# target name        accession  query name           accession  hmmfrom hmm to alifrom  ali to envfrom  env to  sq len strand   E-value  score  bias  description of target
#------------------- ---------- -------------------- ---------- ------- ------- ------- ------- ------- ------- ------- ------ --------- ------ ----- ---------------------
NZ_CP019035.1        -          silva.eukarya        -              857    1638  466207  466962  466187  466989 4609911    +       4e-82  272.9  12.8  Salmonella enterica subsp. enterica serovar Gallinarum str. 9184, complete genome
NZ_CP019035.1        -          silva.eukarya        -              857    1638  509537  510292  509517  510319 4609911    +       4e-82  272.9  12.8  Salmonella enterica subsp. enterica serovar Gallinarum str. 9184, complete genome
NZ_CP019035.1        -          silva.eukarya        -              857    1638  668794  669549  668774  669576 4609911    +       4e-82  272.9  12.8  Salmonella enterica subsp. enterica serovar Gallinarum str. 9184, complete genome
NZ_CP019035.1        -          silva.eukarya        -              857    1638  763331  764086  763311  764113 4609911    +       4e-82  272.9  12.8  Salmonella enterica subsp. enterica serovar Gallinarum str. 9184, complete genome
NZ_CP019035.1        -          silva.eukarya        -              857    1638 1449855 1450610 1449835 1450637 4609911    +       4e-82  272.9  12.8  Salmonella enterica subsp. enterica serovar Gallinarum str. 9184, complete genome
NZ_CP019035.1        -          silva.eukarya        -              857    1638 3853287 3852532 3853307 3852505 4609911    -       4e-82  272.9  12.8  Salmonella enterica subsp. enterica serovar Gallinarum str. 9184, complete genome
NZ_CP019035.1        -          silva.eukarya        -              857    1638 4558525 4557770 4558545 4557743 4609911    -       4e-82  272.9  12.8  Salmonella enterica subsp. enterica serovar Gallinarum str. 9184, complete genome
#
# Program:         nhmmer
# Version:         3.1b2 (February 2015)
# Pipeline mode:   SEARCH
# Query file:      /usr/local/src/CheckM-1.0.7/data/hmms_ssu/SSU_euk.hmm
# Target file:     -
# Option settings: nhmmer -o ssu/ssu.euk.txt --tblout ssu/ssu.euk.table.txt --noali -E 1e-05 --cpu 8 /usr/local/src/CheckM-1.0.7/data/hmms_ssu/SSU_euk.hmm - 
# Current dir:     /nfs/cds-shini.ethz.ch/exports/biol_micro_cds_gr_sunagawa/scratch/hans/MG_COURSE_FALL2018/binning_checkm/reference_genome
# Date:            Sat Oct 27 20:41:47 2018
# [ok]