TARA_SAMEA6012768_MAG_00000005 - 13 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

TARA_SAMEA6012768_MAG_00000005-scaffold_1

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	siderophore	52,082	68,977

TARA_SAMEA6012768_MAG_00000005-scaffold_4

Region	Type	From	To	Most similar known cluster		Similarity
Region 4.1	NRPS	13,330	45,473

TARA_SAMEA6012768_MAG_00000005-scaffold_23

Region	Type	From	To	Most similar known cluster		Similarity
Region 23.1	CDPS	6,165	27,325

TARA_SAMEA6012768_MAG_00000005-scaffold_26

Region	Type	From	To	Most similar known cluster		Similarity
Region 26.1	terpene	14,950	27,097

TARA_SAMEA6012768_MAG_00000005-scaffold_28

Region	Type	From	To	Most similar known cluster		Similarity
Region 28.1	hglE-KS	1	26,861

TARA_SAMEA6012768_MAG_00000005-scaffold_49

Region	Type	From	To	Most similar known cluster		Similarity
Region 49.1	T1PKS	1	22,374

TARA_SAMEA6012768_MAG_00000005-scaffold_50

Region	Type	From	To	Most similar known cluster		Similarity
Region 50.1	proteusin	1,804	22,241

TARA_SAMEA6012768_MAG_00000005-scaffold_82

Region	Type	From	To	Most similar known cluster		Similarity
Region 82.1	terpene	1,697	17,749

TARA_SAMEA6012768_MAG_00000005-scaffold_111

Region	Type	From	To	Most similar known cluster		Similarity
Region 111.1	lanthipeptide-class-ii	1	13,758

TARA_SAMEA6012768_MAG_00000005-scaffold_133

Region	Type	From	To	Most similar known cluster		Similarity
Region 133.1	terpene	1	11,842

TARA_SAMEA6012768_MAG_00000005-scaffold_141

Region	Type	From	To	Most similar known cluster		Similarity
Region 141.1	T3PKS	1	11,473

TARA_SAMEA6012768_MAG_00000005-scaffold_154

Region	Type	From	To	Most similar known cluster		Similarity
Region 154.1	NRPS	1	10,702

TARA_SAMEA6012768_MAG_00000005-scaffold_181

Region	Type	From	To	Most similar known cluster		Similarity
Region 181.1	RRE-containing	1	9,075

Region	Type	From	To	Similarity
Region 1.1	siderophore	52,082	68,977
Region 4.1	NRPS	13,330	45,473
Region 23.1	CDPS	6,165	27,325
Region 26.1	terpene	14,950	27,097
Region 28.1	hglE-KS	1	26,861
Region 49.1	T1PKS	1	22,374
Region 50.1	proteusin	1,804	22,241
Region 82.1	terpene	1,697	17,749
Region 111.1	lanthipeptide-class-ii	1	13,758
Region 133.1	terpene	1	11,842
Region 141.1	T3PKS	1	11,473
Region 154.1	NRPS	1	10,702
Region 181.1	RRE-containing	1	9,075

No secondary metabolite regions were found in these records:: TARA_SAMEA6012768_MAG_00000005-scaffold_2; TARA_SAMEA6012768_MAG_00000005-scaffold_3; TARA_SAMEA6012768_MAG_00000005-scaffold_5; TARA_SAMEA6012768_MAG_00000005-scaffold_6; TARA_SAMEA6012768_MAG_00000005-scaffold_7; TARA_SAMEA6012768_MAG_00000005-scaffold_8; TARA_SAMEA6012768_MAG_00000005-scaffold_9; TARA_SAMEA6012768_MAG_00000005-scaffold_10; TARA_SAMEA6012768_MAG_00000005-scaffold_11; TARA_SAMEA6012768_MAG_00000005-scaffold_12; TARA_SAMEA6012768_MAG_00000005-scaffold_13; TARA_SAMEA6012768_MAG_00000005-scaffold_14; TARA_SAMEA6012768_MAG_00000005-scaffold_15; TARA_SAMEA6012768_MAG_00000005-scaffold_16; TARA_SAMEA6012768_MAG_00000005-scaffold_17; TARA_SAMEA6012768_MAG_00000005-scaffold_18; TARA_SAMEA6012768_MAG_00000005-scaffold_19; TARA_SAMEA6012768_MAG_00000005-scaffold_20; TARA_SAMEA6012768_MAG_00000005-scaffold_21; TARA_SAMEA6012768_MAG_00000005-scaffold_22; TARA_SAMEA6012768_MAG_00000005-scaffold_24; TARA_SAMEA6012768_MAG_00000005-scaffold_25; TARA_SAMEA6012768_MAG_00000005-scaffold_27; TARA_SAMEA6012768_MAG_00000005-scaffold_29; TARA_SAMEA6012768_MAG_00000005-scaffold_30; TARA_SAMEA6012768_MAG_00000005-scaffold_31; TARA_SAMEA6012768_MAG_00000005-scaffold_32; TARA_SAMEA6012768_MAG_00000005-scaffold_33; TARA_SAMEA6012768_MAG_00000005-scaffold_34; TARA_SAMEA6012768_MAG_00000005-scaffold_35; TARA_SAMEA6012768_MAG_00000005-scaffold_36; TARA_SAMEA6012768_MAG_00000005-scaffold_37; TARA_SAMEA6012768_MAG_00000005-scaffold_38; TARA_SAMEA6012768_MAG_00000005-scaffold_39; TARA_SAMEA6012768_MAG_00000005-scaffold_40; TARA_SAMEA6012768_MAG_00000005-scaffold_41; TARA_SAMEA6012768_MAG_00000005-scaffold_42; TARA_SAMEA6012768_MAG_00000005-scaffold_43; TARA_SAMEA6012768_MAG_00000005-scaffold_44; TARA_SAMEA6012768_MAG_00000005-scaffold_45; TARA_SAMEA6012768_MAG_00000005-scaffold_46; TARA_SAMEA6012768_MAG_00000005-scaffold_47; TARA_SAMEA6012768_MAG_00000005-scaffold_48; TARA_SAMEA6012768_MAG_00000005-scaffold_51; TARA_SAMEA6012768_MAG_00000005-scaffold_52; TARA_SAMEA6012768_MAG_00000005-scaffold_53; TARA_SAMEA6012768_MAG_00000005-scaffold_54; TARA_SAMEA6012768_MAG_00000005-scaffold_55; TARA_SAMEA6012768_MAG_00000005-scaffold_56; TARA_SAMEA6012768_MAG_00000005-scaffold_57; TARA_SAMEA6012768_MAG_00000005-scaffold_58; TARA_SAMEA6012768_MAG_00000005-scaffold_59; TARA_SAMEA6012768_MAG_00000005-scaffold_60; TARA_SAMEA6012768_MAG_00000005-scaffold_61; TARA_SAMEA6012768_MAG_00000005-scaffold_62; TARA_SAMEA6012768_MAG_00000005-scaffold_63; TARA_SAMEA6012768_MAG_00000005-scaffold_64; TARA_SAMEA6012768_MAG_00000005-scaffold_65; TARA_SAMEA6012768_MAG_00000005-scaffold_66; TARA_SAMEA6012768_MAG_00000005-scaffold_67; TARA_SAMEA6012768_MAG_00000005-scaffold_68; TARA_SAMEA6012768_MAG_00000005-scaffold_69; TARA_SAMEA6012768_MAG_00000005-scaffold_70; TARA_SAMEA6012768_MAG_00000005-scaffold_71; TARA_SAMEA6012768_MAG_00000005-scaffold_72; TARA_SAMEA6012768_MAG_00000005-scaffold_73; TARA_SAMEA6012768_MAG_00000005-scaffold_74; TARA_SAMEA6012768_MAG_00000005-scaffold_75; TARA_SAMEA6012768_MAG_00000005-scaffold_76; TARA_SAMEA6012768_MAG_00000005-scaffold_77; TARA_SAMEA6012768_MAG_00000005-scaffold_78; TARA_SAMEA6012768_MAG_00000005-scaffold_79; TARA_SAMEA6012768_MAG_00000005-scaffold_80; TARA_SAMEA6012768_MAG_00000005-scaffold_81; TARA_SAMEA6012768_MAG_00000005-scaffold_83; TARA_SAMEA6012768_MAG_00000005-scaffold_84; TARA_SAMEA6012768_MAG_00000005-scaffold_85; TARA_SAMEA6012768_MAG_00000005-scaffold_86; TARA_SAMEA6012768_MAG_00000005-scaffold_87; TARA_SAMEA6012768_MAG_00000005-scaffold_88; TARA_SAMEA6012768_MAG_00000005-scaffold_89; TARA_SAMEA6012768_MAG_00000005-scaffold_90; TARA_SAMEA6012768_MAG_00000005-scaffold_91; TARA_SAMEA6012768_MAG_00000005-scaffold_92; TARA_SAMEA6012768_MAG_00000005-scaffold_93; TARA_SAMEA6012768_MAG_00000005-scaffold_94; TARA_SAMEA6012768_MAG_00000005-scaffold_95; TARA_SAMEA6012768_MAG_00000005-scaffold_96; TARA_SAMEA6012768_MAG_00000005-scaffold_97; TARA_SAMEA6012768_MAG_00000005-scaffold_98; TARA_SAMEA6012768_MAG_00000005-scaffold_99; TARA_SAMEA6012768_MAG_00000005-scaffold_100; TARA_SAMEA6012768_MAG_00000005-scaffold_101; TARA_SAMEA6012768_MAG_00000005-scaffold_102; TARA_SAMEA6012768_MAG_00000005-scaffold_103; TARA_SAMEA6012768_MAG_00000005-scaffold_104; TARA_SAMEA6012768_MAG_00000005-scaffold_105; TARA_SAMEA6012768_MAG_00000005-scaffold_106; TARA_SAMEA6012768_MAG_00000005-scaffold_107; TARA_SAMEA6012768_MAG_00000005-scaffold_108; TARA_SAMEA6012768_MAG_00000005-scaffold_109; TARA_SAMEA6012768_MAG_00000005-scaffold_110; TARA_SAMEA6012768_MAG_00000005-scaffold_112; TARA_SAMEA6012768_MAG_00000005-scaffold_113; TARA_SAMEA6012768_MAG_00000005-scaffold_114; TARA_SAMEA6012768_MAG_00000005-scaffold_115; TARA_SAMEA6012768_MAG_00000005-scaffold_116; TARA_SAMEA6012768_MAG_00000005-scaffold_117; TARA_SAMEA6012768_MAG_00000005-scaffold_118; TARA_SAMEA6012768_MAG_00000005-scaffold_119; TARA_SAMEA6012768_MAG_00000005-scaffold_120; TARA_SAMEA6012768_MAG_00000005-scaffold_121; TARA_SAMEA6012768_MAG_00000005-scaffold_122; TARA_SAMEA6012768_MAG_00000005-scaffold_123; TARA_SAMEA6012768_MAG_00000005-scaffold_124; TARA_SAMEA6012768_MAG_00000005-scaffold_125; TARA_SAMEA6012768_MAG_00000005-scaffold_126; TARA_SAMEA6012768_MAG_00000005-scaffold_127; TARA_SAMEA6012768_MAG_00000005-scaffold_128; TARA_SAMEA6012768_MAG_00000005-scaffold_129; TARA_SAMEA6012768_MAG_00000005-scaffold_130; TARA_SAMEA6012768_MAG_00000005-scaffold_131; TARA_SAMEA6012768_MAG_00000005-scaffold_132; TARA_SAMEA6012768_MAG_00000005-scaffold_134; TARA_SAMEA6012768_MAG_00000005-scaffold_135; TARA_SAMEA6012768_MAG_00000005-scaffold_136; TARA_SAMEA6012768_MAG_00000005-scaffold_137; TARA_SAMEA6012768_MAG_00000005-scaffold_138; TARA_SAMEA6012768_MAG_00000005-scaffold_139; TARA_SAMEA6012768_MAG_00000005-scaffold_140; TARA_SAMEA6012768_MAG_00000005-scaffold_142; TARA_SAMEA6012768_MAG_00000005-scaffold_143; TARA_SAMEA6012768_MAG_00000005-scaffold_144; TARA_SAMEA6012768_MAG_00000005-scaffold_145; TARA_SAMEA6012768_MAG_00000005-scaffold_146; TARA_SAMEA6012768_MAG_00000005-scaffold_147; TARA_SAMEA6012768_MAG_00000005-scaffold_148; TARA_SAMEA6012768_MAG_00000005-scaffold_149; TARA_SAMEA6012768_MAG_00000005-scaffold_150; TARA_SAMEA6012768_MAG_00000005-scaffold_151; TARA_SAMEA6012768_MAG_00000005-scaffold_152; TARA_SAMEA6012768_MAG_00000005-scaffold_153; TARA_SAMEA6012768_MAG_00000005-scaffold_155; TARA_SAMEA6012768_MAG_00000005-scaffold_156; TARA_SAMEA6012768_MAG_00000005-scaffold_157; TARA_SAMEA6012768_MAG_00000005-scaffold_158; TARA_SAMEA6012768_MAG_00000005-scaffold_159; TARA_SAMEA6012768_MAG_00000005-scaffold_160; TARA_SAMEA6012768_MAG_00000005-scaffold_161; TARA_SAMEA6012768_MAG_00000005-scaffold_162; TARA_SAMEA6012768_MAG_00000005-scaffold_163; TARA_SAMEA6012768_MAG_00000005-scaffold_164; TARA_SAMEA6012768_MAG_00000005-scaffold_165; TARA_SAMEA6012768_MAG_00000005-scaffold_166; TARA_SAMEA6012768_MAG_00000005-scaffold_167; TARA_SAMEA6012768_MAG_00000005-scaffold_168; TARA_SAMEA6012768_MAG_00000005-scaffold_169; TARA_SAMEA6012768_MAG_00000005-scaffold_170; TARA_SAMEA6012768_MAG_00000005-scaffold_171; TARA_SAMEA6012768_MAG_00000005-scaffold_172; TARA_SAMEA6012768_MAG_00000005-scaffold_173; TARA_SAMEA6012768_MAG_00000005-scaffold_174; TARA_SAMEA6012768_MAG_00000005-scaffold_175; TARA_SAMEA6012768_MAG_00000005-scaffold_176; TARA_SAMEA6012768_MAG_00000005-scaffold_177; TARA_SAMEA6012768_MAG_00000005-scaffold_178; TARA_SAMEA6012768_MAG_00000005-scaffold_179; TARA_SAMEA6012768_MAG_00000005-scaffold_180; TARA_SAMEA6012768_MAG_00000005-scaffold_182; TARA_SAMEA6012768_MAG_00000005-scaffold_183; TARA_SAMEA6012768_MAG_00000005-scaffold_184; TARA_SAMEA6012768_MAG_00000005-scaffold_185; TARA_SAMEA6012768_MAG_00000005-scaffold_186; TARA_SAMEA6012768_MAG_00000005-scaffold_187; TARA_SAMEA6012768_MAG_00000005-scaffold_188; TARA_SAMEA6012768_MAG_00000005-scaffold_189; TARA_SAMEA6012768_MAG_00000005-scaffold_190; TARA_SAMEA6012768_MAG_00000005-scaffold_191; TARA_SAMEA6012768_MAG_00000005-scaffold_192; TARA_SAMEA6012768_MAG_00000005-scaffold_193; TARA_SAMEA6012768_MAG_00000005-scaffold_194; TARA_SAMEA6012768_MAG_00000005-scaffold_195; TARA_SAMEA6012768_MAG_00000005-scaffold_196; TARA_SAMEA6012768_MAG_00000005-scaffold_197; TARA_SAMEA6012768_MAG_00000005-scaffold_198; TARA_SAMEA6012768_MAG_00000005-scaffold_199; TARA_SAMEA6012768_MAG_00000005-scaffold_200; TARA_SAMEA6012768_MAG_00000005-scaffold_201; TARA_SAMEA6012768_MAG_00000005-scaffold_202; TARA_SAMEA6012768_MAG_00000005-scaffold_203; TARA_SAMEA6012768_MAG_00000005-scaffold_204; TARA_SAMEA6012768_MAG_00000005-scaffold_205; TARA_SAMEA6012768_MAG_00000005-scaffold_206; TARA_SAMEA6012768_MAG_00000005-scaffold_207; TARA_SAMEA6012768_MAG_00000005-scaffold_208; TARA_SAMEA6012768_MAG_00000005-scaffold_209; TARA_SAMEA6012768_MAG_00000005-scaffold_210; TARA_SAMEA6012768_MAG_00000005-scaffold_211; TARA_SAMEA6012768_MAG_00000005-scaffold_212; TARA_SAMEA6012768_MAG_00000005-scaffold_213; TARA_SAMEA6012768_MAG_00000005-scaffold_214; TARA_SAMEA6012768_MAG_00000005-scaffold_215; TARA_SAMEA6012768_MAG_00000005-scaffold_216; TARA_SAMEA6012768_MAG_00000005-scaffold_217; TARA_SAMEA6012768_MAG_00000005-scaffold_218; TARA_SAMEA6012768_MAG_00000005-scaffold_219; TARA_SAMEA6012768_MAG_00000005-scaffold_220; TARA_SAMEA6012768_MAG_00000005-scaffold_221; TARA_SAMEA6012768_MAG_00000005-scaffold_222; TARA_SAMEA6012768_MAG_00000005-scaffold_223; TARA_SAMEA6012768_MAG_00000005-scaffold_224; TARA_SAMEA6012768_MAG_00000005-scaffold_225; TARA_SAMEA6012768_MAG_00000005-scaffold_226; TARA_SAMEA6012768_MAG_00000005-scaffold_227; TARA_SAMEA6012768_MAG_00000005-scaffold_228; TARA_SAMEA6012768_MAG_00000005-scaffold_229; TARA_SAMEA6012768_MAG_00000005-scaffold_230; TARA_SAMEA6012768_MAG_00000005-scaffold_231; TARA_SAMEA6012768_MAG_00000005-scaffold_232; TARA_SAMEA6012768_MAG_00000005-scaffold_233; TARA_SAMEA6012768_MAG_00000005-scaffold_234; TARA_SAMEA6012768_MAG_00000005-scaffold_235; TARA_SAMEA6012768_MAG_00000005-scaffold_236; TARA_SAMEA6012768_MAG_00000005-scaffold_237; TARA_SAMEA6012768_MAG_00000005-scaffold_238; TARA_SAMEA6012768_MAG_00000005-scaffold_239; TARA_SAMEA6012768_MAG_00000005-scaffold_240; TARA_SAMEA6012768_MAG_00000005-scaffold_241; TARA_SAMEA6012768_MAG_00000005-scaffold_242; TARA_SAMEA6012768_MAG_00000005-scaffold_243; TARA_SAMEA6012768_MAG_00000005-scaffold_244; TARA_SAMEA6012768_MAG_00000005-scaffold_245; TARA_SAMEA6012768_MAG_00000005-scaffold_246; TARA_SAMEA6012768_MAG_00000005-scaffold_247; TARA_SAMEA6012768_MAG_00000005-scaffold_248; TARA_SAMEA6012768_MAG_00000005-scaffold_249; TARA_SAMEA6012768_MAG_00000005-scaffold_250; TARA_SAMEA6012768_MAG_00000005-scaffold_251; TARA_SAMEA6012768_MAG_00000005-scaffold_252; TARA_SAMEA6012768_MAG_00000005-scaffold_253; TARA_SAMEA6012768_MAG_00000005-scaffold_254; TARA_SAMEA6012768_MAG_00000005-scaffold_255; TARA_SAMEA6012768_MAG_00000005-scaffold_256; TARA_SAMEA6012768_MAG_00000005-scaffold_257; TARA_SAMEA6012768_MAG_00000005-scaffold_258; TARA_SAMEA6012768_MAG_00000005-scaffold_259; TARA_SAMEA6012768_MAG_00000005-scaffold_260; TARA_SAMEA6012768_MAG_00000005-scaffold_261; TARA_SAMEA6012768_MAG_00000005-scaffold_262; TARA_SAMEA6012768_MAG_00000005-scaffold_263; TARA_SAMEA6012768_MAG_00000005-scaffold_264; TARA_SAMEA6012768_MAG_00000005-scaffold_265; TARA_SAMEA6012768_MAG_00000005-scaffold_266; TARA_SAMEA6012768_MAG_00000005-scaffold_267; TARA_SAMEA6012768_MAG_00000005-scaffold_268; TARA_SAMEA6012768_MAG_00000005-scaffold_269; TARA_SAMEA6012768_MAG_00000005-scaffold_270; TARA_SAMEA6012768_MAG_00000005-scaffold_271; TARA_SAMEA6012768_MAG_00000005-scaffold_272; TARA_SAMEA6012768_MAG_00000005-scaffold_273; TARA_SAMEA6012768_MAG_00000005-scaffold_274; TARA_SAMEA6012768_MAG_00000005-scaffold_275; TARA_SAMEA6012768_MAG_00000005-scaffold_276; TARA_SAMEA6012768_MAG_00000005-scaffold_277; TARA_SAMEA6012768_MAG_00000005-scaffold_278; TARA_SAMEA6012768_MAG_00000005-scaffold_279; TARA_SAMEA6012768_MAG_00000005-scaffold_280

Compact view

TARA_SAMEA6012768_MAG_00000005-scaffold_1 - Region 1 - siderophore

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Location: 52,082 - 68,977 nt. (total: 16,896 nt) Show pHMM detection rules used

siderophore: IucA_IucC

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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TARA_SAMEA6012768_MAG_00000005-scaffold_4 - Region 1 - NRPS

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Location: 13,330 - 45,473 nt. (total: 32,144 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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NRPS/PKS domains

NRPS/PKS modules

Detailed domain annotation

Selected features only

Show module domains

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 13329 - 45473:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (ser)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6012768_MAG_00000005-scaffold_4_26

Search NORINE for peptide: strict or relaxed

AMP-binding (492..889): ser

NRPSPredictor2: ser

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: ser, thr, dhpg, hpg
Small clusters prediction:: ser
Single AA prediction:: ser

Stachelhaus prediction details:

Stachelhaus sequence:: DVWHISLIDK
Nearest Stachelhaus code:: ser
Stachelhaus code match:: 100% (strong)

TARA_SAMEA6012768_MAG_00000005-scaffold_23 - Region 1 - CDPS

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Location: 6,165 - 27,325 nt. (total: 21,161 nt) Show pHMM detection rules used

CDPS: (CDPS or cycdipepsynth)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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TARA_SAMEA6012768_MAG_00000005-scaffold_26 - Region 1 - terpene

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Location: 14,950 - 27,097 nt. (total: 12,148 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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TARA_SAMEA6012768_MAG_00000005-scaffold_28 - Region 1 - hglE-KS

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Location: 1 - 26,861 nt. (total: 26,861 nt) Show pHMM detection rules used

Region on contig edge.

hglE-KS: (hglE or hglD)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

NRPS/PKS modules

Detailed domain annotation

Selected features only

Show module domains

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 26861:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (mal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6012768_MAG_00000005-scaffold_28_2

PKS_AT (587..895): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 70.8%; inactive: 66.7%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 78.8
Methoxymalonyl-CoA: 31.2
Methylmalonyl-CoA: 25.2
inactive: 20.7
CHC-CoA: 17.6
trans-1,2-CPDA: 0.0
fatty_acid: 0.0
Propionyl-CoA: 0.0
Isobutyryl-CoA: 0.0
Ethylmalonyl-CoA: 0.0
Benzoyl-CoA: 0.0
Acetyl-CoA: 0.0
3-Methylbutyryl-CoA: 0.0
2-Methylbutyryl-CoA: 0.0

TARA_SAMEA6012768_MAG_00000005-scaffold_28_4

PKS_AT (1235..1385): pk

ATSignature: (unknown)

No matches above 50%

minowa: trans-1,2-CPDA

Prediction, score:

trans-1,2-CPDA: 0.0
inactive: 0.0
fatty_acid: 0.0
Propionyl-CoA: 0.0
Methylmalonyl-CoA: 0.0
Methoxymalonyl-CoA: 0.0
Malonyl-CoA: 0.0
Isobutyryl-CoA: 0.0
Ethylmalonyl-CoA: 0.0
CHC-CoA: 0.0
Benzoyl-CoA: 0.0
Acetyl-CoA: 0.0
3-Methylbutyryl-CoA: 0.0
2-Methylbutyryl-CoA: 0.0

TARA_SAMEA6012768_MAG_00000005-scaffold_49 - Region 1 - T1PKS

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Location: 1 - 22,374 nt. (total: 22,374 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

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NRPS/PKS domains

NRPS/PKS modules

Detailed domain annotation

Selected features only

Show module domains

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 22374:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (ohmal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6012768_MAG_00000005-scaffold_49_1

PKS_AT (395..686): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 100.0%; inactive: 95.8%; 2-Rhyd-Malonyl-CoA: 54.2%

minowa: inactive

Prediction, score:

inactive: 189.9
Malonyl-CoA: 182.4
Methoxymalonyl-CoA: 66.8
Methylmalonyl-CoA: 55.5
Isobutyryl-CoA: 37.2
Benzoyl-CoA: 31.2
Propionyl-CoA: 29.6
Ethylmalonyl-CoA: 18.9
Acetyl-CoA: 15.7
2-Methylbutyryl-CoA: 10.6
CHC-CoA: 10.4
trans-1,2-CPDA: 0.0
fatty_acid: 0.0
3-Methylbutyryl-CoA: 0.0

TARA_SAMEA6012768_MAG_00000005-scaffold_50 - Region 1 - proteusin

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Location: 1,804 - 22,241 nt. (total: 20,438 nt) Show pHMM detection rules used

Region on contig edge.

proteusin: (PoyD or TIGR03793)

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TARA_SAMEA6012768_MAG_00000005-scaffold_82 - Region 1 - terpene

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Location: 1,697 - 17,749 nt. (total: 16,053 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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TARA_SAMEA6012768_MAG_00000005-scaffold_111 - Region 1 - lanthipeptide-class-ii

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Location: 1 - 13,758 nt. (total: 13,758 nt) Show pHMM detection rules used

Region on contig edge.

lanthipeptide-class-ii: cds(LANC_like and DUF4135)

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Lanthipeptides

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Lanthipeptides

Core peptide predictions

No core peptides found.

TARA_SAMEA6012768_MAG_00000005-scaffold_133 - Region 1 - terpene

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Location: 1 - 11,842 nt. (total: 11,842 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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TARA_SAMEA6012768_MAG_00000005-scaffold_141 - Region 1 - T3PKS

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Location: 1 - 11,473 nt. (total: 11,473 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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TARA_SAMEA6012768_MAG_00000005-scaffold_154 - Region 1 - NRPS

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Location: 1 - 10,702 nt. (total: 10,702 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

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NRPS/PKS domains

NRPS/PKS modules

Detailed domain annotation

Selected features only

Show module domains

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 10702:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (asn)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6012768_MAG_00000005-scaffold_154_2

Search NORINE for peptide: strict or relaxed

AMP-binding (470..872): asn

NRPSPredictor2: asn

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: asp, asn
Single AA prediction:: asn

Stachelhaus prediction details:

Stachelhaus sequence:: DaTKIGEVGK
Nearest Stachelhaus code:: asn
Stachelhaus code match:: 90% (moderate)

TARA_SAMEA6012768_MAG_00000005-scaffold_181 - Region 1 - RRE-containing

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Location: 1 - 9,075 nt. (total: 9,075 nt) Show pHMM detection rules used

Region on contig edge.

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

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