# target name accession query name accession hmmfrom hmm to alifrom ali to envfrom env to sq len strand E-value score bias description of target #------------------- ---------- -------------------- ---------- ------- ------- ------- ------- ------- ------- ------- ------ --------- ------ ----- --------------------- CARPRO_18 - bacteria - 28 1514 5172 3641 5193 3631 5368 - 0 1332.9 42.8 id=20114 bin=CARPRO alias=CARPRO_23 CARSEP3_4 - bacteria - 29 1411 1460 5 1481 1 185661 - 0 1324.6 13.9 id=20220 bin=CARSEP3 alias=CARSEP3_560 CARSEP3_12 - bacteria - 29 964 1006 1 1027 1 128367 - 1e-263 879.4 15.9 id=20228 bin=CARSEP3 alias=CARSEP3_523 CARSEP3_8 - bacteria - 29 797 66306 67140 66285 67141 67141 + 3.1e-209 698.9 14.4 id=20224 bin=CARSEP3 alias=CARSEP3_507 CAREFA_8 - bacteria - 25 735 789 2 809 1 222047 - 1e-185 621.0 14.9 id=20265 bin=CAREFA alias=CAREFA_6 CARSEP3_17 - bacteria - 29 730 768 1 789 1 40854 - 4.1e-184 615.7 12.7 id=20233 bin=CARSEP3 alias=CARSEP3_528 CARSEP3_14 - bacteria - 29 703 84778 85517 84757 85517 85517 + 1.3e-176 590.8 13.3 id=20230 bin=CARSEP3 alias=CARSEP3_505 CAREFA_7 - bacteria - 25 702 63090 63843 63070 63843 63843 + 1.8e-175 587.1 14.5 id=20264 bin=CAREFA CAREFA_6 - bacteria - 26 701 752 1 773 1 280602 - 5.6e-174 582.2 14.6 id=20263 bin=CAREFA alias=CAREFA_5 CARSEP_3 - bacteria - 31 102 102 31 121 10 71143 - 2.8e-14 53.2 0.5 id=20123 bin=CARSEP alias=CARSEP_606 CARSEP_14 - bacteria - 31 102 63916 63987 63897 64008 64017 + 2.9e-14 53.2 0.7 id=20134 bin=CARSEP alias=CARSEP_661 CARSEP_10 - bacteria - 30 102 84421 84493 84402 84514 84523 + 3.1e-14 53.1 0.7 id=20130 bin=CARSEP alias=CARSEP_655 CARSEP_12 - bacteria - 30 102 103 31 122 10 83310 - 3.1e-14 53.1 0.7 id=20132 bin=CARSEP alias=CARSEP_653 CARSEP_2 - bacteria - 30 102 103 31 122 10 40512 - 3.1e-14 53.1 0.7 id=20122 bin=CARSEP alias=CARSEP_646 # # Program: nhmmer # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /usr/local/src/CheckM-1.0.7/data/hmms_ssu/SSU_bacteria.hmm # Target file: - # Option settings: nhmmer -o ssu/ssu.bacteria.txt --tblout ssu/ssu.bacteria.table.txt --noali -E 1e-05 --cpu 8 /usr/local/src/CheckM-1.0.7/data/hmms_ssu/SSU_bacteria.hmm - # Current dir: /nfs/practical/CCBioinfo/week2/contamination_w_binning # Date: Sun Oct 28 17:47:42 2018 # [ok]