TARA_SAMEA6015412_MAG_00000003 - 12 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

TARA_SAMEA6015412_MAG_00000003-scaffold_3

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	NRPS-like,T1PKS	1	34,523

TARA_SAMEA6015412_MAG_00000003-scaffold_4

Region	Type	From	To	Most similar known cluster		Similarity
Region 4.1	terpene	15,893	35,077

TARA_SAMEA6015412_MAG_00000003-scaffold_5

Region	Type	From	To	Most similar known cluster		Similarity
Region 5.1	CDPS	1	11,443

TARA_SAMEA6015412_MAG_00000003-scaffold_17

Region	Type	From	To	Most similar known cluster		Similarity
Region 17.1	hglE-KS	1	27,098

TARA_SAMEA6015412_MAG_00000003-scaffold_36

Region	Type	From	To	Most similar known cluster		Similarity
Region 36.1	proteusin	2,247	22,727

TARA_SAMEA6015412_MAG_00000003-scaffold_50

Region	Type	From	To	Most similar known cluster		Similarity
Region 50.1	siderophore	3,283	20,181

TARA_SAMEA6015412_MAG_00000003-scaffold_72

Region	Type	From	To	Most similar known cluster		Similarity
Region 72.1	terpene	1,239	18,055

TARA_SAMEA6015412_MAG_00000003-scaffold_107

Region	Type	From	To	Most similar known cluster		Similarity
Region 107.1	lanthipeptide-class-ii	1	14,755

TARA_SAMEA6015412_MAG_00000003-scaffold_182

Region	Type	From	To	Most similar known cluster		Similarity
Region 182.1	T3PKS	1	9,454

TARA_SAMEA6015412_MAG_00000003-scaffold_186

Region	Type	From	To	Most similar known cluster		Similarity
Region 186.1	proteusin	1	9,321

TARA_SAMEA6015412_MAG_00000003-scaffold_222

Region	Type	From	To	Most similar known cluster		Similarity
Region 222.1	NRPS	1	7,515

TARA_SAMEA6015412_MAG_00000003-scaffold_294

Region	Type	From	To	Most similar known cluster		Similarity
Region 294.1	terpene	1	5,227

Region	Type	From	To	Similarity
Region 3.1	NRPS-like,T1PKS	1	34,523
Region 4.1	terpene	15,893	35,077
Region 5.1	CDPS	1	11,443
Region 17.1	hglE-KS	1	27,098
Region 36.1	proteusin	2,247	22,727
Region 50.1	siderophore	3,283	20,181
Region 72.1	terpene	1,239	18,055
Region 107.1	lanthipeptide-class-ii	1	14,755
Region 182.1	T3PKS	1	9,454
Region 186.1	proteusin	1	9,321
Region 222.1	NRPS	1	7,515
Region 294.1	terpene	1	5,227

No secondary metabolite regions were found in these records:: TARA_SAMEA6015412_MAG_00000003-scaffold_1; TARA_SAMEA6015412_MAG_00000003-scaffold_2; TARA_SAMEA6015412_MAG_00000003-scaffold_6; TARA_SAMEA6015412_MAG_00000003-scaffold_7; TARA_SAMEA6015412_MAG_00000003-scaffold_8; TARA_SAMEA6015412_MAG_00000003-scaffold_9; TARA_SAMEA6015412_MAG_00000003-scaffold_10; TARA_SAMEA6015412_MAG_00000003-scaffold_11; TARA_SAMEA6015412_MAG_00000003-scaffold_12; TARA_SAMEA6015412_MAG_00000003-scaffold_13; TARA_SAMEA6015412_MAG_00000003-scaffold_14; TARA_SAMEA6015412_MAG_00000003-scaffold_15; TARA_SAMEA6015412_MAG_00000003-scaffold_16; TARA_SAMEA6015412_MAG_00000003-scaffold_18; TARA_SAMEA6015412_MAG_00000003-scaffold_19; TARA_SAMEA6015412_MAG_00000003-scaffold_20; TARA_SAMEA6015412_MAG_00000003-scaffold_21; TARA_SAMEA6015412_MAG_00000003-scaffold_22; TARA_SAMEA6015412_MAG_00000003-scaffold_23; TARA_SAMEA6015412_MAG_00000003-scaffold_24; TARA_SAMEA6015412_MAG_00000003-scaffold_25; TARA_SAMEA6015412_MAG_00000003-scaffold_26; TARA_SAMEA6015412_MAG_00000003-scaffold_27; TARA_SAMEA6015412_MAG_00000003-scaffold_28; TARA_SAMEA6015412_MAG_00000003-scaffold_29; TARA_SAMEA6015412_MAG_00000003-scaffold_30; TARA_SAMEA6015412_MAG_00000003-scaffold_31; TARA_SAMEA6015412_MAG_00000003-scaffold_32; TARA_SAMEA6015412_MAG_00000003-scaffold_33; TARA_SAMEA6015412_MAG_00000003-scaffold_34; TARA_SAMEA6015412_MAG_00000003-scaffold_35; TARA_SAMEA6015412_MAG_00000003-scaffold_37; TARA_SAMEA6015412_MAG_00000003-scaffold_38; TARA_SAMEA6015412_MAG_00000003-scaffold_39; TARA_SAMEA6015412_MAG_00000003-scaffold_40; TARA_SAMEA6015412_MAG_00000003-scaffold_41; TARA_SAMEA6015412_MAG_00000003-scaffold_42; TARA_SAMEA6015412_MAG_00000003-scaffold_43; TARA_SAMEA6015412_MAG_00000003-scaffold_44; TARA_SAMEA6015412_MAG_00000003-scaffold_45; TARA_SAMEA6015412_MAG_00000003-scaffold_46; TARA_SAMEA6015412_MAG_00000003-scaffold_47; TARA_SAMEA6015412_MAG_00000003-scaffold_48; TARA_SAMEA6015412_MAG_00000003-scaffold_49; TARA_SAMEA6015412_MAG_00000003-scaffold_51; TARA_SAMEA6015412_MAG_00000003-scaffold_52; TARA_SAMEA6015412_MAG_00000003-scaffold_53; TARA_SAMEA6015412_MAG_00000003-scaffold_54; TARA_SAMEA6015412_MAG_00000003-scaffold_55; TARA_SAMEA6015412_MAG_00000003-scaffold_56; TARA_SAMEA6015412_MAG_00000003-scaffold_57; TARA_SAMEA6015412_MAG_00000003-scaffold_58; TARA_SAMEA6015412_MAG_00000003-scaffold_59; TARA_SAMEA6015412_MAG_00000003-scaffold_60; TARA_SAMEA6015412_MAG_00000003-scaffold_61; TARA_SAMEA6015412_MAG_00000003-scaffold_62; TARA_SAMEA6015412_MAG_00000003-scaffold_63; TARA_SAMEA6015412_MAG_00000003-scaffold_64; TARA_SAMEA6015412_MAG_00000003-scaffold_65; TARA_SAMEA6015412_MAG_00000003-scaffold_66; TARA_SAMEA6015412_MAG_00000003-scaffold_67; TARA_SAMEA6015412_MAG_00000003-scaffold_68; TARA_SAMEA6015412_MAG_00000003-scaffold_69; TARA_SAMEA6015412_MAG_00000003-scaffold_70; TARA_SAMEA6015412_MAG_00000003-scaffold_71; TARA_SAMEA6015412_MAG_00000003-scaffold_73; TARA_SAMEA6015412_MAG_00000003-scaffold_74; TARA_SAMEA6015412_MAG_00000003-scaffold_75; TARA_SAMEA6015412_MAG_00000003-scaffold_76; TARA_SAMEA6015412_MAG_00000003-scaffold_77; TARA_SAMEA6015412_MAG_00000003-scaffold_78; TARA_SAMEA6015412_MAG_00000003-scaffold_79; TARA_SAMEA6015412_MAG_00000003-scaffold_80; TARA_SAMEA6015412_MAG_00000003-scaffold_81; TARA_SAMEA6015412_MAG_00000003-scaffold_82; TARA_SAMEA6015412_MAG_00000003-scaffold_83; TARA_SAMEA6015412_MAG_00000003-scaffold_84; TARA_SAMEA6015412_MAG_00000003-scaffold_85; TARA_SAMEA6015412_MAG_00000003-scaffold_86; TARA_SAMEA6015412_MAG_00000003-scaffold_87; TARA_SAMEA6015412_MAG_00000003-scaffold_88; TARA_SAMEA6015412_MAG_00000003-scaffold_89; TARA_SAMEA6015412_MAG_00000003-scaffold_90; TARA_SAMEA6015412_MAG_00000003-scaffold_91; TARA_SAMEA6015412_MAG_00000003-scaffold_92; TARA_SAMEA6015412_MAG_00000003-scaffold_93; TARA_SAMEA6015412_MAG_00000003-scaffold_94; TARA_SAMEA6015412_MAG_00000003-scaffold_95; TARA_SAMEA6015412_MAG_00000003-scaffold_96; TARA_SAMEA6015412_MAG_00000003-scaffold_97; TARA_SAMEA6015412_MAG_00000003-scaffold_98; TARA_SAMEA6015412_MAG_00000003-scaffold_99; TARA_SAMEA6015412_MAG_00000003-scaffold_100; TARA_SAMEA6015412_MAG_00000003-scaffold_101; TARA_SAMEA6015412_MAG_00000003-scaffold_102; TARA_SAMEA6015412_MAG_00000003-scaffold_103; TARA_SAMEA6015412_MAG_00000003-scaffold_104; TARA_SAMEA6015412_MAG_00000003-scaffold_105; TARA_SAMEA6015412_MAG_00000003-scaffold_106; TARA_SAMEA6015412_MAG_00000003-scaffold_108; TARA_SAMEA6015412_MAG_00000003-scaffold_109; TARA_SAMEA6015412_MAG_00000003-scaffold_110; TARA_SAMEA6015412_MAG_00000003-scaffold_111; TARA_SAMEA6015412_MAG_00000003-scaffold_112; TARA_SAMEA6015412_MAG_00000003-scaffold_113; TARA_SAMEA6015412_MAG_00000003-scaffold_114; TARA_SAMEA6015412_MAG_00000003-scaffold_115; TARA_SAMEA6015412_MAG_00000003-scaffold_116; TARA_SAMEA6015412_MAG_00000003-scaffold_117; TARA_SAMEA6015412_MAG_00000003-scaffold_118; TARA_SAMEA6015412_MAG_00000003-scaffold_119; TARA_SAMEA6015412_MAG_00000003-scaffold_120; TARA_SAMEA6015412_MAG_00000003-scaffold_121; TARA_SAMEA6015412_MAG_00000003-scaffold_122; TARA_SAMEA6015412_MAG_00000003-scaffold_123; TARA_SAMEA6015412_MAG_00000003-scaffold_124; TARA_SAMEA6015412_MAG_00000003-scaffold_125; TARA_SAMEA6015412_MAG_00000003-scaffold_126; TARA_SAMEA6015412_MAG_00000003-scaffold_127; TARA_SAMEA6015412_MAG_00000003-scaffold_128; TARA_SAMEA6015412_MAG_00000003-scaffold_129; TARA_SAMEA6015412_MAG_00000003-scaffold_130; TARA_SAMEA6015412_MAG_00000003-scaffold_131; TARA_SAMEA6015412_MAG_00000003-scaffold_132; TARA_SAMEA6015412_MAG_00000003-scaffold_133; TARA_SAMEA6015412_MAG_00000003-scaffold_134; TARA_SAMEA6015412_MAG_00000003-scaffold_135; TARA_SAMEA6015412_MAG_00000003-scaffold_136; TARA_SAMEA6015412_MAG_00000003-scaffold_137; TARA_SAMEA6015412_MAG_00000003-scaffold_138; TARA_SAMEA6015412_MAG_00000003-scaffold_139; TARA_SAMEA6015412_MAG_00000003-scaffold_140; TARA_SAMEA6015412_MAG_00000003-scaffold_141; TARA_SAMEA6015412_MAG_00000003-scaffold_142; TARA_SAMEA6015412_MAG_00000003-scaffold_143; TARA_SAMEA6015412_MAG_00000003-scaffold_144; TARA_SAMEA6015412_MAG_00000003-scaffold_145; TARA_SAMEA6015412_MAG_00000003-scaffold_146; TARA_SAMEA6015412_MAG_00000003-scaffold_147; TARA_SAMEA6015412_MAG_00000003-scaffold_148; TARA_SAMEA6015412_MAG_00000003-scaffold_149; TARA_SAMEA6015412_MAG_00000003-scaffold_150; TARA_SAMEA6015412_MAG_00000003-scaffold_151; TARA_SAMEA6015412_MAG_00000003-scaffold_152; TARA_SAMEA6015412_MAG_00000003-scaffold_153; TARA_SAMEA6015412_MAG_00000003-scaffold_154; TARA_SAMEA6015412_MAG_00000003-scaffold_155; TARA_SAMEA6015412_MAG_00000003-scaffold_156; TARA_SAMEA6015412_MAG_00000003-scaffold_157; TARA_SAMEA6015412_MAG_00000003-scaffold_158; TARA_SAMEA6015412_MAG_00000003-scaffold_159; TARA_SAMEA6015412_MAG_00000003-scaffold_160; TARA_SAMEA6015412_MAG_00000003-scaffold_161; TARA_SAMEA6015412_MAG_00000003-scaffold_162; TARA_SAMEA6015412_MAG_00000003-scaffold_163; TARA_SAMEA6015412_MAG_00000003-scaffold_164; TARA_SAMEA6015412_MAG_00000003-scaffold_165; TARA_SAMEA6015412_MAG_00000003-scaffold_166; TARA_SAMEA6015412_MAG_00000003-scaffold_167; TARA_SAMEA6015412_MAG_00000003-scaffold_168; TARA_SAMEA6015412_MAG_00000003-scaffold_169; TARA_SAMEA6015412_MAG_00000003-scaffold_170; TARA_SAMEA6015412_MAG_00000003-scaffold_171; TARA_SAMEA6015412_MAG_00000003-scaffold_172; TARA_SAMEA6015412_MAG_00000003-scaffold_173; TARA_SAMEA6015412_MAG_00000003-scaffold_174; TARA_SAMEA6015412_MAG_00000003-scaffold_175; TARA_SAMEA6015412_MAG_00000003-scaffold_176; TARA_SAMEA6015412_MAG_00000003-scaffold_177; TARA_SAMEA6015412_MAG_00000003-scaffold_178; TARA_SAMEA6015412_MAG_00000003-scaffold_179; TARA_SAMEA6015412_MAG_00000003-scaffold_180; TARA_SAMEA6015412_MAG_00000003-scaffold_181; TARA_SAMEA6015412_MAG_00000003-scaffold_183; TARA_SAMEA6015412_MAG_00000003-scaffold_184; TARA_SAMEA6015412_MAG_00000003-scaffold_185; TARA_SAMEA6015412_MAG_00000003-scaffold_187; TARA_SAMEA6015412_MAG_00000003-scaffold_188; TARA_SAMEA6015412_MAG_00000003-scaffold_189; TARA_SAMEA6015412_MAG_00000003-scaffold_190; TARA_SAMEA6015412_MAG_00000003-scaffold_191; TARA_SAMEA6015412_MAG_00000003-scaffold_192; TARA_SAMEA6015412_MAG_00000003-scaffold_193; TARA_SAMEA6015412_MAG_00000003-scaffold_194; TARA_SAMEA6015412_MAG_00000003-scaffold_195; TARA_SAMEA6015412_MAG_00000003-scaffold_196; TARA_SAMEA6015412_MAG_00000003-scaffold_197; TARA_SAMEA6015412_MAG_00000003-scaffold_198; TARA_SAMEA6015412_MAG_00000003-scaffold_199; TARA_SAMEA6015412_MAG_00000003-scaffold_200; TARA_SAMEA6015412_MAG_00000003-scaffold_201; TARA_SAMEA6015412_MAG_00000003-scaffold_202; TARA_SAMEA6015412_MAG_00000003-scaffold_203; TARA_SAMEA6015412_MAG_00000003-scaffold_204; TARA_SAMEA6015412_MAG_00000003-scaffold_205; TARA_SAMEA6015412_MAG_00000003-scaffold_206; TARA_SAMEA6015412_MAG_00000003-scaffold_207; TARA_SAMEA6015412_MAG_00000003-scaffold_208; TARA_SAMEA6015412_MAG_00000003-scaffold_209; TARA_SAMEA6015412_MAG_00000003-scaffold_210; TARA_SAMEA6015412_MAG_00000003-scaffold_211; TARA_SAMEA6015412_MAG_00000003-scaffold_212; TARA_SAMEA6015412_MAG_00000003-scaffold_213; TARA_SAMEA6015412_MAG_00000003-scaffold_214; TARA_SAMEA6015412_MAG_00000003-scaffold_215; TARA_SAMEA6015412_MAG_00000003-scaffold_216; TARA_SAMEA6015412_MAG_00000003-scaffold_217; TARA_SAMEA6015412_MAG_00000003-scaffold_218; TARA_SAMEA6015412_MAG_00000003-scaffold_219; TARA_SAMEA6015412_MAG_00000003-scaffold_220; TARA_SAMEA6015412_MAG_00000003-scaffold_221; TARA_SAMEA6015412_MAG_00000003-scaffold_223; TARA_SAMEA6015412_MAG_00000003-scaffold_224; TARA_SAMEA6015412_MAG_00000003-scaffold_225; TARA_SAMEA6015412_MAG_00000003-scaffold_226; TARA_SAMEA6015412_MAG_00000003-scaffold_227; TARA_SAMEA6015412_MAG_00000003-scaffold_228; TARA_SAMEA6015412_MAG_00000003-scaffold_229; TARA_SAMEA6015412_MAG_00000003-scaffold_230; TARA_SAMEA6015412_MAG_00000003-scaffold_231; TARA_SAMEA6015412_MAG_00000003-scaffold_232; TARA_SAMEA6015412_MAG_00000003-scaffold_233; TARA_SAMEA6015412_MAG_00000003-scaffold_234; TARA_SAMEA6015412_MAG_00000003-scaffold_235; TARA_SAMEA6015412_MAG_00000003-scaffold_236; TARA_SAMEA6015412_MAG_00000003-scaffold_237; TARA_SAMEA6015412_MAG_00000003-scaffold_238; TARA_SAMEA6015412_MAG_00000003-scaffold_239; TARA_SAMEA6015412_MAG_00000003-scaffold_240; TARA_SAMEA6015412_MAG_00000003-scaffold_241; TARA_SAMEA6015412_MAG_00000003-scaffold_242; TARA_SAMEA6015412_MAG_00000003-scaffold_243; TARA_SAMEA6015412_MAG_00000003-scaffold_244; TARA_SAMEA6015412_MAG_00000003-scaffold_245; TARA_SAMEA6015412_MAG_00000003-scaffold_246; TARA_SAMEA6015412_MAG_00000003-scaffold_247; TARA_SAMEA6015412_MAG_00000003-scaffold_248; TARA_SAMEA6015412_MAG_00000003-scaffold_249; TARA_SAMEA6015412_MAG_00000003-scaffold_250; TARA_SAMEA6015412_MAG_00000003-scaffold_251; TARA_SAMEA6015412_MAG_00000003-scaffold_252; TARA_SAMEA6015412_MAG_00000003-scaffold_253; TARA_SAMEA6015412_MAG_00000003-scaffold_254; TARA_SAMEA6015412_MAG_00000003-scaffold_255; TARA_SAMEA6015412_MAG_00000003-scaffold_256; TARA_SAMEA6015412_MAG_00000003-scaffold_257; TARA_SAMEA6015412_MAG_00000003-scaffold_258; TARA_SAMEA6015412_MAG_00000003-scaffold_259; TARA_SAMEA6015412_MAG_00000003-scaffold_260; TARA_SAMEA6015412_MAG_00000003-scaffold_261; TARA_SAMEA6015412_MAG_00000003-scaffold_262; TARA_SAMEA6015412_MAG_00000003-scaffold_263; TARA_SAMEA6015412_MAG_00000003-scaffold_264; TARA_SAMEA6015412_MAG_00000003-scaffold_265; TARA_SAMEA6015412_MAG_00000003-scaffold_266; TARA_SAMEA6015412_MAG_00000003-scaffold_267; TARA_SAMEA6015412_MAG_00000003-scaffold_268; TARA_SAMEA6015412_MAG_00000003-scaffold_269; TARA_SAMEA6015412_MAG_00000003-scaffold_270; TARA_SAMEA6015412_MAG_00000003-scaffold_271; TARA_SAMEA6015412_MAG_00000003-scaffold_272; TARA_SAMEA6015412_MAG_00000003-scaffold_273; TARA_SAMEA6015412_MAG_00000003-scaffold_274; TARA_SAMEA6015412_MAG_00000003-scaffold_275; TARA_SAMEA6015412_MAG_00000003-scaffold_276; TARA_SAMEA6015412_MAG_00000003-scaffold_277; TARA_SAMEA6015412_MAG_00000003-scaffold_278; TARA_SAMEA6015412_MAG_00000003-scaffold_279; TARA_SAMEA6015412_MAG_00000003-scaffold_280; TARA_SAMEA6015412_MAG_00000003-scaffold_281; TARA_SAMEA6015412_MAG_00000003-scaffold_282; TARA_SAMEA6015412_MAG_00000003-scaffold_283; TARA_SAMEA6015412_MAG_00000003-scaffold_284; TARA_SAMEA6015412_MAG_00000003-scaffold_285; TARA_SAMEA6015412_MAG_00000003-scaffold_286; TARA_SAMEA6015412_MAG_00000003-scaffold_287; TARA_SAMEA6015412_MAG_00000003-scaffold_288; TARA_SAMEA6015412_MAG_00000003-scaffold_289; TARA_SAMEA6015412_MAG_00000003-scaffold_290; TARA_SAMEA6015412_MAG_00000003-scaffold_291; TARA_SAMEA6015412_MAG_00000003-scaffold_292; TARA_SAMEA6015412_MAG_00000003-scaffold_293; TARA_SAMEA6015412_MAG_00000003-scaffold_295; TARA_SAMEA6015412_MAG_00000003-scaffold_296; TARA_SAMEA6015412_MAG_00000003-scaffold_297; TARA_SAMEA6015412_MAG_00000003-scaffold_298; TARA_SAMEA6015412_MAG_00000003-scaffold_299

Compact view

TARA_SAMEA6015412_MAG_00000003-scaffold_3 - Region 1 - NRPS-like,T1PKS

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Location: 1 - 34,523 nt. (total: 34,523 nt) Show pHMM detection rules used

Region on contig edge.

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))
T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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NRPS/PKS domains

NRPS/PKS modules

Detailed domain annotation

Selected features only

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Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 34523:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (ohmal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6015412_MAG_00000003-scaffold_3_6

CAL_domain (38..479): pk

minowa: NH2

Prediction, score:

NH2: 28.7
fatty_acid: 17.2
AHBA: 4.0
Acetyl-CoA: 3.7
shikimic_acid: 0.0

PKS_AT (1204..1495): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 100.0%; inactive: 95.8%; 2-Rhyd-Malonyl-CoA: 54.2%

minowa: inactive

Prediction, score:

inactive: 189.8
Malonyl-CoA: 178.2
Methoxymalonyl-CoA: 59.7
Methylmalonyl-CoA: 47.5
Isobutyryl-CoA: 30.4
Propionyl-CoA: 25.5
Benzoyl-CoA: 22.9
Acetyl-CoA: 11.2
CHC-CoA: 10.6
Ethylmalonyl-CoA: 10.3
2-Methylbutyryl-CoA: 9.7
trans-1,2-CPDA: 0.0
fatty_acid: 0.0
3-Methylbutyryl-CoA: 0.0

TARA_SAMEA6015412_MAG_00000003-scaffold_4 - Region 1 - terpene

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Location: 15,893 - 35,077 nt. (total: 19,185 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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TARA_SAMEA6015412_MAG_00000003-scaffold_5 - Region 1 - CDPS

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Location: 1 - 11,443 nt. (total: 11,443 nt) Show pHMM detection rules used

Region on contig edge.

CDPS: (CDPS or cycdipepsynth)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

TARA_SAMEA6015412_MAG_00000003-scaffold_17 - Region 1 - hglE-KS

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Location: 1 - 27,098 nt. (total: 27,098 nt) Show pHMM detection rules used

Region on contig edge.

hglE-KS: (hglE or hglD)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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NRPS/PKS domains

NRPS/PKS modules

Detailed domain annotation

Selected features only

Show module domains

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 27098:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (mal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6015412_MAG_00000003-scaffold_17_14

PKS_AT (1235..1385): pk

ATSignature: (unknown)

No matches above 50%

minowa: trans-1,2-CPDA

Prediction, score:

trans-1,2-CPDA: 0.0
inactive: 0.0
fatty_acid: 0.0
Propionyl-CoA: 0.0
Methylmalonyl-CoA: 0.0
Methoxymalonyl-CoA: 0.0
Malonyl-CoA: 0.0
Isobutyryl-CoA: 0.0
Ethylmalonyl-CoA: 0.0
CHC-CoA: 0.0
Benzoyl-CoA: 0.0
Acetyl-CoA: 0.0
3-Methylbutyryl-CoA: 0.0
2-Methylbutyryl-CoA: 0.0

TARA_SAMEA6015412_MAG_00000003-scaffold_17_16

PKS_AT (587..895): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 70.8%; inactive: 66.7%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 78.8
Methoxymalonyl-CoA: 31.2
Methylmalonyl-CoA: 25.2
inactive: 20.7
CHC-CoA: 17.6
trans-1,2-CPDA: 0.0
fatty_acid: 0.0
Propionyl-CoA: 0.0
Isobutyryl-CoA: 0.0
Ethylmalonyl-CoA: 0.0
Benzoyl-CoA: 0.0
Acetyl-CoA: 0.0
3-Methylbutyryl-CoA: 0.0
2-Methylbutyryl-CoA: 0.0

TARA_SAMEA6015412_MAG_00000003-scaffold_36 - Region 1 - proteusin

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Location: 2,247 - 22,727 nt. (total: 20,481 nt) Show pHMM detection rules used

Region on contig edge.

proteusin: (PoyD or TIGR03793)

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TARA_SAMEA6015412_MAG_00000003-scaffold_50 - Region 1 - siderophore

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Location: 3,283 - 20,181 nt. (total: 16,899 nt) Show pHMM detection rules used

siderophore: IucA_IucC

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TARA_SAMEA6015412_MAG_00000003-scaffold_72 - Region 1 - terpene

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Location: 1,239 - 18,055 nt. (total: 16,817 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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TARA_SAMEA6015412_MAG_00000003-scaffold_107 - Region 1 - lanthipeptide-class-ii

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Location: 1 - 14,755 nt. (total: 14,755 nt) Show pHMM detection rules used

Region on contig edge.

lanthipeptide-class-ii: cds(LANC_like and DUF4135)

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Lanthipeptides

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Lanthipeptides

Core peptide predictions

No core peptides found.

TARA_SAMEA6015412_MAG_00000003-scaffold_182 - Region 1 - T3PKS

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Location: 1 - 9,454 nt. (total: 9,454 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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TARA_SAMEA6015412_MAG_00000003-scaffold_186 - Region 1 - proteusin

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Location: 1 - 9,321 nt. (total: 9,321 nt) Show pHMM detection rules used

Region on contig edge.

proteusin: (PoyD or TIGR03793)

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TARA_SAMEA6015412_MAG_00000003-scaffold_222 - Region 1 - NRPS

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Location: 1 - 7,515 nt. (total: 7,515 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

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NRPS/PKS domains

NRPS/PKS modules

Detailed domain annotation

Selected features only

Show module domains

Module view

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NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 7515:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (asn)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6015412_MAG_00000003-scaffold_222_2

Search NORINE for peptide: strict or relaxed

AMP-binding (470..872): asn

NRPSPredictor2: asn

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: asp, asn
Single AA prediction:: asn

Stachelhaus prediction details:

Stachelhaus sequence:: DATKiGEVGK
Nearest Stachelhaus code:: asn
Stachelhaus code match:: 90% (moderate)

TARA_SAMEA6015412_MAG_00000003-scaffold_294 - Region 1 - terpene

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Location: 1 - 5,227 nt. (total: 5,227 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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