455_MAG_00000007-scaffold_81_13

PKS_AT (520..801): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 79.2%; inactive: 66.7%; Propionyl-CoA: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 141.3
inactive: 95.1
Methoxymalonyl-CoA: 79.0
Methylmalonyl-CoA: 64.0
Isobutyryl-CoA: 41.8
Ethylmalonyl-CoA: 41.5
Propionyl-CoA: 32.0
CHC-CoA: 23.1
trans-1,2-CPDA: 21.4
2-Methylbutyryl-CoA: 20.6
Acetyl-CoA: 20.3
Benzoyl-CoA: 17.4
3-Methylbutyryl-CoA: 14.0
fatty_acid: 9.5

TARA_SAMEA6023455_MAG_00000007-scaffold_82 - Region 1 - terpene

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Location: 1 - 12,496 nt. (total: 12,496 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

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TARA_SAMEA6023455_MAG_00000007-scaffold_86 - Region 1 - cyanobactin

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Location: 1 - 17,482 nt. (total: 17,482 nt) Show pHMM detection rules used

Region on contig edge.

cyanobactin: (cyanobactin_synth or TIGR03678)

Legend:

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TARA_SAMEA6023455_MAG_00000007-scaffold_93 - Region 1 - NRPS-like

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Location: 4,553 - 32,869 nt. (total: 28,317 nt) Show pHMM detection rules used

Region on contig edge.

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

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NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 4552 - 32869:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6023455_MAG_00000007-scaffold_93_20

Search NORINE for peptide: strict or relaxed

AMP-binding (27..438): X

NRPSPredictor2: hydrophobic-aliphatic

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DFEdTgtiiK
Nearest Stachelhaus code:: val
Stachelhaus code match:: 50% (weak)

TARA_SAMEA6023455_MAG_00000007-scaffold_96 - Region 1 - NRPS,T1PKS

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Location: 1 - 32,304 nt. (total: 32,304 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))
T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

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NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 32304:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (val - X) + (mal - NMe-X - X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6023455_MAG_00000007-scaffold_96_11

Search NORINE for peptide: strict or relaxed

AMP-binding (561..963): val

NRPSPredictor2: val

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: val

Stachelhaus prediction details:

Stachelhaus sequence:: DALWLGGTFK
Nearest Stachelhaus code:: val
Stachelhaus code match:: 100% (strong)

AMP-binding (1662..2063): X

NRPSPredictor2: val, leu, ile, abu, iva

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAFlLGaTiK
Nearest Stachelhaus code:: ile
Stachelhaus code match:: 70% (weak)

TARA_SAMEA6023455_MAG_00000007-scaffold_96_12

Search NORINE for peptide: strict or relaxed

PKS_AT (531..834): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 75.0%; inactive: 62.5%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 147.3
inactive: 82.3
Methylmalonyl-CoA: 53.1
Methoxymalonyl-CoA: 48.5
Propionyl-CoA: 36.2
Ethylmalonyl-CoA: 23.2
fatty_acid: 17.2
Isobutyryl-CoA: 15.0
2-Methylbutyryl-CoA: 14.9
CHC-CoA: 11.8
Benzoyl-CoA: 11.7
Acetyl-CoA: 8.4
trans-1,2-CPDA: 0.0
3-Methylbutyryl-CoA: 0.0

AMP-binding (1495..1889): X

NRPSPredictor2: val, leu, ile, abu, iva

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAaFwGLVcK
Nearest Stachelhaus code:: leu
Stachelhaus code match:: 70% (weak)

AMP-binding (2967..3364): X

NRPSPredictor2: (unknown)

SVM prediction details:

NOTE: outside applicability domain

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: orn, lys, arg
Small clusters prediction:: N/A
Single AA prediction:: gln

Stachelhaus prediction details:

Stachelhaus sequence:: DAgDyGfiDK
Nearest Stachelhaus code:: gln
Stachelhaus code match:: 60% (weak)

TARA_SAMEA6023455_MAG_00000007-scaffold_101 - Region 1 - NRPS,T1PKS

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Location: 1 - 30,920 nt. (total: 30,920 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))
T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

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NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 30920:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (val - leu - ohmal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6023455_MAG_00000007-scaffold_101_6

Search NORINE for peptide: strict or relaxed

AMP-binding (36..435): val

NRPSPredictor2: val

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: val

Stachelhaus prediction details:

Stachelhaus sequence:: DAFWvGGTFK
Nearest Stachelhaus code:: val
Stachelhaus code match:: 90% (moderate)

AMP-binding (1220..1621): leu

NRPSPredictor2: leu

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: leu

Stachelhaus prediction details:

Stachelhaus sequence:: DAWFLGhVVK
Nearest Stachelhaus code:: leu
Stachelhaus code match:: 90% (moderate)

PKS_AT (2357..2658): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 75.0%; inactive: 66.7%; Methylmalonyl-CoA: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 129.3
Methoxymalonyl-CoA: 75.3
Methylmalonyl-CoA: 67.0
inactive: 64.3
Ethylmalonyl-CoA: 37.2
Isobutyryl-CoA: 35.5
Benzoyl-CoA: 32.3
Propionyl-CoA: 32.1
trans-1,2-CPDA: 25.4
Acetyl-CoA: 20.5
2-Methylbutyryl-CoA: 18.9
fatty_acid: 14.3
CHC-CoA: 9.9
3-Methylbutyryl-CoA: 0.0

TARA_SAMEA6023455_MAG_00000007-scaffold_118 - Region 1 - NRPS,T1PKS

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Location: 1 - 27,304 nt. (total: 27,304 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))
T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

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NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 27304:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (ohmal - leu - pro - mal - val)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6023455_MAG_00000007-scaffold_118_7

Search NORINE for peptide: strict or relaxed

PKS_AT (47..345): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 62.5%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 92.6
Methoxymalonyl-CoA: 70.2
Methylmalonyl-CoA: 67.2
Isobutyryl-CoA: 43.4
Benzoyl-CoA: 35.8
inactive: 34.4
Ethylmalonyl-CoA: 34.1
Propionyl-CoA: 33.8
2-Methylbutyryl-CoA: 30.0
fatty_acid: 25.9
CHC-CoA: 22.4
Acetyl-CoA: 21.4
3-Methylbutyryl-CoA: 15.7
trans-1,2-CPDA: 14.0

AMP-binding (1523..1917): leu

NRPSPredictor2: leu

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAwFFGLVcK
Nearest Stachelhaus code:: leu
Stachelhaus code match:: 80% (moderate)

AMP-binding (2600..3005): pro

NRPSPredictor2: pro

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: pro, pip
Small clusters prediction:: pro
Single AA prediction:: pro

Stachelhaus prediction details:

Stachelhaus sequence:: DVQFvAqVaK
Nearest Stachelhaus code:: pro
Stachelhaus code match:: 70% (weak)

PKS_AT (3743..4025): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 66.7%; inactive: 54.2%; Ethylmalonyl-CoA: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 121.6
inactive: 73.1
Methoxymalonyl-CoA: 48.4
Methylmalonyl-CoA: 42.5
Propionyl-CoA: 25.7
Ethylmalonyl-CoA: 16.0
Benzoyl-CoA: 15.0
2-Methylbutyryl-CoA: 12.5
Isobutyryl-CoA: 12.4
trans-1,2-CPDA: 0.0
fatty_acid: 0.0
CHC-CoA: 0.0
Acetyl-CoA: 0.0
3-Methylbutyryl-CoA: 0.0

AMP-binding (4700..5099): val

NRPSPredictor2: val

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DALWaGGiFK
Nearest Stachelhaus code:: val
Stachelhaus code match:: 80% (moderate)

TARA_SAMEA6023455_MAG_00000007-scaffold_131 - Region 1 - NRPS

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Location: 1 - 25,105 nt. (total: 25,105 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

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NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 25105:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X - glu)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6023455_MAG_00000007-scaffold_131_1

Search NORINE for peptide: strict or relaxed

AMP-binding (116..512): X

NRPSPredictor2: (unknown)

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAlDLGVVDK
Nearest Stachelhaus code:: gln
Stachelhaus code match:: 90% (moderate)

AMP-binding (1160..1555): glu

NRPSPredictor2: glu

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: orn, lys, arg
Small clusters prediction:: glu, gln
Single AA prediction:: glu

Stachelhaus prediction details:

Stachelhaus sequence:: DAQDfGVVnK
Nearest Stachelhaus code:: gln
Stachelhaus code match:: 80% (moderate)

TARA_SAMEA6023455_MAG_00000007-scaffold_134 - Region 1 - NRPS

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Location: 1 - 24,793 nt. (total: 24,793 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

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Predicted core structure(s)

For candidate cluster 1, location 0 - 24793:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (ser - ser)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6023455_MAG_00000007-scaffold_134_5

Search NORINE for peptide: strict or relaxed

CAL_domain (42..488): pk

minowa: fatty_acid

Prediction, score:

fatty_acid: 33.8
NH2: 33.7
AHBA: 13.0
shikimic_acid: 1.8
Acetyl-CoA: -0.0

AMP-binding (1168..1571): ser

NRPSPredictor2: ser

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: ser, thr, dhpg, hpg
Small clusters prediction:: ser
Single AA prediction:: ser

Stachelhaus prediction details:

Stachelhaus sequence:: DVWHVSLVDK
Nearest Stachelhaus code:: ser
Stachelhaus code match:: 100% (strong)

AMP-binding (2275..2674): ser

NRPSPredictor2: ser

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: ser, thr, dhpg, hpg
Small clusters prediction:: ser
Single AA prediction:: ser

Stachelhaus prediction details:

Stachelhaus sequence:: DVWHISLVDK
Nearest Stachelhaus code:: ser
Stachelhaus code match:: 100% (strong)

TARA_SAMEA6023455_MAG_00000007-scaffold_143 - Region 1 - NRPS-like,T1PKS

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Location: 1 - 23,222 nt. (total: 23,222 nt) Show pHMM detection rules used

Region on contig edge.

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))
T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

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TARA_SAMEA6023455_MAG_00000007-scaffold_145 - Region 1 - T3PKS

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Location: 1 - 22,843 nt. (total: 22,843 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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TARA_SAMEA6023455_MAG_00000007-scaffold_154 - Region 1 - NRPS,NRPS-like,T1PKS

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Location: 1 - 21,222 nt. (total: 21,222 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))
NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))
NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

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NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 21222:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (NMe-X - thr) + (ohmal) + (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6023455_MAG_00000007-scaffold_154_1

Search NORINE for peptide: strict or relaxed

AMP-binding (730..1158): X

NRPSPredictor2: asp, asn, glu, gln, aad

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DiWeMtadDK
Nearest Stachelhaus code:: ser
Stachelhaus code match:: 50% (weak)

AMP-binding (2229..2638): thr

NRPSPredictor2: thr

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: ser, thr, dhpg, hpg
Small clusters prediction:: thr
Single AA prediction:: thr

Stachelhaus prediction details:

Stachelhaus sequence:: DFWNIGMVHK
Nearest Stachelhaus code:: thr
Stachelhaus code match:: 100% (strong)

TARA_SAMEA6023455_MAG_00000007-scaffold_154_2

PKS_AT (534..823): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 87.5%; inactive: 79.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 182.8
inactive: 112.6
Methoxymalonyl-CoA: 80.6
Methylmalonyl-CoA: 62.0
Propionyl-CoA: 40.3
Ethylmalonyl-CoA: 37.6
2-Methylbutyryl-CoA: 37.1
CHC-CoA: 27.3
fatty_acid: 23.4
Benzoyl-CoA: 21.9
Isobutyryl-CoA: 21.0
Acetyl-CoA: 20.5
trans-1,2-CPDA: 16.4
3-Methylbutyryl-CoA: 12.7

TARA_SAMEA6023455_MAG_00000007-scaffold_154_4

Search NORINE for peptide: strict or relaxed

AMP-binding (8..414): X

NRPSPredictor2: hydrophobic-aliphatic

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DVrHLaLLaK
Nearest Stachelhaus code:: hpg
Stachelhaus code match:: 70% (weak)

TARA_SAMEA6023455_MAG_00000007-scaffold_155 - Region 1 - NRPS-like

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Location: 1 - 21,185 nt. (total: 21,185 nt) Show pHMM detection rules used

Region on contig edge.

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

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Predicted core structure(s)

For candidate cluster 1, location 0 - 21185:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6023455_MAG_00000007-scaffold_155_11

Search NORINE for peptide: strict or relaxed

AMP-binding (556..1003): X

NRPSPredictor2: (unknown)

SVM prediction details:

NOTE: outside applicability domain

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: aLclvGGPvK
Nearest Stachelhaus code:: ala
Stachelhaus code match:: 50% (weak)

TARA_SAMEA6023455_MAG_00000007-scaffold_168 - Region 1 - NRPS

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Location: 1 - 19,677 nt. (total: 19,677 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

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Predicted core structure(s)

For candidate cluster 1, location 0 - 19677:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6023455_MAG_00000007-scaffold_168_1

Search NORINE for peptide: strict or relaxed

AMP-binding (516..900): X

NRPSPredictor2: (unknown)

SVM prediction details:

NOTE: outside applicability domain

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: pro, pip
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: esWFLrfgVK
Nearest Stachelhaus code:: leu
Stachelhaus code match:: 50% (weak)

TARA_SAMEA6023455_MAG_00000007-scaffold_171 - Region 1 - NRPS

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Location: 1 - 18,992 nt. (total: 18,992 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

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TTA codons

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Predicted core structure(s)

For candidate cluster 1, location 0 - 18992:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (mal) + (asn - asn) + (D-X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6023455_MAG_00000007-scaffold_171_1

PKS_AT (0..285): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 58.3%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 115.5
inactive: 64.5
Methoxymalonyl-CoA: 59.5
Methylmalonyl-CoA: 43.9
Isobutyryl-CoA: 25.6
Ethylmalonyl-CoA: 23.4
Benzoyl-CoA: 22.6
Acetyl-CoA: 20.9
Propionyl-CoA: 20.4
CHC-CoA: 15.2
trans-1,2-CPDA: 12.5
fatty_acid: 12.2
2-Methylbutyryl-CoA: 9.6
3-Methylbutyryl-CoA: 9.4

TARA_SAMEA6023455_MAG_00000007-scaffold_171_3

Search NORINE for peptide: strict or relaxed

AMP-binding (458..854): asn

NRPSPredictor2: asn

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: asp, asn
Single AA prediction:: asn

Stachelhaus prediction details:

Stachelhaus sequence:: DLTKIGEVGK
Nearest Stachelhaus code:: asn
Stachelhaus code match:: 100% (strong)

AMP-binding (1528..1921): asn

NRPSPredictor2: asn

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: asp, asn
Single AA prediction:: asn

Stachelhaus prediction details:

Stachelhaus sequence:: DLTKIGEVGK
Nearest Stachelhaus code:: asn
Stachelhaus code match:: 100% (strong)

TARA_SAMEA6023455_MAG_00000007-scaffold_171_4

Search NORINE for peptide: strict or relaxed

AMP-binding (487..880): X

NRPSPredictor2: hydrophilic

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAwDIGVinK
Nearest Stachelhaus code:: glu
Stachelhaus code match:: 70% (weak)

TARA_SAMEA6023455_MAG_00000007-scaffold_176 - Region 1 - NRPS-like,T1PKS

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Location: 1 - 18,431 nt. (total: 18,431 nt) Show pHMM detection rules used

Region on contig edge.

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))
T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

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NRPS/PKS domains

NRPS/PKS modules

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NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 18431:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (val) + (ohmal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6023455_MAG_00000007-scaffold_176_1

Search NORINE for peptide: strict or relaxed

AMP-binding (1..395): val

NRPSPredictor2: val

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: val

Stachelhaus prediction details:

Stachelhaus sequence:: DAFWIGGTFK
Nearest Stachelhaus code:: val
Stachelhaus code match:: 100% (strong)

TARA_SAMEA6023455_MAG_00000007-scaffold_176_2

PKS_AT (540..838): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 87.5%; inactive: 70.8%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 153.8
inactive: 88.3
Methoxymalonyl-CoA: 78.0
Methylmalonyl-CoA: 61.6
Propionyl-CoA: 50.7
Ethylmalonyl-CoA: 35.7
Isobutyryl-CoA: 35.3
2-Methylbutyryl-CoA: 31.0
Acetyl-CoA: 27.3
Benzoyl-CoA: 17.4
CHC-CoA: 17.2
trans-1,2-CPDA: 16.2
fatty_acid: 14.0
3-Methylbutyryl-CoA: 13.6

TARA_SAMEA6023455_MAG_00000007-scaffold_178 - Region 1 - RiPP-like

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Location: 1 - 7,021 nt. (total: 7,021 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

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TARA_SAMEA6023455_MAG_00000007-scaffold_198 - Region 1 - T1PKS

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Location: 1 - 14,659 nt. (total: 14,659 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

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NRPS/PKS domains

NRPS/PKS modules

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NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 14659:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (ohmal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6023455_MAG_00000007-scaffold_198_5

PKS_AT (551..842): mal

ATSignature: Malonyl-CoA, inactive

Top 3 matches:: Malonyl-CoA: 91.7%; inactive: 91.7%; 2-Rhyd-Malonyl-CoA: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 189.8
inactive: 136.1
Methoxymalonyl-CoA: 72.7
Methylmalonyl-CoA: 65.3
Isobutyryl-CoA: 41.2
Propionyl-CoA: 40.4
Ethylmalonyl-CoA: 31.2
2-Methylbutyryl-CoA: 26.2
Benzoyl-CoA: 24.1
CHC-CoA: 17.7
Acetyl-CoA: 15.5
trans-1,2-CPDA: 15.1
fatty_acid: 14.7
3-Methylbutyryl-CoA: 7.9

TARA_SAMEA6023455_MAG_00000007-scaffold_214 - Region 1 - RiPP-like

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Location: 1 - 7,059 nt. (total: 7,059 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

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TARA_SAMEA6023455_MAG_00000007-scaffold_217 - Region 1 - NRPS-like

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Location: 1 - 12,554 nt. (total: 12,554 nt) Show pHMM detection rules used

Region on contig edge.

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

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Predicted core structure(s)

For candidate cluster 1, location 0 - 12554:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6023455_MAG_00000007-scaffold_217_3

Search NORINE for peptide: strict or relaxed

AMP-binding (94..528): X

NRPSPredictor2: (unknown)

SVM prediction details:

NOTE: outside applicability domain

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: ityYLGtMtK
Nearest Stachelhaus code:: leu
Stachelhaus code match:: 50% (weak)

TARA_SAMEA6023455_MAG_00000007-scaffold_217_7

Search NORINE for peptide: strict or relaxed

AMP-binding (29..416): X

NRPSPredictor2: (unknown)

SVM prediction details:

NOTE: outside applicability domain

Predicted physicochemical class:: N/A
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: gqgvaGGPvK
Nearest Stachelhaus code:: ala
Stachelhaus code match:: 40% (weak)

TARA_SAMEA6023455_MAG_00000007-scaffold_228 - Region 1 - NRPS

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Location: 1 - 11,557 nt. (total: 11,557 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

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NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 11557:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X - X - X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6023455_MAG_00000007-scaffold_228_1

Search NORINE for peptide: strict or relaxed

AMP-binding (512..912): X

NRPSPredictor2: (unknown)

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: val

Stachelhaus prediction details:

Stachelhaus sequence:: DAFFLGgTFK
Nearest Stachelhaus code:: ile
Stachelhaus code match:: 90% (moderate)

AMP-binding (1573..1975): X

NRPSPredictor2: (unknown)

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DVWHLgLIDK
Nearest Stachelhaus code:: ser
Stachelhaus code match:: 90% (moderate)

AMP-binding (2639..3035): X

NRPSPredictor2: val, leu, ile, abu, iva

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAfHFGStyK
Nearest Stachelhaus code:: glu
Stachelhaus code match:: 70% (weak)

TARA_SAMEA6023455_MAG_00000007-scaffold_229 - Region 1 - RiPP-like

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Location: 3,985 - 11,548 nt. (total: 7,564 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

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TARA_SAMEA6023455_MAG_00000007-scaffold_240 - Region 1 - NRPS

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Location: 1 - 10,487 nt. (total: 10,487 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

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NRPS/PKS domains

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NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 10487:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6023455_MAG_00000007-scaffold_240_1

Search NORINE for peptide: strict or relaxed

AMP-binding (472..881): X

NRPSPredictor2: hydrophobic-aliphatic

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DLedIGtVvK
Nearest Stachelhaus code:: asn
Stachelhaus code match:: 60% (weak)

TARA_SAMEA6023455_MAG_00000007-scaffold_264 - Region 1 - RiPP-like

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Location: 1 - 7,339 nt. (total: 7,339 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

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TARA_SAMEA6023455_MAG_00000007-scaffold_278 - Region 1 - NRPS

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Location: 1 - 6,790 nt. (total: 6,790 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

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NRPS/PKS domains

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NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 6790:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (thr)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6023455_MAG_00000007-scaffold_278_1

Search NORINE for peptide: strict or relaxed

AMP-binding (1027..1428): thr

NRPSPredictor2: thr

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: ser, thr, dhpg, hpg
Small clusters prediction:: thr
Single AA prediction:: thr

Stachelhaus prediction details:

Stachelhaus sequence:: DFWNIGMVHK
Nearest Stachelhaus code:: thr
Stachelhaus code match:: 100% (strong)

TARA_SAMEA6023455_MAG_00000007-scaffold_286 - Region 1 - NRPS-like

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Location: 1 - 5,672 nt. (total: 5,672 nt) Show pHMM detection rules used

Region on contig edge.

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

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