# target name accession query name accession hmmfrom hmm to alifrom ali to envfrom env to sq len strand E-value score bias description of target #------------------- ---------- -------------------- ---------- ------- ------- ------- ------- ------- ------- ------- ------ --------- ------ ----- --------------------- CARPRO_18 - archaea - 10 1378 5155 3647 5165 3644 5368 - 7.3e-216 720.6 37.3 id=20114 bin=CARPRO alias=CARPRO_23 CARSEP3_4 - archaea - 10 1295 1444 20 1454 4 185661 - 1e-213 713.4 13.4 id=20220 bin=CARSEP3 alias=CARSEP3_560 CARSEP3_12 - archaea - 10 883 990 8 1000 4 128367 - 7.7e-137 459.0 15.8 id=20228 bin=CARSEP3 alias=CARSEP3_523 CARSEP3_8 - archaea - 10 715 66322 67138 66312 67141 67141 + 7.3e-100 336.5 13.8 id=20224 bin=CARSEP3 alias=CARSEP3_507 CARSEP3_17 - archaea - 10 649 752 2 762 1 40854 - 1.3e-80 272.8 12.2 id=20233 bin=CARSEP3 alias=CARSEP3_528 CAREFA_8 - archaea - 10 655 769 2 778 1 222047 - 3e-78 265.0 16.4 id=20265 bin=CAREFA alias=CAREFA_6 CARSEP3_14 - archaea - 10 622 84794 85517 84784 85517 85517 + 3.7e-76 258.0 12.7 id=20230 bin=CARSEP3 alias=CARSEP3_505 CAREFA_7 - archaea - 10 621 63110 63843 63101 63843 63843 + 3.8e-72 244.8 15.9 id=20264 bin=CAREFA CAREFA_6 - archaea - 10 620 733 1 742 1 280602 - 1.2e-71 243.1 15.9 id=20263 bin=CAREFA alias=CAREFA_5 # # Program: nhmmer # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /usr/local/src/CheckM-1.0.7/data/hmms_ssu/SSU_archaea.hmm # Target file: - # Option settings: nhmmer -o ssu/ssu.archaea.txt --tblout ssu/ssu.archaea.table.txt --noali -E 1e-05 --cpu 8 /usr/local/src/CheckM-1.0.7/data/hmms_ssu/SSU_archaea.hmm - # Current dir: /nfs/practical/CCBioinfo/week2/contamination_w_binning # Date: Sun Oct 28 17:47:43 2018 # [ok]