About¶
How to Contact Us¶
Feature requests / bug reports should be submitted via the official Github repository.
License¶
mOTUs code is published under the GPL-3.0 license.
All data in are freely available under a Creative Commons Attribution 4.0 International (CC BY 4.0) license.
How to Cite Us¶
If you find mOTUs4 useful in your work, please cite:
Dmitrijeva Marija*, Ruscheweyh Hans-Joachim*, Feer Lilith, Li Kang, Miravet-Verde Samuel, Sintsova Anna, Mende Daniel R, Zeller Georg, Sunagawa Shinichi#
Nucleic Acids Research (2024); gkae1004.
For mOTUs3:
Ruscheweyh Hans-Joachim*, Milanese Alessio*, Paoli Lucas, Karcher Nicolai, Clayssen Quentin, Keller Marisa Isabell, Wirbel Jakob, Bork Peer, Mende Daniel R, Zeller Georg#, Sunagawa Shinichi#
Microbiome (2022); 10(1):212.
For mOTUs2:
Milanese Alessio*, Mende Daniel R*, Paoli Lucas, Salazar Guillem, Ruscheweyh Hans-Joachim, Cuenca Miguelangel, Hingamp Pascal, Alves Renato, Costea Paul I, Coelho Luis Pedro, Schmidt Thomas SB, Almeida Alexandre, Mitchell Alex L, Finn Rob D, Huerta-Cepas Jaime, Bork Peer, Zeller Georg#, Sunagawa Shinichi#
Nature Communications (2019); 10(1):1014
For mOTUs1:
Sunagawa Shinichi, Mende Daniel R, Zeller Georg, Izquierdo-Carrasco Fernando, Berger Simon A, Kultima Jens Roat, Coelho Luis Pedro, Arumugam Manimozhiyan, Tap Julien, Nielsen Henrik Bjørn, Rasmussen Simon, Brunak Søren, Pedersen Oluf, Guarner Francisco, de Vos Willem M, Wang Jun, Li Junhua, Doré Joël, Ehrlich S Dusko, Stamatakis Alexandros, Bork Peer
Nature Methods (2013); 10(12):1196-9.
Protocol¶
For more information on how to run mOTUs, see:
Ruscheweyh Hans-Joachim*, Milanese Alessio*, Paoli Lucas, Sintsova Anna, Mende Daniel R, Zeller Georg#, Sunagawa Shinichi#
Current Protocols (2021); 1(8):e218.
mOTUs1¶
The codebase of the first version of mOTUs can be found here.
mOTUs is part of SIB’s portfolio of open tools and databases.
mOTUs is part of the ELIXIR-CH Service Delivery Plan.