TARA_SAMEA6013272_MAG_00000001 - 11 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

TARA_SAMEA6013272_MAG_00000001-scaffold_17

Region	Type	From	To	Most similar known cluster		Similarity
Region 17.1	terpene	1	15,315

TARA_SAMEA6013272_MAG_00000001-scaffold_22

Region	Type	From	To	Most similar known cluster		Similarity
Region 22.1	NRPS-like,T1PKS	1	28,680

TARA_SAMEA6013272_MAG_00000001-scaffold_23

Region	Type	From	To	Most similar known cluster		Similarity
Region 23.1	CDPS	7,779	28,640

TARA_SAMEA6013272_MAG_00000001-scaffold_28

Region	Type	From	To	Most similar known cluster		Similarity
Region 28.1	hglE-KS	1	26,662

TARA_SAMEA6013272_MAG_00000001-scaffold_43

Region	Type	From	To	Most similar known cluster		Similarity
Region 43.1	proteusin	2,473	22,911

TARA_SAMEA6013272_MAG_00000001-scaffold_45

Region	Type	From	To	Most similar known cluster		Similarity
Region 45.1	siderophore	5,246	22,144

TARA_SAMEA6013272_MAG_00000001-scaffold_59

Region	Type	From	To	Most similar known cluster		Similarity
Region 59.1	terpene	1	20,195

TARA_SAMEA6013272_MAG_00000001-scaffold_62

Region	Type	From	To	Most similar known cluster		Similarity
Region 62.1	T3PKS	1	19,621

TARA_SAMEA6013272_MAG_00000001-scaffold_130

Region	Type	From	To	Most similar known cluster		Similarity
Region 130.1	NRPS,T1PKS	1	10,807

TARA_SAMEA6013272_MAG_00000001-scaffold_161

Region	Type	From	To	Most similar known cluster		Similarity
Region 161.1	NRPS-like	1	8,654

TARA_SAMEA6013272_MAG_00000001-scaffold_167

Region	Type	From	To	Most similar known cluster		Similarity
Region 167.1	NRPS	1	8,346

Region	Type	From	To	Similarity
Region 17.1	terpene	1	15,315
Region 22.1	NRPS-like,T1PKS	1	28,680
Region 23.1	CDPS	7,779	28,640
Region 28.1	hglE-KS	1	26,662
Region 43.1	proteusin	2,473	22,911
Region 45.1	siderophore	5,246	22,144
Region 59.1	terpene	1	20,195
Region 62.1	T3PKS	1	19,621
Region 130.1	NRPS,T1PKS	1	10,807
Region 161.1	NRPS-like	1	8,654
Region 167.1	NRPS	1	8,346

No secondary metabolite regions were found in these records:: TARA_SAMEA6013272_MAG_00000001-scaffold_1; TARA_SAMEA6013272_MAG_00000001-scaffold_2; TARA_SAMEA6013272_MAG_00000001-scaffold_3; TARA_SAMEA6013272_MAG_00000001-scaffold_4; TARA_SAMEA6013272_MAG_00000001-scaffold_5; TARA_SAMEA6013272_MAG_00000001-scaffold_6; TARA_SAMEA6013272_MAG_00000001-scaffold_7; TARA_SAMEA6013272_MAG_00000001-scaffold_8; TARA_SAMEA6013272_MAG_00000001-scaffold_9; TARA_SAMEA6013272_MAG_00000001-scaffold_10; TARA_SAMEA6013272_MAG_00000001-scaffold_11; TARA_SAMEA6013272_MAG_00000001-scaffold_12; TARA_SAMEA6013272_MAG_00000001-scaffold_13; TARA_SAMEA6013272_MAG_00000001-scaffold_14; TARA_SAMEA6013272_MAG_00000001-scaffold_15; TARA_SAMEA6013272_MAG_00000001-scaffold_16; TARA_SAMEA6013272_MAG_00000001-scaffold_18; TARA_SAMEA6013272_MAG_00000001-scaffold_19; TARA_SAMEA6013272_MAG_00000001-scaffold_20; TARA_SAMEA6013272_MAG_00000001-scaffold_21; TARA_SAMEA6013272_MAG_00000001-scaffold_24; TARA_SAMEA6013272_MAG_00000001-scaffold_25; TARA_SAMEA6013272_MAG_00000001-scaffold_26; TARA_SAMEA6013272_MAG_00000001-scaffold_27; TARA_SAMEA6013272_MAG_00000001-scaffold_29; TARA_SAMEA6013272_MAG_00000001-scaffold_30; TARA_SAMEA6013272_MAG_00000001-scaffold_31; TARA_SAMEA6013272_MAG_00000001-scaffold_32; TARA_SAMEA6013272_MAG_00000001-scaffold_33; TARA_SAMEA6013272_MAG_00000001-scaffold_34; TARA_SAMEA6013272_MAG_00000001-scaffold_35; TARA_SAMEA6013272_MAG_00000001-scaffold_36; TARA_SAMEA6013272_MAG_00000001-scaffold_37; TARA_SAMEA6013272_MAG_00000001-scaffold_38; TARA_SAMEA6013272_MAG_00000001-scaffold_39; TARA_SAMEA6013272_MAG_00000001-scaffold_40; TARA_SAMEA6013272_MAG_00000001-scaffold_41; TARA_SAMEA6013272_MAG_00000001-scaffold_42; TARA_SAMEA6013272_MAG_00000001-scaffold_44; TARA_SAMEA6013272_MAG_00000001-scaffold_46; TARA_SAMEA6013272_MAG_00000001-scaffold_47; TARA_SAMEA6013272_MAG_00000001-scaffold_48; TARA_SAMEA6013272_MAG_00000001-scaffold_49; TARA_SAMEA6013272_MAG_00000001-scaffold_50; TARA_SAMEA6013272_MAG_00000001-scaffold_51; TARA_SAMEA6013272_MAG_00000001-scaffold_52; TARA_SAMEA6013272_MAG_00000001-scaffold_53; TARA_SAMEA6013272_MAG_00000001-scaffold_54; TARA_SAMEA6013272_MAG_00000001-scaffold_55; TARA_SAMEA6013272_MAG_00000001-scaffold_56; TARA_SAMEA6013272_MAG_00000001-scaffold_57; TARA_SAMEA6013272_MAG_00000001-scaffold_58; TARA_SAMEA6013272_MAG_00000001-scaffold_60; TARA_SAMEA6013272_MAG_00000001-scaffold_61; TARA_SAMEA6013272_MAG_00000001-scaffold_63; TARA_SAMEA6013272_MAG_00000001-scaffold_64; TARA_SAMEA6013272_MAG_00000001-scaffold_65; TARA_SAMEA6013272_MAG_00000001-scaffold_66; TARA_SAMEA6013272_MAG_00000001-scaffold_67; TARA_SAMEA6013272_MAG_00000001-scaffold_68; TARA_SAMEA6013272_MAG_00000001-scaffold_69; TARA_SAMEA6013272_MAG_00000001-scaffold_70; TARA_SAMEA6013272_MAG_00000001-scaffold_71; TARA_SAMEA6013272_MAG_00000001-scaffold_72; TARA_SAMEA6013272_MAG_00000001-scaffold_73; TARA_SAMEA6013272_MAG_00000001-scaffold_74; TARA_SAMEA6013272_MAG_00000001-scaffold_75; TARA_SAMEA6013272_MAG_00000001-scaffold_76; TARA_SAMEA6013272_MAG_00000001-scaffold_77; TARA_SAMEA6013272_MAG_00000001-scaffold_78; TARA_SAMEA6013272_MAG_00000001-scaffold_79; TARA_SAMEA6013272_MAG_00000001-scaffold_80; TARA_SAMEA6013272_MAG_00000001-scaffold_81; TARA_SAMEA6013272_MAG_00000001-scaffold_82; TARA_SAMEA6013272_MAG_00000001-scaffold_83; TARA_SAMEA6013272_MAG_00000001-scaffold_84; TARA_SAMEA6013272_MAG_00000001-scaffold_85; TARA_SAMEA6013272_MAG_00000001-scaffold_86; TARA_SAMEA6013272_MAG_00000001-scaffold_87; TARA_SAMEA6013272_MAG_00000001-scaffold_88; TARA_SAMEA6013272_MAG_00000001-scaffold_89; TARA_SAMEA6013272_MAG_00000001-scaffold_90; TARA_SAMEA6013272_MAG_00000001-scaffold_91; TARA_SAMEA6013272_MAG_00000001-scaffold_92; TARA_SAMEA6013272_MAG_00000001-scaffold_93; TARA_SAMEA6013272_MAG_00000001-scaffold_94; TARA_SAMEA6013272_MAG_00000001-scaffold_95; TARA_SAMEA6013272_MAG_00000001-scaffold_96; TARA_SAMEA6013272_MAG_00000001-scaffold_97; TARA_SAMEA6013272_MAG_00000001-scaffold_98; TARA_SAMEA6013272_MAG_00000001-scaffold_99; TARA_SAMEA6013272_MAG_00000001-scaffold_100; TARA_SAMEA6013272_MAG_00000001-scaffold_101; TARA_SAMEA6013272_MAG_00000001-scaffold_102; TARA_SAMEA6013272_MAG_00000001-scaffold_103; TARA_SAMEA6013272_MAG_00000001-scaffold_104; TARA_SAMEA6013272_MAG_00000001-scaffold_105; TARA_SAMEA6013272_MAG_00000001-scaffold_106; TARA_SAMEA6013272_MAG_00000001-scaffold_107; TARA_SAMEA6013272_MAG_00000001-scaffold_108; TARA_SAMEA6013272_MAG_00000001-scaffold_109; TARA_SAMEA6013272_MAG_00000001-scaffold_110; TARA_SAMEA6013272_MAG_00000001-scaffold_111; TARA_SAMEA6013272_MAG_00000001-scaffold_112; TARA_SAMEA6013272_MAG_00000001-scaffold_113; TARA_SAMEA6013272_MAG_00000001-scaffold_114; TARA_SAMEA6013272_MAG_00000001-scaffold_115; TARA_SAMEA6013272_MAG_00000001-scaffold_116; TARA_SAMEA6013272_MAG_00000001-scaffold_117; TARA_SAMEA6013272_MAG_00000001-scaffold_118; TARA_SAMEA6013272_MAG_00000001-scaffold_119; TARA_SAMEA6013272_MAG_00000001-scaffold_120; TARA_SAMEA6013272_MAG_00000001-scaffold_121; TARA_SAMEA6013272_MAG_00000001-scaffold_122; TARA_SAMEA6013272_MAG_00000001-scaffold_123; TARA_SAMEA6013272_MAG_00000001-scaffold_124; TARA_SAMEA6013272_MAG_00000001-scaffold_125; TARA_SAMEA6013272_MAG_00000001-scaffold_126; TARA_SAMEA6013272_MAG_00000001-scaffold_127; TARA_SAMEA6013272_MAG_00000001-scaffold_128; TARA_SAMEA6013272_MAG_00000001-scaffold_129; TARA_SAMEA6013272_MAG_00000001-scaffold_131; TARA_SAMEA6013272_MAG_00000001-scaffold_132; TARA_SAMEA6013272_MAG_00000001-scaffold_133; TARA_SAMEA6013272_MAG_00000001-scaffold_134; TARA_SAMEA6013272_MAG_00000001-scaffold_135; TARA_SAMEA6013272_MAG_00000001-scaffold_136; TARA_SAMEA6013272_MAG_00000001-scaffold_137; TARA_SAMEA6013272_MAG_00000001-scaffold_138; TARA_SAMEA6013272_MAG_00000001-scaffold_139; TARA_SAMEA6013272_MAG_00000001-scaffold_140; TARA_SAMEA6013272_MAG_00000001-scaffold_141; TARA_SAMEA6013272_MAG_00000001-scaffold_142; TARA_SAMEA6013272_MAG_00000001-scaffold_143; TARA_SAMEA6013272_MAG_00000001-scaffold_144; TARA_SAMEA6013272_MAG_00000001-scaffold_145; TARA_SAMEA6013272_MAG_00000001-scaffold_146; TARA_SAMEA6013272_MAG_00000001-scaffold_147; TARA_SAMEA6013272_MAG_00000001-scaffold_148; TARA_SAMEA6013272_MAG_00000001-scaffold_149; TARA_SAMEA6013272_MAG_00000001-scaffold_150; TARA_SAMEA6013272_MAG_00000001-scaffold_151; TARA_SAMEA6013272_MAG_00000001-scaffold_152; TARA_SAMEA6013272_MAG_00000001-scaffold_153; TARA_SAMEA6013272_MAG_00000001-scaffold_154; TARA_SAMEA6013272_MAG_00000001-scaffold_155; TARA_SAMEA6013272_MAG_00000001-scaffold_156; TARA_SAMEA6013272_MAG_00000001-scaffold_157; TARA_SAMEA6013272_MAG_00000001-scaffold_158; TARA_SAMEA6013272_MAG_00000001-scaffold_159; TARA_SAMEA6013272_MAG_00000001-scaffold_160; TARA_SAMEA6013272_MAG_00000001-scaffold_162; TARA_SAMEA6013272_MAG_00000001-scaffold_163; TARA_SAMEA6013272_MAG_00000001-scaffold_164; TARA_SAMEA6013272_MAG_00000001-scaffold_165; TARA_SAMEA6013272_MAG_00000001-scaffold_166; TARA_SAMEA6013272_MAG_00000001-scaffold_168; TARA_SAMEA6013272_MAG_00000001-scaffold_169; TARA_SAMEA6013272_MAG_00000001-scaffold_170; TARA_SAMEA6013272_MAG_00000001-scaffold_171; TARA_SAMEA6013272_MAG_00000001-scaffold_172; TARA_SAMEA6013272_MAG_00000001-scaffold_173; TARA_SAMEA6013272_MAG_00000001-scaffold_174; TARA_SAMEA6013272_MAG_00000001-scaffold_175; TARA_SAMEA6013272_MAG_00000001-scaffold_176; TARA_SAMEA6013272_MAG_00000001-scaffold_177; TARA_SAMEA6013272_MAG_00000001-scaffold_178; TARA_SAMEA6013272_MAG_00000001-scaffold_179; TARA_SAMEA6013272_MAG_00000001-scaffold_180; TARA_SAMEA6013272_MAG_00000001-scaffold_181; TARA_SAMEA6013272_MAG_00000001-scaffold_182; TARA_SAMEA6013272_MAG_00000001-scaffold_183; TARA_SAMEA6013272_MAG_00000001-scaffold_184; TARA_SAMEA6013272_MAG_00000001-scaffold_185; TARA_SAMEA6013272_MAG_00000001-scaffold_186; TARA_SAMEA6013272_MAG_00000001-scaffold_187; TARA_SAMEA6013272_MAG_00000001-scaffold_188; TARA_SAMEA6013272_MAG_00000001-scaffold_189; TARA_SAMEA6013272_MAG_00000001-scaffold_190; TARA_SAMEA6013272_MAG_00000001-scaffold_191; TARA_SAMEA6013272_MAG_00000001-scaffold_192; TARA_SAMEA6013272_MAG_00000001-scaffold_193; TARA_SAMEA6013272_MAG_00000001-scaffold_194; TARA_SAMEA6013272_MAG_00000001-scaffold_195; TARA_SAMEA6013272_MAG_00000001-scaffold_196; TARA_SAMEA6013272_MAG_00000001-scaffold_197; TARA_SAMEA6013272_MAG_00000001-scaffold_198; TARA_SAMEA6013272_MAG_00000001-scaffold_199; TARA_SAMEA6013272_MAG_00000001-scaffold_200; TARA_SAMEA6013272_MAG_00000001-scaffold_201; TARA_SAMEA6013272_MAG_00000001-scaffold_202; TARA_SAMEA6013272_MAG_00000001-scaffold_203; TARA_SAMEA6013272_MAG_00000001-scaffold_204; TARA_SAMEA6013272_MAG_00000001-scaffold_205; TARA_SAMEA6013272_MAG_00000001-scaffold_206; TARA_SAMEA6013272_MAG_00000001-scaffold_207; TARA_SAMEA6013272_MAG_00000001-scaffold_208; TARA_SAMEA6013272_MAG_00000001-scaffold_209; TARA_SAMEA6013272_MAG_00000001-scaffold_210; TARA_SAMEA6013272_MAG_00000001-scaffold_211; TARA_SAMEA6013272_MAG_00000001-scaffold_212; TARA_SAMEA6013272_MAG_00000001-scaffold_213; TARA_SAMEA6013272_MAG_00000001-scaffold_214; TARA_SAMEA6013272_MAG_00000001-scaffold_215; TARA_SAMEA6013272_MAG_00000001-scaffold_216; TARA_SAMEA6013272_MAG_00000001-scaffold_217; TARA_SAMEA6013272_MAG_00000001-scaffold_218; TARA_SAMEA6013272_MAG_00000001-scaffold_219; TARA_SAMEA6013272_MAG_00000001-scaffold_220; TARA_SAMEA6013272_MAG_00000001-scaffold_221; TARA_SAMEA6013272_MAG_00000001-scaffold_222; TARA_SAMEA6013272_MAG_00000001-scaffold_223; TARA_SAMEA6013272_MAG_00000001-scaffold_224; TARA_SAMEA6013272_MAG_00000001-scaffold_225; TARA_SAMEA6013272_MAG_00000001-scaffold_226; TARA_SAMEA6013272_MAG_00000001-scaffold_227; TARA_SAMEA6013272_MAG_00000001-scaffold_228; TARA_SAMEA6013272_MAG_00000001-scaffold_229; TARA_SAMEA6013272_MAG_00000001-scaffold_230; TARA_SAMEA6013272_MAG_00000001-scaffold_231; TARA_SAMEA6013272_MAG_00000001-scaffold_232; TARA_SAMEA6013272_MAG_00000001-scaffold_233; TARA_SAMEA6013272_MAG_00000001-scaffold_234; TARA_SAMEA6013272_MAG_00000001-scaffold_235; TARA_SAMEA6013272_MAG_00000001-scaffold_236; TARA_SAMEA6013272_MAG_00000001-scaffold_237; TARA_SAMEA6013272_MAG_00000001-scaffold_238; TARA_SAMEA6013272_MAG_00000001-scaffold_239; TARA_SAMEA6013272_MAG_00000001-scaffold_240; TARA_SAMEA6013272_MAG_00000001-scaffold_241; TARA_SAMEA6013272_MAG_00000001-scaffold_242; TARA_SAMEA6013272_MAG_00000001-scaffold_243; TARA_SAMEA6013272_MAG_00000001-scaffold_244; TARA_SAMEA6013272_MAG_00000001-scaffold_245; TARA_SAMEA6013272_MAG_00000001-scaffold_246; TARA_SAMEA6013272_MAG_00000001-scaffold_247; TARA_SAMEA6013272_MAG_00000001-scaffold_248; TARA_SAMEA6013272_MAG_00000001-scaffold_249; TARA_SAMEA6013272_MAG_00000001-scaffold_250; TARA_SAMEA6013272_MAG_00000001-scaffold_251; TARA_SAMEA6013272_MAG_00000001-scaffold_252; TARA_SAMEA6013272_MAG_00000001-scaffold_253

Compact view

TARA_SAMEA6013272_MAG_00000001-scaffold_17 - Region 1 - terpene

Download region GenBank file

Download region SVG

Location: 1 - 15,315 nt. (total: 15,315 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

TARA_SAMEA6013272_MAG_00000001-scaffold_22 - Region 1 - NRPS-like,T1PKS

Download region GenBank file

Download region SVG

Location: 1 - 28,680 nt. (total: 28,680 nt) Show pHMM detection rules used

Region on contig edge.

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))
T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

NRPS/PKS modules

Detailed domain annotation

Selected features only

Show module domains

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 28680:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (ohmal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6013272_MAG_00000001-scaffold_22_5

CAL_domain (38..479): pk

minowa: NH2

Prediction, score:

NH2: 28.7
fatty_acid: 17.2
AHBA: 4.0
Acetyl-CoA: 3.7
shikimic_acid: 0.0

PKS_AT (1204..1495): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 100.0%; inactive: 95.8%; 2-Rhyd-Malonyl-CoA: 54.2%

minowa: inactive

Prediction, score:

inactive: 189.9
Malonyl-CoA: 182.4
Methoxymalonyl-CoA: 66.8
Methylmalonyl-CoA: 55.5
Isobutyryl-CoA: 37.2
Benzoyl-CoA: 31.2
Propionyl-CoA: 29.6
Ethylmalonyl-CoA: 18.9
Acetyl-CoA: 15.7
2-Methylbutyryl-CoA: 10.6
CHC-CoA: 10.4
trans-1,2-CPDA: 0.0
fatty_acid: 0.0
3-Methylbutyryl-CoA: 0.0

TARA_SAMEA6013272_MAG_00000001-scaffold_23 - Region 1 - CDPS

Download region GenBank file

Download region SVG

Location: 7,779 - 28,640 nt. (total: 20,862 nt) Show pHMM detection rules used

Region on contig edge.

CDPS: (CDPS or cycdipepsynth)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

TARA_SAMEA6013272_MAG_00000001-scaffold_28 - Region 1 - hglE-KS

Download region GenBank file

Download region SVG

Location: 1 - 26,662 nt. (total: 26,662 nt) Show pHMM detection rules used

Region on contig edge.

hglE-KS: (hglE or hglD)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

NRPS/PKS modules

Detailed domain annotation

Selected features only

Show module domains

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 26662:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (mal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6013272_MAG_00000001-scaffold_28_2

PKS_AT (587..895): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 70.8%; inactive: 66.7%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 78.8
Methoxymalonyl-CoA: 31.2
Methylmalonyl-CoA: 25.2
inactive: 20.7
CHC-CoA: 17.6
trans-1,2-CPDA: 0.0
fatty_acid: 0.0
Propionyl-CoA: 0.0
Isobutyryl-CoA: 0.0
Ethylmalonyl-CoA: 0.0
Benzoyl-CoA: 0.0
Acetyl-CoA: 0.0
3-Methylbutyryl-CoA: 0.0
2-Methylbutyryl-CoA: 0.0

TARA_SAMEA6013272_MAG_00000001-scaffold_28_4

PKS_AT (1235..1385): pk

ATSignature: (unknown)

No matches above 50%

minowa: trans-1,2-CPDA

Prediction, score:

trans-1,2-CPDA: 0.0
inactive: 0.0
fatty_acid: 0.0
Propionyl-CoA: 0.0
Methylmalonyl-CoA: 0.0
Methoxymalonyl-CoA: 0.0
Malonyl-CoA: 0.0
Isobutyryl-CoA: 0.0
Ethylmalonyl-CoA: 0.0
CHC-CoA: 0.0
Benzoyl-CoA: 0.0
Acetyl-CoA: 0.0
3-Methylbutyryl-CoA: 0.0
2-Methylbutyryl-CoA: 0.0

TARA_SAMEA6013272_MAG_00000001-scaffold_43 - Region 1 - proteusin

Download region GenBank file

Download region SVG

Location: 2,473 - 22,911 nt. (total: 20,439 nt) Show pHMM detection rules used

Region on contig edge.

proteusin: (PoyD or TIGR03793)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

TARA_SAMEA6013272_MAG_00000001-scaffold_45 - Region 1 - siderophore

Download region GenBank file

Download region SVG

Location: 5,246 - 22,144 nt. (total: 16,899 nt) Show pHMM detection rules used

siderophore: IucA_IucC

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

TARA_SAMEA6013272_MAG_00000001-scaffold_59 - Region 1 - terpene

Download region GenBank file

Download region SVG

Location: 1 - 20,195 nt. (total: 20,195 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

TARA_SAMEA6013272_MAG_00000001-scaffold_62 - Region 1 - T3PKS

Download region GenBank file

Download region SVG

Location: 1 - 19,621 nt. (total: 19,621 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

TARA_SAMEA6013272_MAG_00000001-scaffold_130 - Region 1 - NRPS,T1PKS

Download region GenBank file

Download region SVG

Location: 1 - 10,807 nt. (total: 10,807 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))
T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

NRPS/PKS modules

Detailed domain annotation

Selected features only

Show module domains

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 10807:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (mal - D-X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6013272_MAG_00000001-scaffold_130_1

Search NORINE for peptide: strict or relaxed

PKS_AT (204..503): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 91.7%; inactive: 87.5%; 2-Rhyd-Malonyl-CoA: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 163.4
inactive: 134.4
Methylmalonyl-CoA: 45.9
Methoxymalonyl-CoA: 43.9
Isobutyryl-CoA: 37.9
Propionyl-CoA: 32.1
Acetyl-CoA: 19.7
Benzoyl-CoA: 15.8
2-Methylbutyryl-CoA: 12.4
CHC-CoA: 11.5
trans-1,2-CPDA: 0.0
fatty_acid: 0.0
Ethylmalonyl-CoA: 0.0
3-Methylbutyryl-CoA: 0.0

AMP-binding (1717..2125): X

NRPSPredictor2: orn, lys, arg

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: orn, lys, arg
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DvENiGaItK
Nearest Stachelhaus code:: orn
Stachelhaus code match:: 60% (weak)

TARA_SAMEA6013272_MAG_00000001-scaffold_161 - Region 1 - NRPS-like

Download region GenBank file

Download region SVG

Location: 1 - 8,654 nt. (total: 8,654 nt) Show pHMM detection rules used

Region on contig edge.

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

TARA_SAMEA6013272_MAG_00000001-scaffold_167 - Region 1 - NRPS

Download region GenBank file

Download region SVG

Location: 1 - 8,346 nt. (total: 8,346 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

NRPS/PKS modules

Detailed domain annotation

Selected features only

Show module domains

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 8346:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (ser)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6013272_MAG_00000001-scaffold_167_1

Search NORINE for peptide: strict or relaxed

AMP-binding (492..889): ser

NRPSPredictor2: ser

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: ser, thr, dhpg, hpg
Small clusters prediction:: ser
Single AA prediction:: ser

Stachelhaus prediction details:

Stachelhaus sequence:: DVWHISLIDK
Nearest Stachelhaus code:: ser
Stachelhaus code match:: 100% (strong)