# target name accession query name accession hmmfrom hmm to alifrom ali to envfrom env to sq len strand E-value score bias description of target # ------------------- ---------- -------------------- ---------- ------- ------- ------- ------- ------- ------- ------- ------ --------- ------ ----- --------------------- scaffold00001_23 - archaea - 4 1378 793523 794994 793520 794997 966710 + 0 1195.6 39.1 - scaffold00003_38 - archaea - 4 1378 266460 267931 266457 267934 419937 + 0 1195.6 39.1 - scaffold00001_42 - archaea - 4 1378 504734 506203 504731 506206 648970 + 0 1171.5 23.7 - scaffold00022_25 - archaea - 10 1378 1663 110 1671 107 1900 - 1.5e-223 750.3 41.6 - scaffold00016_14 - archaea - 10 1378 39526 41079 39518 41082 41188 + 1.8e-223 750.0 42.1 - scaffold00039_11 - archaea - 10 1378 87 1590 78 1593 1619 + 2.6e-221 742.8 46.2 - scaffold1.1_30 - archaea - 10 1378 4913 3402 4922 3399 831241 - 4.1e-221 742.2 39.3 - scaffold1.1_36 - archaea - 10 1378 1496410 1494899 1496419 1494896 1496668 - 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archaea - 9 149 213 40 222 15 17055 - 3.9e-07 33.7 2.5 - scaffold00020_40 - archaea - 11 157 298 3 308 1 59303 - 4e-07 33.7 1.6 - scaffold00016_11 - archaea - 10 145 61758 61929 61750 61937 61939 + 4.2e-07 33.6 2.5 - scaffold00019_9 - archaea - 10 145 182 11 190 3 59684 - 4.2e-07 33.6 2.5 - scaffold00040_22 - archaea - 9 148 5442 5614 5433 5632 5639 + 4.5e-07 33.5 2.6 - scaffold00026_31 - archaea - 9 148 19281 19453 19272 19471 19478 + 4.5e-07 33.5 2.6 - scaffold00002_67 - archaea - 11 143 540969 541151 540960 541152 541152 + 1e-06 32.3 2.2 - scaffold00016_53 - archaea - 9 137 93300 93457 93292 93458 93458 + 2.2e-06 31.2 3.2 - scaffold00058_20 - archaea - 9 137 4897 5054 4889 5055 5055 + 2.2e-06 31.2 3.2 - scaffold00008_52 - archaea - 11 138 147970 148127 147961 148129 148129 + 2.9e-06 30.8 2.3 - scaffold00004_60 - archaea - 9 135 175 3 185 1 168529 - 3.4e-06 30.6 2.4 - # # Program: nhmmer # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /usr/local/src/CheckM-1.0.7/data/hmms_ssu/SSU_archaea.hmm # Target file: - # Option settings: nhmmer -o ssu/ssu.archaea.txt --tblout ssu/ssu.archaea.table.txt --noali -E 1e-05 --cpu 8 /usr/local/src/CheckM-1.0.7/data/hmms_ssu/SSU_archaea.hmm - # Current dir: /nfs/cds-shini.ethz.ch/exports/biol_micro_cds_gr_sunagawa/scratch/hans/MG_COURSE_FALL2018/binning_checkm/metag_medium_complex # Date: Sat Oct 27 23:14:49 2018 # [ok]