TARA_SAMEA6012759_MAG_00000033 - 11 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

TARA_SAMEA6012759_MAG_00000033-scaffold_2

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	proteusin	36,011	50,306

TARA_SAMEA6012759_MAG_00000033-scaffold_11

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	siderophore	14,091	30,986

TARA_SAMEA6012759_MAG_00000033-scaffold_20

Region	Type	From	To	Most similar known cluster		Similarity
Region 20.1	NRPS	1	25,866

TARA_SAMEA6012759_MAG_00000033-scaffold_28

Region	Type	From	To	Most similar known cluster		Similarity
Region 28.1	terpene	5,519	21,584

TARA_SAMEA6012759_MAG_00000033-scaffold_33

Region	Type	From	To	Most similar known cluster		Similarity
Region 33.1	T1PKS,NRPS-like	1	20,890

TARA_SAMEA6012759_MAG_00000033-scaffold_36

Region	Type	From	To	Most similar known cluster		Similarity
Region 36.1	T3PKS	1	19,639

TARA_SAMEA6012759_MAG_00000033-scaffold_37

Region	Type	From	To	Most similar known cluster		Similarity
Region 37.1	terpene	1	19,495

TARA_SAMEA6012759_MAG_00000033-scaffold_53

Region	Type	From	To	Most similar known cluster		Similarity
Region 53.1	NRPS,T1PKS	1	17,292

TARA_SAMEA6012759_MAG_00000033-scaffold_65

Region	Type	From	To	Most similar known cluster		Similarity
Region 65.1	terpene	1	15,423

TARA_SAMEA6012759_MAG_00000033-scaffold_70

Region	Type	From	To	Most similar known cluster		Similarity
Region 70.1	lanthipeptide-class-ii	1	16,266

TARA_SAMEA6012759_MAG_00000033-scaffold_286

Region	Type	From	To	Most similar known cluster		Similarity
Region 286.1	CDPS	1	5,501

Region	Type	From	To	Similarity
Region 2.1	proteusin	36,011	50,306
Region 11.1	siderophore	14,091	30,986
Region 20.1	NRPS	1	25,866
Region 28.1	terpene	5,519	21,584
Region 33.1	T1PKS,NRPS-like	1	20,890
Region 36.1	T3PKS	1	19,639
Region 37.1	terpene	1	19,495
Region 53.1	NRPS,T1PKS	1	17,292
Region 65.1	terpene	1	15,423
Region 70.1	lanthipeptide-class-ii	1	16,266
Region 286.1	CDPS	1	5,501

No secondary metabolite regions were found in these records:: TARA_SAMEA6012759_MAG_00000033-scaffold_1; TARA_SAMEA6012759_MAG_00000033-scaffold_3; TARA_SAMEA6012759_MAG_00000033-scaffold_4; TARA_SAMEA6012759_MAG_00000033-scaffold_5; TARA_SAMEA6012759_MAG_00000033-scaffold_6; TARA_SAMEA6012759_MAG_00000033-scaffold_7; TARA_SAMEA6012759_MAG_00000033-scaffold_8; TARA_SAMEA6012759_MAG_00000033-scaffold_9; TARA_SAMEA6012759_MAG_00000033-scaffold_10; TARA_SAMEA6012759_MAG_00000033-scaffold_12; TARA_SAMEA6012759_MAG_00000033-scaffold_13; TARA_SAMEA6012759_MAG_00000033-scaffold_14; TARA_SAMEA6012759_MAG_00000033-scaffold_15; TARA_SAMEA6012759_MAG_00000033-scaffold_16; TARA_SAMEA6012759_MAG_00000033-scaffold_17; TARA_SAMEA6012759_MAG_00000033-scaffold_18; TARA_SAMEA6012759_MAG_00000033-scaffold_19; TARA_SAMEA6012759_MAG_00000033-scaffold_21; TARA_SAMEA6012759_MAG_00000033-scaffold_22; TARA_SAMEA6012759_MAG_00000033-scaffold_23; TARA_SAMEA6012759_MAG_00000033-scaffold_24; TARA_SAMEA6012759_MAG_00000033-scaffold_25; TARA_SAMEA6012759_MAG_00000033-scaffold_26; TARA_SAMEA6012759_MAG_00000033-scaffold_27; TARA_SAMEA6012759_MAG_00000033-scaffold_29; TARA_SAMEA6012759_MAG_00000033-scaffold_30; TARA_SAMEA6012759_MAG_00000033-scaffold_31; TARA_SAMEA6012759_MAG_00000033-scaffold_32; TARA_SAMEA6012759_MAG_00000033-scaffold_34; TARA_SAMEA6012759_MAG_00000033-scaffold_35; TARA_SAMEA6012759_MAG_00000033-scaffold_38; TARA_SAMEA6012759_MAG_00000033-scaffold_39; TARA_SAMEA6012759_MAG_00000033-scaffold_40; TARA_SAMEA6012759_MAG_00000033-scaffold_41; TARA_SAMEA6012759_MAG_00000033-scaffold_42; TARA_SAMEA6012759_MAG_00000033-scaffold_43; TARA_SAMEA6012759_MAG_00000033-scaffold_44; TARA_SAMEA6012759_MAG_00000033-scaffold_45; TARA_SAMEA6012759_MAG_00000033-scaffold_46; TARA_SAMEA6012759_MAG_00000033-scaffold_47; TARA_SAMEA6012759_MAG_00000033-scaffold_48; TARA_SAMEA6012759_MAG_00000033-scaffold_49; TARA_SAMEA6012759_MAG_00000033-scaffold_50; TARA_SAMEA6012759_MAG_00000033-scaffold_51; TARA_SAMEA6012759_MAG_00000033-scaffold_52; TARA_SAMEA6012759_MAG_00000033-scaffold_54; TARA_SAMEA6012759_MAG_00000033-scaffold_55; TARA_SAMEA6012759_MAG_00000033-scaffold_56; TARA_SAMEA6012759_MAG_00000033-scaffold_57; TARA_SAMEA6012759_MAG_00000033-scaffold_58; TARA_SAMEA6012759_MAG_00000033-scaffold_59; TARA_SAMEA6012759_MAG_00000033-scaffold_60; TARA_SAMEA6012759_MAG_00000033-scaffold_61; TARA_SAMEA6012759_MAG_00000033-scaffold_62; TARA_SAMEA6012759_MAG_00000033-scaffold_63; TARA_SAMEA6012759_MAG_00000033-scaffold_64; TARA_SAMEA6012759_MAG_00000033-scaffold_66; TARA_SAMEA6012759_MAG_00000033-scaffold_67; TARA_SAMEA6012759_MAG_00000033-scaffold_68; TARA_SAMEA6012759_MAG_00000033-scaffold_69; TARA_SAMEA6012759_MAG_00000033-scaffold_71; TARA_SAMEA6012759_MAG_00000033-scaffold_72; TARA_SAMEA6012759_MAG_00000033-scaffold_73; TARA_SAMEA6012759_MAG_00000033-scaffold_74; TARA_SAMEA6012759_MAG_00000033-scaffold_75; TARA_SAMEA6012759_MAG_00000033-scaffold_76; TARA_SAMEA6012759_MAG_00000033-scaffold_77; TARA_SAMEA6012759_MAG_00000033-scaffold_78; TARA_SAMEA6012759_MAG_00000033-scaffold_79; TARA_SAMEA6012759_MAG_00000033-scaffold_80; TARA_SAMEA6012759_MAG_00000033-scaffold_81; TARA_SAMEA6012759_MAG_00000033-scaffold_82; TARA_SAMEA6012759_MAG_00000033-scaffold_83; TARA_SAMEA6012759_MAG_00000033-scaffold_84; TARA_SAMEA6012759_MAG_00000033-scaffold_85; TARA_SAMEA6012759_MAG_00000033-scaffold_86; TARA_SAMEA6012759_MAG_00000033-scaffold_87; TARA_SAMEA6012759_MAG_00000033-scaffold_88; TARA_SAMEA6012759_MAG_00000033-scaffold_89; TARA_SAMEA6012759_MAG_00000033-scaffold_90; TARA_SAMEA6012759_MAG_00000033-scaffold_91; TARA_SAMEA6012759_MAG_00000033-scaffold_92; TARA_SAMEA6012759_MAG_00000033-scaffold_93; TARA_SAMEA6012759_MAG_00000033-scaffold_94; TARA_SAMEA6012759_MAG_00000033-scaffold_95; TARA_SAMEA6012759_MAG_00000033-scaffold_96; TARA_SAMEA6012759_MAG_00000033-scaffold_97; TARA_SAMEA6012759_MAG_00000033-scaffold_98; TARA_SAMEA6012759_MAG_00000033-scaffold_99; TARA_SAMEA6012759_MAG_00000033-scaffold_100; TARA_SAMEA6012759_MAG_00000033-scaffold_101; TARA_SAMEA6012759_MAG_00000033-scaffold_102; TARA_SAMEA6012759_MAG_00000033-scaffold_103; TARA_SAMEA6012759_MAG_00000033-scaffold_104; TARA_SAMEA6012759_MAG_00000033-scaffold_105; TARA_SAMEA6012759_MAG_00000033-scaffold_106; TARA_SAMEA6012759_MAG_00000033-scaffold_107; TARA_SAMEA6012759_MAG_00000033-scaffold_108; TARA_SAMEA6012759_MAG_00000033-scaffold_109; TARA_SAMEA6012759_MAG_00000033-scaffold_110; TARA_SAMEA6012759_MAG_00000033-scaffold_111; TARA_SAMEA6012759_MAG_00000033-scaffold_112; TARA_SAMEA6012759_MAG_00000033-scaffold_113; TARA_SAMEA6012759_MAG_00000033-scaffold_114; TARA_SAMEA6012759_MAG_00000033-scaffold_115; TARA_SAMEA6012759_MAG_00000033-scaffold_116; TARA_SAMEA6012759_MAG_00000033-scaffold_117; TARA_SAMEA6012759_MAG_00000033-scaffold_118; TARA_SAMEA6012759_MAG_00000033-scaffold_119; TARA_SAMEA6012759_MAG_00000033-scaffold_120; TARA_SAMEA6012759_MAG_00000033-scaffold_121; TARA_SAMEA6012759_MAG_00000033-scaffold_122; TARA_SAMEA6012759_MAG_00000033-scaffold_123; TARA_SAMEA6012759_MAG_00000033-scaffold_124; TARA_SAMEA6012759_MAG_00000033-scaffold_125; TARA_SAMEA6012759_MAG_00000033-scaffold_126; TARA_SAMEA6012759_MAG_00000033-scaffold_127; TARA_SAMEA6012759_MAG_00000033-scaffold_128; TARA_SAMEA6012759_MAG_00000033-scaffold_129; TARA_SAMEA6012759_MAG_00000033-scaffold_130; TARA_SAMEA6012759_MAG_00000033-scaffold_131; TARA_SAMEA6012759_MAG_00000033-scaffold_132; TARA_SAMEA6012759_MAG_00000033-scaffold_133; TARA_SAMEA6012759_MAG_00000033-scaffold_134; TARA_SAMEA6012759_MAG_00000033-scaffold_135; TARA_SAMEA6012759_MAG_00000033-scaffold_136; TARA_SAMEA6012759_MAG_00000033-scaffold_137; TARA_SAMEA6012759_MAG_00000033-scaffold_138; TARA_SAMEA6012759_MAG_00000033-scaffold_139; TARA_SAMEA6012759_MAG_00000033-scaffold_140; TARA_SAMEA6012759_MAG_00000033-scaffold_141; TARA_SAMEA6012759_MAG_00000033-scaffold_142; TARA_SAMEA6012759_MAG_00000033-scaffold_143; TARA_SAMEA6012759_MAG_00000033-scaffold_144; TARA_SAMEA6012759_MAG_00000033-scaffold_145; TARA_SAMEA6012759_MAG_00000033-scaffold_146; TARA_SAMEA6012759_MAG_00000033-scaffold_147; TARA_SAMEA6012759_MAG_00000033-scaffold_148; TARA_SAMEA6012759_MAG_00000033-scaffold_149; TARA_SAMEA6012759_MAG_00000033-scaffold_150; TARA_SAMEA6012759_MAG_00000033-scaffold_151; TARA_SAMEA6012759_MAG_00000033-scaffold_152; TARA_SAMEA6012759_MAG_00000033-scaffold_153; TARA_SAMEA6012759_MAG_00000033-scaffold_154; TARA_SAMEA6012759_MAG_00000033-scaffold_155; TARA_SAMEA6012759_MAG_00000033-scaffold_156; TARA_SAMEA6012759_MAG_00000033-scaffold_157; TARA_SAMEA6012759_MAG_00000033-scaffold_158; TARA_SAMEA6012759_MAG_00000033-scaffold_159; TARA_SAMEA6012759_MAG_00000033-scaffold_160; TARA_SAMEA6012759_MAG_00000033-scaffold_161; TARA_SAMEA6012759_MAG_00000033-scaffold_162; TARA_SAMEA6012759_MAG_00000033-scaffold_163; TARA_SAMEA6012759_MAG_00000033-scaffold_164; TARA_SAMEA6012759_MAG_00000033-scaffold_165; TARA_SAMEA6012759_MAG_00000033-scaffold_166; TARA_SAMEA6012759_MAG_00000033-scaffold_167; TARA_SAMEA6012759_MAG_00000033-scaffold_168; TARA_SAMEA6012759_MAG_00000033-scaffold_169; TARA_SAMEA6012759_MAG_00000033-scaffold_170; TARA_SAMEA6012759_MAG_00000033-scaffold_171; TARA_SAMEA6012759_MAG_00000033-scaffold_172; TARA_SAMEA6012759_MAG_00000033-scaffold_173; TARA_SAMEA6012759_MAG_00000033-scaffold_174; TARA_SAMEA6012759_MAG_00000033-scaffold_175; TARA_SAMEA6012759_MAG_00000033-scaffold_176; TARA_SAMEA6012759_MAG_00000033-scaffold_177; TARA_SAMEA6012759_MAG_00000033-scaffold_178; TARA_SAMEA6012759_MAG_00000033-scaffold_179; TARA_SAMEA6012759_MAG_00000033-scaffold_180; TARA_SAMEA6012759_MAG_00000033-scaffold_181; TARA_SAMEA6012759_MAG_00000033-scaffold_182; TARA_SAMEA6012759_MAG_00000033-scaffold_183; TARA_SAMEA6012759_MAG_00000033-scaffold_184; TARA_SAMEA6012759_MAG_00000033-scaffold_185; TARA_SAMEA6012759_MAG_00000033-scaffold_186; TARA_SAMEA6012759_MAG_00000033-scaffold_187; TARA_SAMEA6012759_MAG_00000033-scaffold_188; TARA_SAMEA6012759_MAG_00000033-scaffold_189; TARA_SAMEA6012759_MAG_00000033-scaffold_190; TARA_SAMEA6012759_MAG_00000033-scaffold_191; TARA_SAMEA6012759_MAG_00000033-scaffold_192; TARA_SAMEA6012759_MAG_00000033-scaffold_193; TARA_SAMEA6012759_MAG_00000033-scaffold_194; TARA_SAMEA6012759_MAG_00000033-scaffold_195; TARA_SAMEA6012759_MAG_00000033-scaffold_196; TARA_SAMEA6012759_MAG_00000033-scaffold_197; TARA_SAMEA6012759_MAG_00000033-scaffold_198; TARA_SAMEA6012759_MAG_00000033-scaffold_199; TARA_SAMEA6012759_MAG_00000033-scaffold_200; TARA_SAMEA6012759_MAG_00000033-scaffold_201; TARA_SAMEA6012759_MAG_00000033-scaffold_202; TARA_SAMEA6012759_MAG_00000033-scaffold_203; TARA_SAMEA6012759_MAG_00000033-scaffold_204; TARA_SAMEA6012759_MAG_00000033-scaffold_205; TARA_SAMEA6012759_MAG_00000033-scaffold_206; TARA_SAMEA6012759_MAG_00000033-scaffold_207; TARA_SAMEA6012759_MAG_00000033-scaffold_208; TARA_SAMEA6012759_MAG_00000033-scaffold_209; TARA_SAMEA6012759_MAG_00000033-scaffold_210; TARA_SAMEA6012759_MAG_00000033-scaffold_211; TARA_SAMEA6012759_MAG_00000033-scaffold_212; TARA_SAMEA6012759_MAG_00000033-scaffold_213; TARA_SAMEA6012759_MAG_00000033-scaffold_214; TARA_SAMEA6012759_MAG_00000033-scaffold_215; TARA_SAMEA6012759_MAG_00000033-scaffold_216; TARA_SAMEA6012759_MAG_00000033-scaffold_217; TARA_SAMEA6012759_MAG_00000033-scaffold_218; TARA_SAMEA6012759_MAG_00000033-scaffold_219; TARA_SAMEA6012759_MAG_00000033-scaffold_220; TARA_SAMEA6012759_MAG_00000033-scaffold_221; TARA_SAMEA6012759_MAG_00000033-scaffold_222; TARA_SAMEA6012759_MAG_00000033-scaffold_223; TARA_SAMEA6012759_MAG_00000033-scaffold_224; TARA_SAMEA6012759_MAG_00000033-scaffold_225; TARA_SAMEA6012759_MAG_00000033-scaffold_226; TARA_SAMEA6012759_MAG_00000033-scaffold_227; TARA_SAMEA6012759_MAG_00000033-scaffold_228; TARA_SAMEA6012759_MAG_00000033-scaffold_229; TARA_SAMEA6012759_MAG_00000033-scaffold_230; TARA_SAMEA6012759_MAG_00000033-scaffold_231; TARA_SAMEA6012759_MAG_00000033-scaffold_232; TARA_SAMEA6012759_MAG_00000033-scaffold_233; TARA_SAMEA6012759_MAG_00000033-scaffold_234; TARA_SAMEA6012759_MAG_00000033-scaffold_235; TARA_SAMEA6012759_MAG_00000033-scaffold_236; TARA_SAMEA6012759_MAG_00000033-scaffold_237; TARA_SAMEA6012759_MAG_00000033-scaffold_238; TARA_SAMEA6012759_MAG_00000033-scaffold_239; TARA_SAMEA6012759_MAG_00000033-scaffold_240; TARA_SAMEA6012759_MAG_00000033-scaffold_241; TARA_SAMEA6012759_MAG_00000033-scaffold_242; TARA_SAMEA6012759_MAG_00000033-scaffold_243; TARA_SAMEA6012759_MAG_00000033-scaffold_244; TARA_SAMEA6012759_MAG_00000033-scaffold_245; TARA_SAMEA6012759_MAG_00000033-scaffold_246; TARA_SAMEA6012759_MAG_00000033-scaffold_247; TARA_SAMEA6012759_MAG_00000033-scaffold_248; TARA_SAMEA6012759_MAG_00000033-scaffold_249; TARA_SAMEA6012759_MAG_00000033-scaffold_250; TARA_SAMEA6012759_MAG_00000033-scaffold_251; TARA_SAMEA6012759_MAG_00000033-scaffold_252; TARA_SAMEA6012759_MAG_00000033-scaffold_253; TARA_SAMEA6012759_MAG_00000033-scaffold_254; TARA_SAMEA6012759_MAG_00000033-scaffold_255; TARA_SAMEA6012759_MAG_00000033-scaffold_256; TARA_SAMEA6012759_MAG_00000033-scaffold_257; TARA_SAMEA6012759_MAG_00000033-scaffold_258; TARA_SAMEA6012759_MAG_00000033-scaffold_259; TARA_SAMEA6012759_MAG_00000033-scaffold_260; TARA_SAMEA6012759_MAG_00000033-scaffold_261; TARA_SAMEA6012759_MAG_00000033-scaffold_262; TARA_SAMEA6012759_MAG_00000033-scaffold_263; TARA_SAMEA6012759_MAG_00000033-scaffold_264; TARA_SAMEA6012759_MAG_00000033-scaffold_265; TARA_SAMEA6012759_MAG_00000033-scaffold_266; TARA_SAMEA6012759_MAG_00000033-scaffold_267; TARA_SAMEA6012759_MAG_00000033-scaffold_268; TARA_SAMEA6012759_MAG_00000033-scaffold_269; TARA_SAMEA6012759_MAG_00000033-scaffold_270; TARA_SAMEA6012759_MAG_00000033-scaffold_271; TARA_SAMEA6012759_MAG_00000033-scaffold_272; TARA_SAMEA6012759_MAG_00000033-scaffold_273; TARA_SAMEA6012759_MAG_00000033-scaffold_274; TARA_SAMEA6012759_MAG_00000033-scaffold_275; TARA_SAMEA6012759_MAG_00000033-scaffold_276; TARA_SAMEA6012759_MAG_00000033-scaffold_277; TARA_SAMEA6012759_MAG_00000033-scaffold_278; TARA_SAMEA6012759_MAG_00000033-scaffold_279; TARA_SAMEA6012759_MAG_00000033-scaffold_280; TARA_SAMEA6012759_MAG_00000033-scaffold_281; TARA_SAMEA6012759_MAG_00000033-scaffold_282; TARA_SAMEA6012759_MAG_00000033-scaffold_283; TARA_SAMEA6012759_MAG_00000033-scaffold_284; TARA_SAMEA6012759_MAG_00000033-scaffold_285; TARA_SAMEA6012759_MAG_00000033-scaffold_287; TARA_SAMEA6012759_MAG_00000033-scaffold_288; TARA_SAMEA6012759_MAG_00000033-scaffold_289; TARA_SAMEA6012759_MAG_00000033-scaffold_290; TARA_SAMEA6012759_MAG_00000033-scaffold_291; TARA_SAMEA6012759_MAG_00000033-scaffold_292; TARA_SAMEA6012759_MAG_00000033-scaffold_293; TARA_SAMEA6012759_MAG_00000033-scaffold_294; TARA_SAMEA6012759_MAG_00000033-scaffold_295; TARA_SAMEA6012759_MAG_00000033-scaffold_296; TARA_SAMEA6012759_MAG_00000033-scaffold_297; TARA_SAMEA6012759_MAG_00000033-scaffold_298; TARA_SAMEA6012759_MAG_00000033-scaffold_299; TARA_SAMEA6012759_MAG_00000033-scaffold_300; TARA_SAMEA6012759_MAG_00000033-scaffold_301; TARA_SAMEA6012759_MAG_00000033-scaffold_302; TARA_SAMEA6012759_MAG_00000033-scaffold_303; TARA_SAMEA6012759_MAG_00000033-scaffold_304; TARA_SAMEA6012759_MAG_00000033-scaffold_305; TARA_SAMEA6012759_MAG_00000033-scaffold_306

Compact view

TARA_SAMEA6012759_MAG_00000033-scaffold_2 - Region 1 - proteusin

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Location: 36,011 - 50,306 nt. (total: 14,296 nt) Show pHMM detection rules used

Region on contig edge.

proteusin: (PoyD or TIGR03793)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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TARA_SAMEA6012759_MAG_00000033-scaffold_11 - Region 1 - siderophore

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Location: 14,091 - 30,986 nt. (total: 16,896 nt) Show pHMM detection rules used

siderophore: IucA_IucC

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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TARA_SAMEA6012759_MAG_00000033-scaffold_20 - Region 1 - NRPS

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Location: 1 - 25,866 nt. (total: 25,866 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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NRPS/PKS domains

NRPS/PKS modules

Detailed domain annotation

Selected features only

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Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 25866:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (ser)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6012759_MAG_00000033-scaffold_20_6

Search NORINE for peptide: strict or relaxed

AMP-binding (492..889): ser

NRPSPredictor2: ser

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: ser, thr, dhpg, hpg
Small clusters prediction:: ser
Single AA prediction:: ser

Stachelhaus prediction details:

Stachelhaus sequence:: DVWHISLIDK
Nearest Stachelhaus code:: ser
Stachelhaus code match:: 100% (strong)

TARA_SAMEA6012759_MAG_00000033-scaffold_28 - Region 1 - terpene

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Location: 5,519 - 21,584 nt. (total: 16,066 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

TARA_SAMEA6012759_MAG_00000033-scaffold_33 - Region 1 - NRPS-like,T1PKS

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Location: 1 - 20,890 nt. (total: 20,890 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))
NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

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NRPS/PKS domains

NRPS/PKS modules

Detailed domain annotation

Selected features only

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NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 20890:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (ohmal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6012759_MAG_00000033-scaffold_33_9

CAL_domain (38..479): pk

minowa: NH2

Prediction, score:

NH2: 28.7
fatty_acid: 17.2
AHBA: 4.0
Acetyl-CoA: 3.7
shikimic_acid: 0.0

PKS_AT (1204..1495): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 100.0%; inactive: 95.8%; 2-Rhyd-Malonyl-CoA: 54.2%

minowa: inactive

Prediction, score:

inactive: 189.9
Malonyl-CoA: 182.4
Methoxymalonyl-CoA: 66.8
Methylmalonyl-CoA: 55.5
Isobutyryl-CoA: 37.2
Benzoyl-CoA: 31.2
Propionyl-CoA: 29.6
Ethylmalonyl-CoA: 18.9
Acetyl-CoA: 15.7
2-Methylbutyryl-CoA: 10.6
CHC-CoA: 10.4
trans-1,2-CPDA: 0.0
fatty_acid: 0.0
3-Methylbutyryl-CoA: 0.0

TARA_SAMEA6012759_MAG_00000033-scaffold_36 - Region 1 - T3PKS

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Location: 1 - 19,639 nt. (total: 19,639 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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TARA_SAMEA6012759_MAG_00000033-scaffold_37 - Region 1 - terpene

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Location: 1 - 19,495 nt. (total: 19,495 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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TARA_SAMEA6012759_MAG_00000033-scaffold_53 - Region 1 - NRPS,T1PKS

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Location: 1 - 17,292 nt. (total: 17,292 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))
T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

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NRPS/PKS domains

NRPS/PKS modules

Detailed domain annotation

Selected features only

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NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 17292:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (mal - D-X) + (asn)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

TARA_SAMEA6012759_MAG_00000033-scaffold_53_5

Search NORINE for peptide: strict or relaxed

AMP-binding (470..872): asn

NRPSPredictor2: asn

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: asp, asn
Single AA prediction:: asn

Stachelhaus prediction details:

Stachelhaus sequence:: DaTKIGEVGK
Nearest Stachelhaus code:: asn
Stachelhaus code match:: 90% (moderate)

TARA_SAMEA6012759_MAG_00000033-scaffold_53_6

Search NORINE for peptide: strict or relaxed

PKS_AT (204..503): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 91.7%; inactive: 87.5%; 2-Rhyd-Malonyl-CoA: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 163.4
inactive: 134.4
Methylmalonyl-CoA: 45.9
Methoxymalonyl-CoA: 43.9
Isobutyryl-CoA: 37.9
Propionyl-CoA: 32.1
Acetyl-CoA: 19.7
Benzoyl-CoA: 15.8
2-Methylbutyryl-CoA: 12.4
CHC-CoA: 11.5
trans-1,2-CPDA: 0.0
fatty_acid: 0.0
Ethylmalonyl-CoA: 0.0
3-Methylbutyryl-CoA: 0.0

AMP-binding (1717..2125): X

NRPSPredictor2: orn, lys, arg

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: orn, lys, arg
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DvENiGaItK
Nearest Stachelhaus code:: orn
Stachelhaus code match:: 60% (weak)

TARA_SAMEA6012759_MAG_00000033-scaffold_65 - Region 1 - terpene

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Location: 1 - 15,423 nt. (total: 15,423 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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TARA_SAMEA6012759_MAG_00000033-scaffold_70 - Region 1 - lanthipeptide-class-ii

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Location: 1 - 16,266 nt. (total: 16,266 nt) Show pHMM detection rules used

Region on contig edge.

lanthipeptide-class-ii: cds(LANC_like and DUF4135)

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Lanthipeptides

Lanthipeptide predictions

Lanthipeptide(s) for TARA_SAMEA6012759_MAG_00000033-scaffold_70_3 - Putative Class II

TARA_SAMEA6012759_MAG_00000033-scaffold_70_8 leader / core peptide: MKKVLSGLFFVFVPAILGTSNSA - IAFEKCDhaIKDFDhaYDhbEDhbNEKNLDhbLNYQDhbDhbQDhaLQDhaAFKDhaLKDhaRL
allorf_16142_16255 leader / core peptide: LFKFVRKNWLELPNFNCQSTDRFIAFA - LYDhbCDhaHDVLV

Legend:

Dha: Didehydroalanine
Dhb: Didehydrobutyrine

Lanthipeptides

Core peptide predictions

TARA_SAMEA6012759_MAG_00000033-scaffold_70_8 - Class II

Cleavage pHMM score: -5.20

RODEO score: 0

Monoisotopic mass: 4676.5 Da

Molecular weight: 4679.2 Da

Number of bridges: 1

Alternative weights: (assuming N unmodified Ser/Thr residues); 4697.2 Da N = 1; 4715.3 Da N = 2; 4733.3 Da N = 3; 4751.3 Da N = 4; 4769.3 Da N = 5; 4787.3 Da N = 6; 4805.4 Da N = 7; 4823.4 Da N = 8; 4841.4 Da N = 9; 4859.4 Da N = 10

allorf_16142_16255 - Class II

Cleavage pHMM score: -5.90

RODEO score: 0

Monoisotopic mass: 1112.6 Da

Molecular weight: 1113.3 Da

Number of bridges: 1

Alternative weights: (assuming N unmodified Ser/Thr residues); 1131.3 Da N = 1

TARA_SAMEA6012759_MAG_00000033-scaffold_286 - Region 1 - CDPS

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Location: 1 - 5,501 nt. (total: 5,501 nt) Show pHMM detection rules used

Region on contig edge.

CDPS: (CDPS or cycdipepsynth)

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