CARD22-1_SAMN24292805_MAG_00000003 - 18 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

CARD22-1_SAMN24292805_MAG_00000003-scaffold_2

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	thioamitides	64,143	84,859

CARD22-1_SAMN24292805_MAG_00000003-scaffold_17

Region	Type	From	To	Most similar known cluster		Similarity
Region 17.1	terpene	1	16,214

CARD22-1_SAMN24292805_MAG_00000003-scaffold_18

Region	Type	From	To	Most similar known cluster		Similarity
Region 18.1	arylpolyene	1	24,991

CARD22-1_SAMN24292805_MAG_00000003-scaffold_23

Region	Type	From	To	Most similar known cluster		Similarity
Region 23.1	T3PKS	1	34,554

CARD22-1_SAMN24292805_MAG_00000003-scaffold_27

Region	Type	From	To	Most similar known cluster		Similarity
Region 27.1	phosphonate	7,888	46,477

CARD22-1_SAMN24292805_MAG_00000003-scaffold_41

Region	Type	From	To	Most similar known cluster		Similarity
Region 41.1	siderophore	1	15,122
Region 41.2	phosphonate	17,878	40,801

CARD22-1_SAMN24292805_MAG_00000003-scaffold_49

Region	Type	From	To	Most similar known cluster		Similarity
Region 49.1	NRPS,T1PKS	1	37,785

CARD22-1_SAMN24292805_MAG_00000003-scaffold_55

Region	Type	From	To	Most similar known cluster		Similarity
Region 55.1	ranthipeptide	866	22,295

CARD22-1_SAMN24292805_MAG_00000003-scaffold_62

Region	Type	From	To	Most similar known cluster		Similarity
Region 62.1	hserlactone	1	17,424

CARD22-1_SAMN24292805_MAG_00000003-scaffold_92

Region	Type	From	To	Most similar known cluster		Similarity
Region 92.1	phosphonate	121	24,667

CARD22-1_SAMN24292805_MAG_00000003-scaffold_97

Region	Type	From	To	Most similar known cluster		Similarity
Region 97.1	RiPP-like	1	7,715

CARD22-1_SAMN24292805_MAG_00000003-scaffold_119

Region	Type	From	To	Most similar known cluster		Similarity
Region 119.1	NRPS	1	19,328

CARD22-1_SAMN24292805_MAG_00000003-scaffold_120

Region	Type	From	To	Most similar known cluster		Similarity
Region 120.1	NRPS	1	19,264

CARD22-1_SAMN24292805_MAG_00000003-scaffold_121

Region	Type	From	To	Most similar known cluster		Similarity
Region 121.1	phosphonate	1	19,074

CARD22-1_SAMN24292805_MAG_00000003-scaffold_132

Region	Type	From	To	Most similar known cluster		Similarity
Region 132.1	NRPS-like	1	17,641

CARD22-1_SAMN24292805_MAG_00000003-scaffold_172

Region	Type	From	To	Most similar known cluster		Similarity
Region 172.1	terpene	1	13,006

CARD22-1_SAMN24292805_MAG_00000003-scaffold_178

Region	Type	From	To	Most similar known cluster		Similarity
Region 178.1	resorcinol	1	11,573

Region	Type	From	To	Similarity
Region 2.1	thioamitides	64,143	84,859
Region 17.1	terpene	1	16,214
Region 18.1	arylpolyene	1	24,991
Region 23.1	T3PKS	1	34,554
Region 27.1	phosphonate	7,888	46,477
Region 41.1	siderophore	1	15,122
Region 41.2	phosphonate	17,878	40,801
Region 49.1	NRPS,T1PKS	1	37,785
Region 55.1	ranthipeptide	866	22,295
Region 62.1	hserlactone	1	17,424
Region 92.1	phosphonate	121	24,667
Region 97.1	RiPP-like	1	7,715
Region 119.1	NRPS	1	19,328
Region 120.1	NRPS	1	19,264
Region 121.1	phosphonate	1	19,074
Region 132.1	NRPS-like	1	17,641
Region 172.1	terpene	1	13,006
Region 178.1	resorcinol	1	11,573

No secondary metabolite regions were found in these records:: CARD22-1_SAMN24292805_MAG_00000003-scaffold_1; CARD22-1_SAMN24292805_MAG_00000003-scaffold_3; CARD22-1_SAMN24292805_MAG_00000003-scaffold_4; CARD22-1_SAMN24292805_MAG_00000003-scaffold_5; CARD22-1_SAMN24292805_MAG_00000003-scaffold_6; CARD22-1_SAMN24292805_MAG_00000003-scaffold_7; CARD22-1_SAMN24292805_MAG_00000003-scaffold_8; CARD22-1_SAMN24292805_MAG_00000003-scaffold_9; CARD22-1_SAMN24292805_MAG_00000003-scaffold_10; CARD22-1_SAMN24292805_MAG_00000003-scaffold_11; CARD22-1_SAMN24292805_MAG_00000003-scaffold_12; CARD22-1_SAMN24292805_MAG_00000003-scaffold_13; CARD22-1_SAMN24292805_MAG_00000003-scaffold_14; CARD22-1_SAMN24292805_MAG_00000003-scaffold_15; CARD22-1_SAMN24292805_MAG_00000003-scaffold_16; CARD22-1_SAMN24292805_MAG_00000003-scaffold_19; CARD22-1_SAMN24292805_MAG_00000003-scaffold_20; CARD22-1_SAMN24292805_MAG_00000003-scaffold_21; CARD22-1_SAMN24292805_MAG_00000003-scaffold_22; CARD22-1_SAMN24292805_MAG_00000003-scaffold_24; CARD22-1_SAMN24292805_MAG_00000003-scaffold_25; CARD22-1_SAMN24292805_MAG_00000003-scaffold_26; CARD22-1_SAMN24292805_MAG_00000003-scaffold_28; CARD22-1_SAMN24292805_MAG_00000003-scaffold_29; CARD22-1_SAMN24292805_MAG_00000003-scaffold_30; CARD22-1_SAMN24292805_MAG_00000003-scaffold_31; CARD22-1_SAMN24292805_MAG_00000003-scaffold_32; CARD22-1_SAMN24292805_MAG_00000003-scaffold_33; CARD22-1_SAMN24292805_MAG_00000003-scaffold_34; CARD22-1_SAMN24292805_MAG_00000003-scaffold_35; CARD22-1_SAMN24292805_MAG_00000003-scaffold_36; CARD22-1_SAMN24292805_MAG_00000003-scaffold_37; CARD22-1_SAMN24292805_MAG_00000003-scaffold_38; CARD22-1_SAMN24292805_MAG_00000003-scaffold_39; CARD22-1_SAMN24292805_MAG_00000003-scaffold_40; CARD22-1_SAMN24292805_MAG_00000003-scaffold_42; CARD22-1_SAMN24292805_MAG_00000003-scaffold_43; CARD22-1_SAMN24292805_MAG_00000003-scaffold_44; CARD22-1_SAMN24292805_MAG_00000003-scaffold_45; CARD22-1_SAMN24292805_MAG_00000003-scaffold_46; CARD22-1_SAMN24292805_MAG_00000003-scaffold_47; CARD22-1_SAMN24292805_MAG_00000003-scaffold_48; CARD22-1_SAMN24292805_MAG_00000003-scaffold_50; CARD22-1_SAMN24292805_MAG_00000003-scaffold_51; CARD22-1_SAMN24292805_MAG_00000003-scaffold_52; CARD22-1_SAMN24292805_MAG_00000003-scaffold_53; CARD22-1_SAMN24292805_MAG_00000003-scaffold_54; CARD22-1_SAMN24292805_MAG_00000003-scaffold_56; CARD22-1_SAMN24292805_MAG_00000003-scaffold_57; CARD22-1_SAMN24292805_MAG_00000003-scaffold_58; CARD22-1_SAMN24292805_MAG_00000003-scaffold_59; CARD22-1_SAMN24292805_MAG_00000003-scaffold_60; CARD22-1_SAMN24292805_MAG_00000003-scaffold_61; CARD22-1_SAMN24292805_MAG_00000003-scaffold_63; CARD22-1_SAMN24292805_MAG_00000003-scaffold_64; CARD22-1_SAMN24292805_MAG_00000003-scaffold_65; CARD22-1_SAMN24292805_MAG_00000003-scaffold_66; CARD22-1_SAMN24292805_MAG_00000003-scaffold_67; CARD22-1_SAMN24292805_MAG_00000003-scaffold_68; CARD22-1_SAMN24292805_MAG_00000003-scaffold_69; CARD22-1_SAMN24292805_MAG_00000003-scaffold_70; CARD22-1_SAMN24292805_MAG_00000003-scaffold_71; CARD22-1_SAMN24292805_MAG_00000003-scaffold_72; CARD22-1_SAMN24292805_MAG_00000003-scaffold_73; CARD22-1_SAMN24292805_MAG_00000003-scaffold_74; CARD22-1_SAMN24292805_MAG_00000003-scaffold_75; CARD22-1_SAMN24292805_MAG_00000003-scaffold_76; CARD22-1_SAMN24292805_MAG_00000003-scaffold_77; CARD22-1_SAMN24292805_MAG_00000003-scaffold_78; CARD22-1_SAMN24292805_MAG_00000003-scaffold_79; CARD22-1_SAMN24292805_MAG_00000003-scaffold_80; CARD22-1_SAMN24292805_MAG_00000003-scaffold_81; CARD22-1_SAMN24292805_MAG_00000003-scaffold_82; CARD22-1_SAMN24292805_MAG_00000003-scaffold_83; CARD22-1_SAMN24292805_MAG_00000003-scaffold_84; CARD22-1_SAMN24292805_MAG_00000003-scaffold_85; CARD22-1_SAMN24292805_MAG_00000003-scaffold_86; CARD22-1_SAMN24292805_MAG_00000003-scaffold_87; CARD22-1_SAMN24292805_MAG_00000003-scaffold_88; CARD22-1_SAMN24292805_MAG_00000003-scaffold_89; CARD22-1_SAMN24292805_MAG_00000003-scaffold_90; CARD22-1_SAMN24292805_MAG_00000003-scaffold_91; CARD22-1_SAMN24292805_MAG_00000003-scaffold_93; CARD22-1_SAMN24292805_MAG_00000003-scaffold_94; CARD22-1_SAMN24292805_MAG_00000003-scaffold_95; CARD22-1_SAMN24292805_MAG_00000003-scaffold_96; CARD22-1_SAMN24292805_MAG_00000003-scaffold_98; CARD22-1_SAMN24292805_MAG_00000003-scaffold_99; CARD22-1_SAMN24292805_MAG_00000003-scaffold_100; CARD22-1_SAMN24292805_MAG_00000003-scaffold_101; CARD22-1_SAMN24292805_MAG_00000003-scaffold_102; CARD22-1_SAMN24292805_MAG_00000003-scaffold_103; CARD22-1_SAMN24292805_MAG_00000003-scaffold_104; CARD22-1_SAMN24292805_MAG_00000003-scaffold_105; CARD22-1_SAMN24292805_MAG_00000003-scaffold_106; CARD22-1_SAMN24292805_MAG_00000003-scaffold_107; CARD22-1_SAMN24292805_MAG_00000003-scaffold_108; CARD22-1_SAMN24292805_MAG_00000003-scaffold_109; CARD22-1_SAMN24292805_MAG_00000003-scaffold_110; CARD22-1_SAMN24292805_MAG_00000003-scaffold_111; CARD22-1_SAMN24292805_MAG_00000003-scaffold_112; CARD22-1_SAMN24292805_MAG_00000003-scaffold_113; CARD22-1_SAMN24292805_MAG_00000003-scaffold_114; CARD22-1_SAMN24292805_MAG_00000003-scaffold_115; CARD22-1_SAMN24292805_MAG_00000003-scaffold_116; CARD22-1_SAMN24292805_MAG_00000003-scaffold_117; CARD22-1_SAMN24292805_MAG_00000003-scaffold_118; CARD22-1_SAMN24292805_MAG_00000003-scaffold_122; CARD22-1_SAMN24292805_MAG_00000003-scaffold_123; CARD22-1_SAMN24292805_MAG_00000003-scaffold_124; CARD22-1_SAMN24292805_MAG_00000003-scaffold_125; CARD22-1_SAMN24292805_MAG_00000003-scaffold_126; CARD22-1_SAMN24292805_MAG_00000003-scaffold_127; CARD22-1_SAMN24292805_MAG_00000003-scaffold_128; CARD22-1_SAMN24292805_MAG_00000003-scaffold_129; CARD22-1_SAMN24292805_MAG_00000003-scaffold_130; CARD22-1_SAMN24292805_MAG_00000003-scaffold_131; CARD22-1_SAMN24292805_MAG_00000003-scaffold_133; CARD22-1_SAMN24292805_MAG_00000003-scaffold_134; CARD22-1_SAMN24292805_MAG_00000003-scaffold_135; CARD22-1_SAMN24292805_MAG_00000003-scaffold_136; CARD22-1_SAMN24292805_MAG_00000003-scaffold_137; CARD22-1_SAMN24292805_MAG_00000003-scaffold_138; CARD22-1_SAMN24292805_MAG_00000003-scaffold_139; CARD22-1_SAMN24292805_MAG_00000003-scaffold_140; CARD22-1_SAMN24292805_MAG_00000003-scaffold_141; CARD22-1_SAMN24292805_MAG_00000003-scaffold_142; CARD22-1_SAMN24292805_MAG_00000003-scaffold_143; CARD22-1_SAMN24292805_MAG_00000003-scaffold_144; CARD22-1_SAMN24292805_MAG_00000003-scaffold_145; CARD22-1_SAMN24292805_MAG_00000003-scaffold_146; CARD22-1_SAMN24292805_MAG_00000003-scaffold_147; CARD22-1_SAMN24292805_MAG_00000003-scaffold_148; CARD22-1_SAMN24292805_MAG_00000003-scaffold_149; CARD22-1_SAMN24292805_MAG_00000003-scaffold_150; CARD22-1_SAMN24292805_MAG_00000003-scaffold_151; CARD22-1_SAMN24292805_MAG_00000003-scaffold_152; CARD22-1_SAMN24292805_MAG_00000003-scaffold_153; CARD22-1_SAMN24292805_MAG_00000003-scaffold_154; CARD22-1_SAMN24292805_MAG_00000003-scaffold_155; CARD22-1_SAMN24292805_MAG_00000003-scaffold_156; CARD22-1_SAMN24292805_MAG_00000003-scaffold_157; CARD22-1_SAMN24292805_MAG_00000003-scaffold_158; CARD22-1_SAMN24292805_MAG_00000003-scaffold_159; CARD22-1_SAMN24292805_MAG_00000003-scaffold_160; CARD22-1_SAMN24292805_MAG_00000003-scaffold_161; CARD22-1_SAMN24292805_MAG_00000003-scaffold_162; CARD22-1_SAMN24292805_MAG_00000003-scaffold_163; CARD22-1_SAMN24292805_MAG_00000003-scaffold_164; CARD22-1_SAMN24292805_MAG_00000003-scaffold_165; CARD22-1_SAMN24292805_MAG_00000003-scaffold_166; CARD22-1_SAMN24292805_MAG_00000003-scaffold_167; CARD22-1_SAMN24292805_MAG_00000003-scaffold_168; CARD22-1_SAMN24292805_MAG_00000003-scaffold_169; CARD22-1_SAMN24292805_MAG_00000003-scaffold_170; CARD22-1_SAMN24292805_MAG_00000003-scaffold_171; CARD22-1_SAMN24292805_MAG_00000003-scaffold_173; CARD22-1_SAMN24292805_MAG_00000003-scaffold_174; CARD22-1_SAMN24292805_MAG_00000003-scaffold_175; CARD22-1_SAMN24292805_MAG_00000003-scaffold_176; CARD22-1_SAMN24292805_MAG_00000003-scaffold_177; CARD22-1_SAMN24292805_MAG_00000003-scaffold_179; CARD22-1_SAMN24292805_MAG_00000003-scaffold_180; CARD22-1_SAMN24292805_MAG_00000003-scaffold_181; CARD22-1_SAMN24292805_MAG_00000003-scaffold_182; CARD22-1_SAMN24292805_MAG_00000003-scaffold_183; CARD22-1_SAMN24292805_MAG_00000003-scaffold_184; CARD22-1_SAMN24292805_MAG_00000003-scaffold_185; CARD22-1_SAMN24292805_MAG_00000003-scaffold_186; CARD22-1_SAMN24292805_MAG_00000003-scaffold_187; CARD22-1_SAMN24292805_MAG_00000003-scaffold_188; CARD22-1_SAMN24292805_MAG_00000003-scaffold_189; CARD22-1_SAMN24292805_MAG_00000003-scaffold_190; CARD22-1_SAMN24292805_MAG_00000003-scaffold_191; CARD22-1_SAMN24292805_MAG_00000003-scaffold_192; CARD22-1_SAMN24292805_MAG_00000003-scaffold_193; CARD22-1_SAMN24292805_MAG_00000003-scaffold_194; CARD22-1_SAMN24292805_MAG_00000003-scaffold_195; CARD22-1_SAMN24292805_MAG_00000003-scaffold_196; CARD22-1_SAMN24292805_MAG_00000003-scaffold_197; CARD22-1_SAMN24292805_MAG_00000003-scaffold_198; CARD22-1_SAMN24292805_MAG_00000003-scaffold_199; CARD22-1_SAMN24292805_MAG_00000003-scaffold_200; CARD22-1_SAMN24292805_MAG_00000003-scaffold_201; CARD22-1_SAMN24292805_MAG_00000003-scaffold_202; CARD22-1_SAMN24292805_MAG_00000003-scaffold_203; CARD22-1_SAMN24292805_MAG_00000003-scaffold_204; CARD22-1_SAMN24292805_MAG_00000003-scaffold_205; CARD22-1_SAMN24292805_MAG_00000003-scaffold_206; CARD22-1_SAMN24292805_MAG_00000003-scaffold_207; CARD22-1_SAMN24292805_MAG_00000003-scaffold_208; CARD22-1_SAMN24292805_MAG_00000003-scaffold_209; CARD22-1_SAMN24292805_MAG_00000003-scaffold_210; CARD22-1_SAMN24292805_MAG_00000003-scaffold_211; CARD22-1_SAMN24292805_MAG_00000003-scaffold_212; CARD22-1_SAMN24292805_MAG_00000003-scaffold_213; CARD22-1_SAMN24292805_MAG_00000003-scaffold_214; CARD22-1_SAMN24292805_MAG_00000003-scaffold_215; CARD22-1_SAMN24292805_MAG_00000003-scaffold_216; CARD22-1_SAMN24292805_MAG_00000003-scaffold_217; CARD22-1_SAMN24292805_MAG_00000003-scaffold_218; CARD22-1_SAMN24292805_MAG_00000003-scaffold_219; CARD22-1_SAMN24292805_MAG_00000003-scaffold_220; CARD22-1_SAMN24292805_MAG_00000003-scaffold_221; CARD22-1_SAMN24292805_MAG_00000003-scaffold_222; CARD22-1_SAMN24292805_MAG_00000003-scaffold_223; CARD22-1_SAMN24292805_MAG_00000003-scaffold_224; CARD22-1_SAMN24292805_MAG_00000003-scaffold_225; CARD22-1_SAMN24292805_MAG_00000003-scaffold_226; CARD22-1_SAMN24292805_MAG_00000003-scaffold_227; CARD22-1_SAMN24292805_MAG_00000003-scaffold_228; CARD22-1_SAMN24292805_MAG_00000003-scaffold_229; CARD22-1_SAMN24292805_MAG_00000003-scaffold_230; CARD22-1_SAMN24292805_MAG_00000003-scaffold_231; CARD22-1_SAMN24292805_MAG_00000003-scaffold_232; CARD22-1_SAMN24292805_MAG_00000003-scaffold_233; CARD22-1_SAMN24292805_MAG_00000003-scaffold_234; CARD22-1_SAMN24292805_MAG_00000003-scaffold_235; CARD22-1_SAMN24292805_MAG_00000003-scaffold_236

Compact view

CARD22-1_SAMN24292805_MAG_00000003-scaffold_2 - Region 1 - thioamitides

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Location: 64,143 - 84,859 nt. (total: 20,717 nt) Show pHMM detection rules used

Region on contig edge.

thioamitides: ((YcaO or TIGR03882) and TfuA)

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CARD22-1_SAMN24292805_MAG_00000003-scaffold_17 - Region 1 - terpene

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Location: 1 - 16,214 nt. (total: 16,214 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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CARD22-1_SAMN24292805_MAG_00000003-scaffold_18 - Region 1 - arylpolyene

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Location: 1 - 24,991 nt. (total: 24,991 nt) Show pHMM detection rules used

Region on contig edge.

arylpolyene: (APE_KS1 or APE_KS2)

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core biosynthetic genes

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CARD22-1_SAMN24292805_MAG_00000003-scaffold_23 - Region 1 - T3PKS

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Location: 1 - 34,554 nt. (total: 34,554 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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CARD22-1_SAMN24292805_MAG_00000003-scaffold_27 - Region 1 - phosphonate

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Location: 7,888 - 46,477 nt. (total: 38,590 nt) Show pHMM detection rules used

Region on contig edge.

phosphonate: phosphonates

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CARD22-1_SAMN24292805_MAG_00000003-scaffold_41 - Region 1 - siderophore

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Location: 1 - 15,122 nt. (total: 15,122 nt) Show pHMM detection rules used

Region on contig edge.

siderophore: IucA_IucC

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core biosynthetic genes

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CARD22-1_SAMN24292805_MAG_00000003-scaffold_41 - Region 2 - phosphonate

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Location: 17,878 - 40,801 nt. (total: 22,924 nt) Show pHMM detection rules used

Region on contig edge.

phosphonate: phosphonates

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core biosynthetic genes

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resistance

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CARD22-1_SAMN24292805_MAG_00000003-scaffold_49 - Region 1 - NRPS,T1PKS

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Location: 1 - 37,785 nt. (total: 37,785 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))
T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

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core biosynthetic genes

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NRPS/PKS domains

NRPS/PKS modules

Detailed domain annotation

Selected features only

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Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 37785:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X - X) + (val) + (X) + (mal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

CARD22-1_SAMN24292805_MAG_00000003-scaffold_49_9

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AMP-binding (542..951): X

NRPSPredictor2: hydrophobic-aliphatic

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DLFNigvVWK
Nearest Stachelhaus code:: cys
Stachelhaus code match:: 70% (weak)

AMP-binding (1607..1998): X

NRPSPredictor2: (unknown)

SVM prediction details:

NOTE: outside applicability domain

Predicted physicochemical class:: hydrophobic-aromatic
Large clusters prediction:: phe, trp, phg, tyr, bht
Small clusters prediction:: tyr, bht
Single AA prediction:: tyr

Stachelhaus prediction details:

Stachelhaus sequence:: gDTLsSlaDK
Nearest Stachelhaus code:: ala-b
Stachelhaus code match:: 60% (weak)

CARD22-1_SAMN24292805_MAG_00000003-scaffold_49_10

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AMP-binding (201..596): val

NRPSPredictor2: val

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: val

Stachelhaus prediction details:

Stachelhaus sequence:: DAaFyGCVyK
Nearest Stachelhaus code:: leu
Stachelhaus code match:: 70% (weak)

CARD22-1_SAMN24292805_MAG_00000003-scaffold_49_15

Search NORINE for peptide: strict or relaxed

AMP-binding (1038..1443): X

NRPSPredictor2: (unknown)

SVM prediction details:

NOTE: outside applicability domain

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: vAiWvsssFK
Nearest Stachelhaus code:: val
Stachelhaus code match:: 40% (weak)

CARD22-1_SAMN24292805_MAG_00000003-scaffold_49_16

PKS_AT (538..820): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 60.7
Methylmalonyl-CoA: 40.8
Methoxymalonyl-CoA: 23.7
2-Methylbutyryl-CoA: 17.7
Ethylmalonyl-CoA: 17.6
inactive: 14.4
Propionyl-CoA: 14.1
CHC-CoA: 13.1
Benzoyl-CoA: 12.5
trans-1,2-CPDA: 0.0
fatty_acid: 0.0
Isobutyryl-CoA: 0.0
Acetyl-CoA: 0.0
3-Methylbutyryl-CoA: 0.0

CARD22-1_SAMN24292805_MAG_00000003-scaffold_55 - Region 1 - ranthipeptide

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Location: 866 - 22,295 nt. (total: 21,430 nt) Show pHMM detection rules used

ranthipeptide: (TIGR03973 or SCIFF or (cds(PF04055 and (TIGR04085 or SPASM)) and minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE]) and not (TIGR01716 or subtilosin or TIGR02111 or TIGR03966 or TIGR04103 or YcaO or TIGR03882)))

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CARD22-1_SAMN24292805_MAG_00000003-scaffold_62 - Region 1 - hserlactone

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Location: 1 - 17,424 nt. (total: 17,424 nt) Show pHMM detection rules used

Region on contig edge.

hserlactone: Autoind_synth

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CARD22-1_SAMN24292805_MAG_00000003-scaffold_92 - Region 1 - phosphonate

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Location: 121 - 24,667 nt. (total: 24,547 nt) Show pHMM detection rules used

Region on contig edge.

phosphonate: phosphonates

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CARD22-1_SAMN24292805_MAG_00000003-scaffold_97 - Region 1 - RiPP-like

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Location: 1 - 7,715 nt. (total: 7,715 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

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CARD22-1_SAMN24292805_MAG_00000003-scaffold_119 - Region 1 - NRPS

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Location: 1 - 19,328 nt. (total: 19,328 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

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NRPS/PKS domains

NRPS/PKS modules

Detailed domain annotation

Selected features only

Show module domains

Module view

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NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 19328:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

CARD22-1_SAMN24292805_MAG_00000003-scaffold_119_13

Search NORINE for peptide: strict or relaxed

CAL_domain (47..496): pk

minowa: fatty_acid

Prediction, score:

fatty_acid: 27.7
shikimic_acid: 0.0
NH2: 0.0
Acetyl-CoA: 0.0
AHBA: 0.0

AMP-binding (1246..1666): X

NRPSPredictor2: asp, asn

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: asp, asn
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DmAnmGEVaK
Nearest Stachelhaus code:: leu
Stachelhaus code match:: 60% (weak)

CARD22-1_SAMN24292805_MAG_00000003-scaffold_120 - Region 1 - NRPS

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Location: 1 - 19,264 nt. (total: 19,264 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

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NRPS/PKS domains

NRPS/PKS modules

Detailed domain annotation

Selected features only

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Module view

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NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 19264:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X - X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

CARD22-1_SAMN24292805_MAG_00000003-scaffold_120_2

Search NORINE for peptide: strict or relaxed

AMP-binding (28..449): X

NRPSPredictor2: (unknown)

SVM prediction details:

NOTE: outside applicability domain

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: orn, lys, arg
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DFgYcGGlVK
Nearest Stachelhaus code:: leu
Stachelhaus code match:: 70% (weak)

AMP-binding (1216..1643): X

NRPSPredictor2: asp, asn, glu, gln, aad

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DmAnlGEVaK
Nearest Stachelhaus code:: leu
Stachelhaus code match:: 60% (weak)

CARD22-1_SAMN24292805_MAG_00000003-scaffold_121 - Region 1 - phosphonate

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Location: 1 - 19,074 nt. (total: 19,074 nt) Show pHMM detection rules used

Region on contig edge.

phosphonate: phosphonates

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CARD22-1_SAMN24292805_MAG_00000003-scaffold_132 - Region 1 - NRPS-like

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Location: 1 - 17,641 nt. (total: 17,641 nt) Show pHMM detection rules used

Region on contig edge.

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

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NRPS/PKS domains

Detailed domain annotation

Selected features only

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CARD22-1_SAMN24292805_MAG_00000003-scaffold_172 - Region 1 - terpene

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Location: 1 - 13,006 nt. (total: 13,006 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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CARD22-1_SAMN24292805_MAG_00000003-scaffold_178 - Region 1 - resorcinol

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Location: 1 - 11,573 nt. (total: 11,573 nt) Show pHMM detection rules used

Region on contig edge.

resorcinol: DarB

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